RNA–Protein interactions for RNA: ENST00000533285.1

PAK1-218, Transcript of p21 (RAC1) activated kinase 1, humanhuman

TSL 3

Gene PAK1, Length 878 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK1-218ENST00000533285 NISCHQ9Y2I1 1504 aa13.4□□□□□ -0.26
PAK1-218ENST00000533285 ABCC9O60706 1549 aa12.27□□□□□ -0.45
PAK1-218ENST00000533285 CCDC180Q9P1Z9 1646 aa12.04□□□□□ -0.48
PAK1-218ENST00000533285 CHIC1Q5VXU3 224 aa11.81□□□□□ -0.52
PAK1-218ENST00000533285 AEBP2Q6ZN18 517 aaPredicted RBP11.61□□□□□ -0.55
PAK1-218ENST00000533285 DNAJC5BQ9UF47 199 aa11.57□□□□□ -0.56
PAK1-218ENST00000533285 RB1CC1Q8TDY2 1594 aa11.56□□□□□ -0.56
PAK1-218ENST00000533285 DCAF8L2P0C7V8 631 aa11.54□□□□□ -0.56
PAK1-218ENST00000533285 PABPN1Q86U42 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
PAK1-218ENST00000533285 NACADO15069 1562 aa11.42□□□□□ -0.58
PAK1-218ENST00000533285 UNC13AQ9UPW8 1703 aa11.26□□□□□ -0.61
PAK1-218ENST00000533285 BICRAQ9NZM4 1560 aa11.2□□□□□ -0.62
PAK1-218ENST00000533285 MYO15BQ96JP2 1530 aa11.17□□□□□ -0.62
PAK1-218ENST00000533285 ZCCHC6Q5VYS8 1495 aaKnown RBP11.08□□□□□ -0.64
PAK1-218ENST00000533285 SCRIBQ14160 1630 aa11.06□□□□□ -0.64
PAK1-218ENST00000533285 CECR2Q9BXF3 1484 aa11.03□□□□□ -0.64
PAK1-218ENST00000533285 CC2D2AQ9P2K1 1620 aa11.02□□□□□ -0.64
PAK1-218ENST00000533285 DCAF1Q9Y4B6 1507 aa11□□□□□ -0.65
PAK1-218ENST00000533285 SHROOM4Q9ULL8 1493 aa10.99□□□□□ -0.65
PAK1-218ENST00000533285 EIF4G1Q04637 1599 aaKnown RBP10.96□□□□□ -0.65
PAK1-218ENST00000533285 DNAJC5Q9H3Z4 198 aa10.68□□□□□ -0.7
PAK1-218ENST00000533285 ERCC6Q03468 1493 aa10.61□□□□□ -0.71
PAK1-218ENST00000533285 NCAPD3P42695 1498 aa10.55□□□□□ -0.72
PAK1-218ENST00000533285 CUX2O14529 1486 aa10.54□□□□□ -0.72
PAK1-218ENST00000533285 ATAD2BQ9ULI0 1458 aa10.53□□□□□ -0.72
PAK1-218ENST00000533285 NESP48681 1621 aa10.49□□□□□ -0.73
PAK1-218ENST00000533285 SMARCA4P51532 1647 aa10.49□□□□□ -0.73
PAK1-218ENST00000533285 SMARCA2P51531 1590 aa10.48□□□□□ -0.73
PAK1-218ENST00000533285 HMGXB3Q12766 1538 aa10.46□□□□□ -0.74
PAK1-218ENST00000533285 BAZ1BQ9UIG0 1483 aaKnown RBP10.45□□□□□ -0.74
PAK1-218ENST00000533285 BAZ1AQ9NRL2 1556 aaPredicted RBP10.42□□□□□ -0.74
PAK1-218ENST00000533285 PHF23Q9BUL5 403 aaPredicted RBP10.39□□□□□ -0.75
PAK1-218ENST00000533285 MROH2BQ7Z745 1585 aa10.35□□□□□ -0.75
PAK1-218ENST00000533285 THOC2Q8NI27 1593 aaKnown RBP10.35□□□□□ -0.75
PAK1-218ENST00000533285 LAMC3Q9Y6N6 1575 aa10.34□□□□□ -0.75
PAK1-218ENST00000533285 PEG3Q9GZU2 1588 aa10.33□□□□□ -0.76
PAK1-218ENST00000533285 PDS5BQ9NTI5 1447 aa10.32□□□□□ -0.76
PAK1-218ENST00000533285 KIF21AQ7Z4S6 1674 aa10.31□□□□□ -0.76
PAK1-218ENST00000533285 TRIM41Q8WV44 630 aa10.29□□□□□ -0.76
PAK1-218ENST00000533285 CADPSQ9ULU8 1353 aa10.26□□□□□ -0.77
PAK1-218ENST00000533285 WIZO95785 1651 aa10.24□□□□□ -0.77
PAK1-218ENST00000533285 MRC2Q9UBG0 1479 aa10.23□□□□□ -0.77
PAK1-218ENST00000533285 WDR62O43379 1518 aa10.18□□□□□ -0.78
PAK1-218ENST00000533285 CEP164Q9UPV0 1460 aa10.18□□□□□ -0.78
PAK1-218ENST00000533285 FANCD2Q9BXW9 1451 aa10.16□□□□□ -0.78
PAK1-218ENST00000533285 OSCARQ8IYS5 282 aa10.1□□□□□ -0.79
PAK1-218ENST00000533285 CFTRP13569 1480 aa10.1□□□□□ -0.79
PAK1-218ENST00000533285 RSF1Q96T23 1441 aaPredicted RBP10.09□□□□□ -0.79
PAK1-218ENST00000533285 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
PAK1-218ENST00000533285 URB2Q14146 1524 aaKnown RBP10.07□□□□□ -0.8
PAK1-218ENST00000533285 ZNF608Q9ULD9 1512 aaPredicted RBP9.98□□□□□ -0.81
PAK1-218ENST00000533285 CCDC88BA6NC98 1476 aa9.98□□□□□ -0.81
PAK1-218ENST00000533285 IFT140Q96RY7 1462 aa9.96□□□□□ -0.82
PAK1-218ENST00000533285 RIMBP3CA6NJZ7 1639 aa9.95□□□□□ -0.82
PAK1-218ENST00000533285 RIMBP3BA6NNM3 1639 aa9.95□□□□□ -0.82
PAK1-218ENST00000533285 RIMBP3Q9UFD9 1639 aa9.95□□□□□ -0.82
PAK1-218ENST00000533285 PRDM2Q13029 1718 aa9.95□□□□□ -0.82
PAK1-218ENST00000533285 TOPBP1Q92547 1522 aa9.94□□□□□ -0.82
PAK1-218ENST00000533285 FBLN2P98095 1184 aa9.93□□□□□ -0.82
PAK1-218ENST00000533285 ARHGEF11O15085 1522 aa9.92□□□□□ -0.82
PAK1-218ENST00000533285 CYB5RLQ6IPT4 315 aa9.91□□□□□ -0.82
PAK1-218ENST00000533285 EIF4G3O43432 1585 aaKnown RBP9.91□□□□□ -0.82
PAK1-218ENST00000533285 AQRO60306 1485 aaKnown RBP eCLIP9.9□□□□□ -0.83
PAK1-218ENST00000533285 TRHP20396 242 aaPredicted RBP9.89□□□□□ -0.83
PAK1-218ENST00000533285 ABCC8Q09428 1581 aa9.88□□□□□ -0.83
PAK1-218ENST00000533285 DNMBPQ6XZF7 1577 aa9.88□□□□□ -0.83
PAK1-218ENST00000533285 SENP3Q9H4L4 574 aaPredicted RBP9.87□□□□□ -0.83
PAK1-218ENST00000533285 CHD1O14646 1710 aa9.85□□□□□ -0.83
PAK1-218ENST00000533285 POLA1P09884 1462 aaPredicted RBP9.84□□□□□ -0.83
PAK1-218ENST00000533285 RAD54L2Q9Y4B4 1467 aa9.84□□□□□ -0.83
PAK1-218ENST00000533285 TARBP1Q13395 1621 aaKnown RBP9.83□□□□□ -0.84
PAK1-218ENST00000533285 TDRD9Q8NDG6 1382 aaKnown RBP9.83□□□□□ -0.84
PAK1-218ENST00000533285 SOGA1O94964 1423 aa9.82□□□□□ -0.84
PAK1-218ENST00000533285 PLPPR3Q6T4P5 718 aa9.81□□□□□ -0.84
PAK1-218ENST00000533285 ARAP1Q96P48 1450 aa9.8□□□□□ -0.84
PAK1-218ENST00000533285 CHMP7Q8WUX9 453 aaPredicted RBP9.79□□□□□ -0.84
PAK1-218ENST00000533285 SNAPC4Q5SXM2 1469 aa9.79□□□□□ -0.84
PAK1-218ENST00000533285 FGD5Q6ZNL6 1462 aa9.78□□□□□ -0.84
PAK1-218ENST00000533285 CUX1P39880 1505 aa9.73□□□□□ -0.85
PAK1-218ENST00000533285 SYNJ1O43426 1573 aa9.72□□□□□ -0.85
PAK1-218ENST00000533285 GRIN2BQ13224 1484 aa9.72□□□□□ -0.85
PAK1-218ENST00000533285 MAGI1Q96QZ7 1491 aaPredicted RBP9.71□□□□□ -0.86
PAK1-218ENST00000533285 CLASP1Q7Z460 1538 aa9.71□□□□□ -0.86
PAK1-218ENST00000533285 SUPT5HO00267 1087 aaKnown RBP9.7□□□□□ -0.86
PAK1-218ENST00000533285 SYNJ2O15056 1496 aa9.7□□□□□ -0.86
PAK1-218ENST00000533285 WDR97A6NE52 1622 aa9.68□□□□□ -0.86
PAK1-218ENST00000533285 GAPVD1Q14C86 1478 aa9.68□□□□□ -0.86
PAK1-218ENST00000533285 PBRM1Q86U86 1689 aa9.67□□□□□ -0.86
PAK1-218ENST00000533285 ABCA10Q8WWZ4 1543 aa9.61□□□□□ -0.87
PAK1-218ENST00000533285 ABCA5Q8WWZ7 1642 aa9.61□□□□□ -0.87
PAK1-218ENST00000533285 GRIN2AQ12879 1464 aa9.59□□□□□ -0.87
PAK1-218ENST00000533285 ERCC6L2Q5T890 1561 aa9.59□□□□□ -0.87
PAK1-218ENST00000533285 WRNQ14191 1432 aaPredicted RBP eCLIP9.59□□□□□ -0.87
PAK1-218ENST00000533285 ADAMTS12P58397 1594 aa9.57□□□□□ -0.88
PAK1-218ENST00000533285 CEP170Q5SW79 1584 aa9.56□□□□□ -0.88
PAK1-218ENST00000533285 FHAD1B1AJZ9 1412 aa9.54□□□□□ -0.88
PAK1-218ENST00000533285 NUP160Q12769 1436 aa9.53□□□□□ -0.88
PAK1-218ENST00000533285 TOP2BQ02880 1626 aa9.53□□□□□ -0.88
PAK1-218ENST00000533285 PRG4Q92954 1404 aaPredicted RBP9.51□□□□□ -0.89
PAK1-218ENST00000533285 BIVM-ERCC5R4GMW8 1640 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms