RNA–Protein interactions for RNA: ENST00000533258.5

MMP8-206, Transcript of matrix metallopeptidase 8, humanhuman

TSL 3

Gene MMP8, Length 707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8-206ENST00000533258 NISCHQ9Y2I1 1504 aa22.24■■□□□ 1.15
MMP8-206ENST00000533258 ABCC9O60706 1549 aa21.2■□□□□ 0.98
MMP8-206ENST00000533258 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
MMP8-206ENST00000533258 AEBP2Q6ZN18 517 aaPredicted RBP20.61■□□□□ 0.89
MMP8-206ENST00000533258 CCDC180Q9P1Z9 1646 aa20.31■□□□□ 0.84
MMP8-206ENST00000533258 CHIC1Q5VXU3 224 aa20.25■□□□□ 0.83
MMP8-206ENST00000533258 RB1CC1Q8TDY2 1594 aa19.77■□□□□ 0.76
MMP8-206ENST00000533258 DNAJC5Q9H3Z4 198 aa19.74■□□□□ 0.75
MMP8-206ENST00000533258 PABPN1Q86U42 306 aaKnown RBP eCLIP19.61■□□□□ 0.73
MMP8-206ENST00000533258 NACADO15069 1562 aa19.44■□□□□ 0.7
MMP8-206ENST00000533258 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
MMP8-206ENST00000533258 BICRAQ9NZM4 1560 aa19.31■□□□□ 0.68
MMP8-206ENST00000533258 CECR2Q9BXF3 1484 aa19.2■□□□□ 0.66
MMP8-206ENST00000533258 CC2D2AQ9P2K1 1620 aa19.12■□□□□ 0.65
MMP8-206ENST00000533258 DCAF8L2P0C7V8 631 aa19.08■□□□□ 0.64
MMP8-206ENST00000533258 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
MMP8-206ENST00000533258 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
MMP8-206ENST00000533258 EIF4G1Q04637 1599 aaKnown RBP18.86■□□□□ 0.61
MMP8-206ENST00000533258 CUX2O14529 1486 aa18.65■□□□□ 0.58
MMP8-206ENST00000533258 SCRIBQ14160 1630 aa18.43■□□□□ 0.54
MMP8-206ENST00000533258 TRIM41Q8WV44 630 aa18.4■□□□□ 0.54
MMP8-206ENST00000533258 DCAF1Q9Y4B6 1507 aa18.33■□□□□ 0.52
MMP8-206ENST00000533258 ERCC6Q03468 1493 aa18.33■□□□□ 0.52
MMP8-206ENST00000533258 ZCCHC6Q5VYS8 1495 aaKnown RBP18.22■□□□□ 0.51
MMP8-206ENST00000533258 NCAPD3P42695 1498 aa18■□□□□ 0.47
MMP8-206ENST00000533258 NESP48681 1621 aa17.99■□□□□ 0.47
MMP8-206ENST00000533258 THOC2Q8NI27 1593 aaKnown RBP17.97■□□□□ 0.47
MMP8-206ENST00000533258 ATAD2BQ9ULI0 1458 aa17.79■□□□□ 0.44
MMP8-206ENST00000533258 PHF23Q9BUL5 403 aaPredicted RBP17.76■□□□□ 0.43
MMP8-206ENST00000533258 HMGXB3Q12766 1538 aa17.74■□□□□ 0.43
MMP8-206ENST00000533258 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
MMP8-206ENST00000533258 KIF21AQ7Z4S6 1674 aa17.69■□□□□ 0.42
MMP8-206ENST00000533258 LAMC3Q9Y6N6 1575 aa17.69■□□□□ 0.42
MMP8-206ENST00000533258 OSCARQ8IYS5 282 aa17.66■□□□□ 0.42
MMP8-206ENST00000533258 BAZ1AQ9NRL2 1556 aaPredicted RBP17.65■□□□□ 0.42
MMP8-206ENST00000533258 PDS5BQ9NTI5 1447 aa17.61■□□□□ 0.41
MMP8-206ENST00000533258 SENP3Q9H4L4 574 aaPredicted RBP17.57■□□□□ 0.4
MMP8-206ENST00000533258 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.4
MMP8-206ENST00000533258 RIMBP3CA6NJZ7 1639 aa17.52■□□□□ 0.4
MMP8-206ENST00000533258 RIMBP3BA6NNM3 1639 aa17.52■□□□□ 0.4
MMP8-206ENST00000533258 SMARCA4P51532 1647 aa17.52■□□□□ 0.4
MMP8-206ENST00000533258 RIMBP3Q9UFD9 1639 aa17.52■□□□□ 0.4
MMP8-206ENST00000533258 WDR62O43379 1518 aa17.52■□□□□ 0.39
MMP8-206ENST00000533258 MRC2Q9UBG0 1479 aa17.51■□□□□ 0.39
MMP8-206ENST00000533258 PEG3Q9GZU2 1588 aa17.39■□□□□ 0.37
MMP8-206ENST00000533258 CADPSQ9ULU8 1353 aa17.39■□□□□ 0.37
MMP8-206ENST00000533258 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
MMP8-206ENST00000533258 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
MMP8-206ENST00000533258 CYB5RLQ6IPT4 315 aa17.3■□□□□ 0.36
MMP8-206ENST00000533258 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
MMP8-206ENST00000533258 FANCD2Q9BXW9 1451 aa17.17■□□□□ 0.34
MMP8-206ENST00000533258 ARAP1Q96P48 1450 aa17.16■□□□□ 0.34
MMP8-206ENST00000533258 MROH2BQ7Z745 1585 aa17.13■□□□□ 0.33
MMP8-206ENST00000533258 URB2Q14146 1524 aaKnown RBP17.11■□□□□ 0.33
MMP8-206ENST00000533258 ZNF608Q9ULD9 1512 aaPredicted RBP17.05■□□□□ 0.32
MMP8-206ENST00000533258 CFTRP13569 1480 aa17■□□□□ 0.31
MMP8-206ENST00000533258 ILDR1Q86SU0 546 aaPredicted RBP16.99■□□□□ 0.31
MMP8-206ENST00000533258 RSF1Q96T23 1441 aaPredicted RBP16.97■□□□□ 0.31
MMP8-206ENST00000533258 IFT140Q96RY7 1462 aa16.95■□□□□ 0.3
MMP8-206ENST00000533258 CHD1O14646 1710 aa16.92■□□□□ 0.3
MMP8-206ENST00000533258 EIF4G3O43432 1585 aaKnown RBP16.86■□□□□ 0.29
MMP8-206ENST00000533258 WIZO95785 1651 aa16.86■□□□□ 0.29
MMP8-206ENST00000533258 FBLN2P98095 1184 aa16.78■□□□□ 0.28
MMP8-206ENST00000533258 AQRO60306 1485 aaKnown RBP eCLIP16.77■□□□□ 0.28
MMP8-206ENST00000533258 TOPBP1Q92547 1522 aa16.75■□□□□ 0.27
MMP8-206ENST00000533258 CLASP1Q7Z460 1538 aa16.74■□□□□ 0.27
MMP8-206ENST00000533258 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
MMP8-206ENST00000533258 TARBP1Q13395 1621 aaKnown RBP16.69■□□□□ 0.26
MMP8-206ENST00000533258 ABCC8Q09428 1581 aa16.63■□□□□ 0.25
MMP8-206ENST00000533258 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
MMP8-206ENST00000533258 KDM4FA0A1W2PPD8 638 aa16.59■□□□□ 0.25
MMP8-206ENST00000533258 DNMBPQ6XZF7 1577 aa16.59■□□□□ 0.25
MMP8-206ENST00000533258 SYNJ1O43426 1573 aa16.58■□□□□ 0.24
MMP8-206ENST00000533258 TOP2AP11388 1531 aaKnown RBP16.56■□□□□ 0.24
MMP8-206ENST00000533258 SNAPC4Q5SXM2 1469 aa16.54■□□□□ 0.24
MMP8-206ENST00000533258 CHMP7Q8WUX9 453 aaPredicted RBP16.52■□□□□ 0.24
MMP8-206ENST00000533258 POLA1P09884 1462 aaPredicted RBP16.52■□□□□ 0.23
MMP8-206ENST00000533258 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
MMP8-206ENST00000533258 KIF13AQ9H1H9 1805 aa16.51■□□□□ 0.23
MMP8-206ENST00000533258 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
MMP8-206ENST00000533258 RAD54L2Q9Y4B4 1467 aa16.48■□□□□ 0.23
MMP8-206ENST00000533258 MAGI1Q96QZ7 1491 aaPredicted RBP16.47■□□□□ 0.23
MMP8-206ENST00000533258 SYNJ2O15056 1496 aa16.43■□□□□ 0.22
MMP8-206ENST00000533258 SOGA1O94964 1423 aa16.42■□□□□ 0.22
MMP8-206ENST00000533258 ERCC6L2Q5T890 1561 aa16.42■□□□□ 0.22
MMP8-206ENST00000533258 CCDC88BA6NC98 1476 aa16.42■□□□□ 0.22
MMP8-206ENST00000533258 WDR97A6NE52 1622 aa16.41■□□□□ 0.22
MMP8-206ENST00000533258 GRIN2BQ13224 1484 aa16.37■□□□□ 0.21
MMP8-206ENST00000533258 FAM69CQ0P6D2 419 aa16.28■□□□□ 0.2
MMP8-206ENST00000533258 CEP170Q5SW79 1584 aa16.28■□□□□ 0.2
MMP8-206ENST00000533258 ABCC10Q5T3U5 1492 aa16.28■□□□□ 0.2
MMP8-206ENST00000533258 FGD5Q6ZNL6 1462 aa16.27■□□□□ 0.19
MMP8-206ENST00000533258 KDM6BO15054 1643 aa16.27■□□□□ 0.19
MMP8-206ENST00000533258 HECW2Q9P2P5 1572 aa16.26■□□□□ 0.19
MMP8-206ENST00000533258 FBXO41Q8TF61 875 aa16.24■□□□□ 0.19
MMP8-206ENST00000533258 PBRM1Q86U86 1689 aa16.23■□□□□ 0.19
MMP8-206ENST00000533258 FOXD1Q16676 465 aa16.22■□□□□ 0.19
MMP8-206ENST00000533258 SHROOM2Q13796 1616 aa16.21■□□□□ 0.19
MMP8-206ENST00000533258 DIP2BQ9P265 1576 aa16.2■□□□□ 0.18
MMP8-206ENST00000533258 ADGRL1O94910 1474 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms