RNA–Protein interactions for RNA: ENST00000533282.1

FOXR1-203, Transcript of forkhead box R1, humanhuman

TSL 2

Gene FOXR1, Length 409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-203ENST00000533282 NISCHQ9Y2I1 1504 aa21.36■■□□□ 1.01
FOXR1-203ENST00000533282 CCDC180Q9P1Z9 1646 aa19.07■□□□□ 0.64
FOXR1-203ENST00000533282 ABCC9O60706 1549 aa18.86■□□□□ 0.61
FOXR1-203ENST00000533282 AEBP2Q6ZN18 517 aaPredicted RBP18.31■□□□□ 0.52
FOXR1-203ENST00000533282 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.48
FOXR1-203ENST00000533282 DCAF8L2P0C7V8 631 aa18.04■□□□□ 0.48
FOXR1-203ENST00000533282 NACADO15069 1562 aa18■□□□□ 0.47
FOXR1-203ENST00000533282 MYO15BQ96JP2 1530 aa17.81■□□□□ 0.44
FOXR1-203ENST00000533282 ZCCHC6Q5VYS8 1495 aaKnown RBP17.75■□□□□ 0.43
FOXR1-203ENST00000533282 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
FOXR1-203ENST00000533282 PABPN1Q86U42 306 aaKnown RBP eCLIP17.6■□□□□ 0.41
FOXR1-203ENST00000533282 UNC13AQ9UPW8 1703 aa17.54■□□□□ 0.4
FOXR1-203ENST00000533282 BICRAQ9NZM4 1560 aa17.45■□□□□ 0.38
FOXR1-203ENST00000533282 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
FOXR1-203ENST00000533282 SCRIBQ14160 1630 aa17.4■□□□□ 0.38
FOXR1-203ENST00000533282 SHROOM4Q9ULL8 1493 aa17.34■□□□□ 0.37
FOXR1-203ENST00000533282 CHIC1Q5VXU3 224 aa17.09■□□□□ 0.33
FOXR1-203ENST00000533282 EIF4G1Q04637 1599 aaKnown RBP17.06■□□□□ 0.32
FOXR1-203ENST00000533282 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
FOXR1-203ENST00000533282 CECR2Q9BXF3 1484 aa16.98■□□□□ 0.31
FOXR1-203ENST00000533282 SMARCA4P51532 1647 aa16.61■□□□□ 0.25
FOXR1-203ENST00000533282 NCAPD3P42695 1498 aa16.6■□□□□ 0.25
FOXR1-203ENST00000533282 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
FOXR1-203ENST00000533282 SMARCA2P51531 1590 aa16.58■□□□□ 0.24
FOXR1-203ENST00000533282 ATAD2BQ9ULI0 1458 aa16.57■□□□□ 0.24
FOXR1-203ENST00000533282 HMGXB3Q12766 1538 aa16.5■□□□□ 0.23
FOXR1-203ENST00000533282 BAZ1BQ9UIG0 1483 aaKnown RBP16.47■□□□□ 0.23
FOXR1-203ENST00000533282 MROH2BQ7Z745 1585 aa16.44■□□□□ 0.22
FOXR1-203ENST00000533282 PEG3Q9GZU2 1588 aa16.43■□□□□ 0.22
FOXR1-203ENST00000533282 ERCC6Q03468 1493 aa16.34■□□□□ 0.21
FOXR1-203ENST00000533282 WIZO95785 1651 aa16.24■□□□□ 0.19
FOXR1-203ENST00000533282 NESP48681 1621 aa16.23■□□□□ 0.19
FOXR1-203ENST00000533282 RSF1Q96T23 1441 aaPredicted RBP16.2■□□□□ 0.18
FOXR1-203ENST00000533282 LAMC3Q9Y6N6 1575 aa16.2■□□□□ 0.18
FOXR1-203ENST00000533282 CUX2O14529 1486 aa16.18■□□□□ 0.18
FOXR1-203ENST00000533282 PDS5BQ9NTI5 1447 aa16.14■□□□□ 0.17
FOXR1-203ENST00000533282 CADPSQ9ULU8 1353 aa16.13■□□□□ 0.17
FOXR1-203ENST00000533282 TOP2AP11388 1531 aaKnown RBP16.1■□□□□ 0.17
FOXR1-203ENST00000533282 KIF21AQ7Z4S6 1674 aa16.02■□□□□ 0.16
FOXR1-203ENST00000533282 THOC2Q8NI27 1593 aaKnown RBP16.01■□□□□ 0.15
FOXR1-203ENST00000533282 CFTRP13569 1480 aa15.97■□□□□ 0.15
FOXR1-203ENST00000533282 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
FOXR1-203ENST00000533282 MRC2Q9UBG0 1479 aa15.96■□□□□ 0.14
FOXR1-203ENST00000533282 FANCD2Q9BXW9 1451 aa15.94■□□□□ 0.14
FOXR1-203ENST00000533282 CCDC88BA6NC98 1476 aa15.91■□□□□ 0.14
FOXR1-203ENST00000533282 POTEDQ86YR6 584 aa15.89■□□□□ 0.13
FOXR1-203ENST00000533282 DNAJC5Q9H3Z4 198 aa15.89■□□□□ 0.13
FOXR1-203ENST00000533282 WDR62O43379 1518 aa15.88■□□□□ 0.13
FOXR1-203ENST00000533282 SENP3Q9H4L4 574 aaPredicted RBP15.81■□□□□ 0.12
FOXR1-203ENST00000533282 PRDM2Q13029 1718 aa15.79■□□□□ 0.12
FOXR1-203ENST00000533282 URB2Q14146 1524 aaKnown RBP15.75■□□□□ 0.11
FOXR1-203ENST00000533282 SUPT5HO00267 1087 aaKnown RBP15.74■□□□□ 0.11
FOXR1-203ENST00000533282 ABCC8Q09428 1581 aa15.69■□□□□ 0.1
FOXR1-203ENST00000533282 TOPBP1Q92547 1522 aa15.64■□□□□ 0.09
FOXR1-203ENST00000533282 IFT140Q96RY7 1462 aa15.63■□□□□ 0.09
FOXR1-203ENST00000533282 DNMBPQ6XZF7 1577 aa15.62■□□□□ 0.09
FOXR1-203ENST00000533282 ZNF608Q9ULD9 1512 aaPredicted RBP15.52■□□□□ 0.07
FOXR1-203ENST00000533282 OSCARQ8IYS5 282 aa15.51■□□□□ 0.07
FOXR1-203ENST00000533282 POLA1P09884 1462 aaPredicted RBP15.5■□□□□ 0.07
FOXR1-203ENST00000533282 SOGA1O94964 1423 aa15.47■□□□□ 0.07
FOXR1-203ENST00000533282 EIF4G3O43432 1585 aaKnown RBP15.46■□□□□ 0.07
FOXR1-203ENST00000533282 TARBP1Q13395 1621 aaKnown RBP15.46■□□□□ 0.06
FOXR1-203ENST00000533282 FGD5Q6ZNL6 1462 aa15.45■□□□□ 0.06
FOXR1-203ENST00000533282 CUX1P39880 1505 aa15.44■□□□□ 0.06
FOXR1-203ENST00000533282 AQRO60306 1485 aaKnown RBP eCLIP15.43■□□□□ 0.06
FOXR1-203ENST00000533282 RAD54L2Q9Y4B4 1467 aa15.43■□□□□ 0.06
FOXR1-203ENST00000533282 PHF23Q9BUL5 403 aaPredicted RBP15.41■□□□□ 0.06
FOXR1-203ENST00000533282 TDRD9Q8NDG6 1382 aaKnown RBP15.39■□□□□ 0.05
FOXR1-203ENST00000533282 WDR97A6NE52 1622 aa15.38■□□□□ 0.05
FOXR1-203ENST00000533282 FBLN2P98095 1184 aa15.37■□□□□ 0.05
FOXR1-203ENST00000533282 TRIM41Q8WV44 630 aa15.35■□□□□ 0.05
FOXR1-203ENST00000533282 WRNQ14191 1432 aaPredicted RBP eCLIP15.33■□□□□ 0.04
FOXR1-203ENST00000533282 GRIN2BQ13224 1484 aa15.31■□□□□ 0.04
FOXR1-203ENST00000533282 SNAPC4Q5SXM2 1469 aa15.3■□□□□ 0.04
FOXR1-203ENST00000533282 CHMP7Q8WUX9 453 aaPredicted RBP15.29■□□□□ 0.04
FOXR1-203ENST00000533282 ABCA10Q8WWZ4 1543 aa15.28■□□□□ 0.04
FOXR1-203ENST00000533282 GAPVD1Q14C86 1478 aa15.28■□□□□ 0.04
FOXR1-203ENST00000533282 MAGI1Q96QZ7 1491 aaPredicted RBP15.28■□□□□ 0.04
FOXR1-203ENST00000533282 CHD1O14646 1710 aa15.28■□□□□ 0.04
FOXR1-203ENST00000533282 TOP2BQ02880 1626 aa15.27■□□□□ 0.03
FOXR1-203ENST00000533282 BIVM-ERCC5R4GMW8 1640 aa15.26■□□□□ 0.03
FOXR1-203ENST00000533282 SYNJ1O43426 1573 aa15.24■□□□□ 0.03
FOXR1-203ENST00000533282 SYNJ2O15056 1496 aa15.22■□□□□ 0.03
FOXR1-203ENST00000533282 PBRM1Q86U86 1689 aa15.22■□□□□ 0.03
FOXR1-203ENST00000533282 RIMBP3CA6NJZ7 1639 aa15.21■□□□□ 0.03
FOXR1-203ENST00000533282 RIMBP3BA6NNM3 1639 aa15.21■□□□□ 0.03
FOXR1-203ENST00000533282 ABCA5Q8WWZ7 1642 aa15.21■□□□□ 0.03
FOXR1-203ENST00000533282 RIMBP3Q9UFD9 1639 aa15.21■□□□□ 0.03
FOXR1-203ENST00000533282 ARHGEF11O15085 1522 aa15.21■□□□□ 0.03
FOXR1-203ENST00000533282 CYB5RLQ6IPT4 315 aa15.12■□□□□ 0.01
FOXR1-203ENST00000533282 CLASP1Q7Z460 1538 aa15.12■□□□□ 0.01
FOXR1-203ENST00000533282 ERICH3Q5RHP9 1530 aa15.11■□□□□ 0.01
FOXR1-203ENST00000533282 FHAD1B1AJZ9 1412 aa15.1■□□□□ 0.01
FOXR1-203ENST00000533282 ADAMTS12P58397 1594 aa15.1■□□□□ 0.01
FOXR1-203ENST00000533282 GRIN2AQ12879 1464 aa15.09■□□□□ 0.01
FOXR1-203ENST00000533282 ARAP1Q96P48 1450 aa15.06■□□□□ 0
FOXR1-203ENST00000533282 KIF27Q86VH2 1401 aa15.04■□□□□ -0
FOXR1-203ENST00000533282 NUP160Q12769 1436 aa15.01□□□□□ -0.01
FOXR1-203ENST00000533282 CEP170Q5SW79 1584 aa14.99□□□□□ -0.01
FOXR1-203ENST00000533282 IGF1RP08069 1367 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms