RNA–Protein interactions for RNA: ENST00000533239.1

DDX6-205, Transcript of DEAD-box helicase 6, humanhuman

TSL 2

Gene DDX6, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX6-205ENST00000533239 NISCHQ9Y2I1 1504 aa41.37■■■■■ 4.21
DDX6-205ENST00000533239 ABCC9O60706 1549 aa37.43■■■■□ 3.58
DDX6-205ENST00000533239 CCDC180Q9P1Z9 1646 aa37.1■■■■□ 3.53
DDX6-205ENST00000533239 RB1CC1Q8TDY2 1594 aa35.48■■■■□ 3.27
DDX6-205ENST00000533239 DCAF8L2P0C7V8 631 aa35.25■■■■□ 3.23
DDX6-205ENST00000533239 DNAJC5BQ9UF47 199 aa35.25■■■■□ 3.23
DDX6-205ENST00000533239 NACADO15069 1562 aa35.17■■■■□ 3.22
DDX6-205ENST00000533239 PABPN1Q86U42 306 aaKnown RBP eCLIP34.89■■■■□ 3.18
DDX6-205ENST00000533239 MYO15BQ96JP2 1530 aa34.58■■■■□ 3.13
DDX6-205ENST00000533239 UNC13AQ9UPW8 1703 aa34.57■■■■□ 3.12
DDX6-205ENST00000533239 BICRAQ9NZM4 1560 aa34.4■■■■□ 3.1
DDX6-205ENST00000533239 ZCCHC6Q5VYS8 1495 aaKnown RBP34.22■■■■□ 3.07
DDX6-205ENST00000533239 DCAF1Q9Y4B6 1507 aa34.09■■■■□ 3.05
DDX6-205ENST00000533239 SCRIBQ14160 1630 aa33.92■■■■□ 3.02
DDX6-205ENST00000533239 SHROOM4Q9ULL8 1493 aa33.89■■■■□ 3.02
DDX6-205ENST00000533239 CC2D2AQ9P2K1 1620 aa33.72■■■□□ 2.99
DDX6-205ENST00000533239 CECR2Q9BXF3 1484 aa33.7■■■□□ 2.99
DDX6-205ENST00000533239 EIF4G1Q04637 1599 aaKnown RBP33.6■■■□□ 2.97
DDX6-205ENST00000533239 NCAPD3P42695 1498 aa32.49■■■□□ 2.79
DDX6-205ENST00000533239 DNAJC5Q9H3Z4 198 aa32.48■■■□□ 2.79
DDX6-205ENST00000533239 ATAD2BQ9ULI0 1458 aa32.39■■■□□ 2.78
DDX6-205ENST00000533239 ERCC6Q03468 1493 aa32.35■■■□□ 2.77
DDX6-205ENST00000533239 SMARCA4P51532 1647 aa32.29■■■□□ 2.76
DDX6-205ENST00000533239 SMARCA2P51531 1590 aa32.28■■■□□ 2.76
DDX6-205ENST00000533239 CUX2O14529 1486 aa32.25■■■□□ 2.75
DDX6-205ENST00000533239 HMGXB3Q12766 1538 aa32.21■■■□□ 2.75
DDX6-205ENST00000533239 BAZ1AQ9NRL2 1556 aaPredicted RBP32.12■■■□□ 2.73
DDX6-205ENST00000533239 BAZ1BQ9UIG0 1483 aaKnown RBP32.1■■■□□ 2.73
DDX6-205ENST00000533239 NESP48681 1621 aa32.08■■■□□ 2.73
DDX6-205ENST00000533239 PEG3Q9GZU2 1588 aa31.91■■■□□ 2.7
DDX6-205ENST00000533239 MROH2BQ7Z745 1585 aa31.9■■■□□ 2.7
DDX6-205ENST00000533239 LAMC3Q9Y6N6 1575 aa31.77■■■□□ 2.68
DDX6-205ENST00000533239 THOC2Q8NI27 1593 aaKnown RBP31.69■■■□□ 2.66
DDX6-205ENST00000533239 PDS5BQ9NTI5 1447 aa31.66■■■□□ 2.66
DDX6-205ENST00000533239 KIF21AQ7Z4S6 1674 aa31.58■■■□□ 2.65
DDX6-205ENST00000533239 CADPSQ9ULU8 1353 aa31.55■■■□□ 2.64
DDX6-205ENST00000533239 WIZO95785 1651 aa31.49■■■□□ 2.63
DDX6-205ENST00000533239 MRC2Q9UBG0 1479 aa31.38■■■□□ 2.61
DDX6-205ENST00000533239 WDR62O43379 1518 aa31.24■■■□□ 2.59
DDX6-205ENST00000533239 CEP164Q9UPV0 1460 aa31.24■■■□□ 2.59
DDX6-205ENST00000533239 RSF1Q96T23 1441 aaPredicted RBP31.19■■■□□ 2.58
DDX6-205ENST00000533239 FANCD2Q9BXW9 1451 aa31.19■■■□□ 2.58
DDX6-205ENST00000533239 CFTRP13569 1480 aa31.11■■■□□ 2.57
DDX6-205ENST00000533239 TRIM41Q8WV44 630 aa31.11■■■□□ 2.57
DDX6-205ENST00000533239 TOP2AP11388 1531 aaKnown RBP31.08■■■□□ 2.57
DDX6-205ENST00000533239 URB2Q14146 1524 aaKnown RBP30.92■■■□□ 2.54
DDX6-205ENST00000533239 OSCARQ8IYS5 282 aa30.87■■■□□ 2.53
DDX6-205ENST00000533239 CCDC88BA6NC98 1476 aa30.77■■■□□ 2.52
DDX6-205ENST00000533239 PRDM2Q13029 1718 aa30.68■■■□□ 2.5
DDX6-205ENST00000533239 IFT140Q96RY7 1462 aa30.61■■■□□ 2.49
DDX6-205ENST00000533239 ZNF608Q9ULD9 1512 aaPredicted RBP30.58■■■□□ 2.49
DDX6-205ENST00000533239 TOPBP1Q92547 1522 aa30.56■■■□□ 2.48
DDX6-205ENST00000533239 ABCC8Q09428 1581 aa30.49■■■□□ 2.47
DDX6-205ENST00000533239 DNMBPQ6XZF7 1577 aa30.41■■■□□ 2.46
DDX6-205ENST00000533239 RIMBP3CA6NJZ7 1639 aa30.37■■■□□ 2.45
DDX6-205ENST00000533239 RIMBP3BA6NNM3 1639 aa30.37■■■□□ 2.45
DDX6-205ENST00000533239 RIMBP3Q9UFD9 1639 aa30.37■■■□□ 2.45
DDX6-205ENST00000533239 EIF4G3O43432 1585 aaKnown RBP30.35■■■□□ 2.45
DDX6-205ENST00000533239 AQRO60306 1485 aaKnown RBP eCLIP30.32■■■□□ 2.447e-7■■■■■ 27.7
DDX6-205ENST00000533239 FBLN2P98095 1184 aa30.28■■■□□ 2.44
DDX6-205ENST00000533239 ARHGEF11O15085 1522 aa30.27■■■□□ 2.44
DDX6-205ENST00000533239 TARBP1Q13395 1621 aaKnown RBP30.24■■■□□ 2.43
DDX6-205ENST00000533239 POLA1P09884 1462 aaPredicted RBP30.24■■■□□ 2.43
DDX6-205ENST00000533239 CYB5RLQ6IPT4 315 aa30.19■■■□□ 2.42
DDX6-205ENST00000533239 RAD54L2Q9Y4B4 1467 aa30.18■■■□□ 2.42
DDX6-205ENST00000533239 SOGA1O94964 1423 aa30.16■■■□□ 2.42
DDX6-205ENST00000533239 CHD1O14646 1710 aa30.14■■■□□ 2.42
DDX6-205ENST00000533239 TDRD9Q8NDG6 1382 aaKnown RBP30.14■■■□□ 2.41
DDX6-205ENST00000533239 FGD5Q6ZNL6 1462 aa30.05■■■□□ 2.4
DDX6-205ENST00000533239 SNAPC4Q5SXM2 1469 aa29.99■■■□□ 2.39
DDX6-205ENST00000533239 CHMP7Q8WUX9 453 aaPredicted RBP29.98■■■□□ 2.39
DDX6-205ENST00000533239 CUX1P39880 1505 aa29.97■■■□□ 2.39
DDX6-205ENST00000533239 TRHP20396 242 aaPredicted RBP29.97■■■□□ 2.39
DDX6-205ENST00000533239 ARAP1Q96P48 1450 aa29.97■■■□□ 2.39
DDX6-205ENST00000533239 WDR97A6NE52 1622 aa29.89■■■□□ 2.38
DDX6-205ENST00000533239 SUPT5HO00267 1087 aaKnown RBP29.88■■■□□ 2.37
DDX6-205ENST00000533239 GRIN2BQ13224 1484 aa29.87■■■□□ 2.37
DDX6-205ENST00000533239 MAGI1Q96QZ7 1491 aaPredicted RBP29.87■■■□□ 2.37
DDX6-205ENST00000533239 SYNJ1O43426 1573 aa29.81■■■□□ 2.36
DDX6-205ENST00000533239 CLASP1Q7Z460 1538 aa29.79■■■□□ 2.36
DDX6-205ENST00000533239 SYNJ2O15056 1496 aa29.78■■■□□ 2.36
DDX6-205ENST00000533239 GAPVD1Q14C86 1478 aa29.76■■■□□ 2.35
DDX6-205ENST00000533239 PBRM1Q86U86 1689 aa29.67■■■□□ 2.34
DDX6-205ENST00000533239 ABCA10Q8WWZ4 1543 aa29.66■■■□□ 2.34
DDX6-205ENST00000533239 ABCA5Q8WWZ7 1642 aa29.59■■■□□ 2.33
DDX6-205ENST00000533239 WRNQ14191 1432 aaPredicted RBP eCLIP29.57■■■□□ 2.32
DDX6-205ENST00000533239 GRIN2AQ12879 1464 aa29.48■■■□□ 2.31
DDX6-205ENST00000533239 TOP2BQ02880 1626 aa29.42■■■□□ 2.3
DDX6-205ENST00000533239 ADAMTS12P58397 1594 aa29.4■■■□□ 2.3
DDX6-205ENST00000533239 BIVM-ERCC5R4GMW8 1640 aa29.39■■■□□ 2.3
DDX6-205ENST00000533239 FHAD1B1AJZ9 1412 aa29.37■■■□□ 2.29
DDX6-205ENST00000533239 ERCC6L2Q5T890 1561 aa29.36■■■□□ 2.29
DDX6-205ENST00000533239 NUP160Q12769 1436 aa29.36■■■□□ 2.29
DDX6-205ENST00000533239 CEP170Q5SW79 1584 aa29.35■■■□□ 2.29
DDX6-205ENST00000533239 ERICH3Q5RHP9 1530 aa29.28■■■□□ 2.28
DDX6-205ENST00000533239 AEBP2Q6ZN18 517 aaPredicted RBP29.21■■■□□ 2.27
DDX6-205ENST00000533239 SHROOM2Q13796 1616 aa29.19■■■□□ 2.26
DDX6-205ENST00000533239 JPH4Q96JJ6 628 aa29.17■■■□□ 2.26
DDX6-205ENST00000533239 PRG4Q92954 1404 aaPredicted RBP29.17■■■□□ 2.26
DDX6-205ENST00000533239 NPM1P06748 294 aaKnown RBP eCLIP29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms