RNA–Protein interactions for RNA: ENST00000533200.5

ALKBH3-211, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 5

Gene ALKBH3, Length 517 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-211ENST00000533200 NISCHQ9Y2I1 1504 aa22.88■■□□□ 1.25
ALKBH3-211ENST00000533200 ABCC9O60706 1549 aa20.92■□□□□ 0.94
ALKBH3-211ENST00000533200 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
ALKBH3-211ENST00000533200 RB1CC1Q8TDY2 1594 aa19.86■□□□□ 0.77
ALKBH3-211ENST00000533200 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
ALKBH3-211ENST00000533200 NACADO15069 1562 aa19.65■□□□□ 0.74
ALKBH3-211ENST00000533200 DCAF8L2P0C7V8 631 aa19.41■□□□□ 0.7
ALKBH3-211ENST00000533200 PABPN1Q86U42 306 aaKnown RBP eCLIP19.4■□□□□ 0.7
ALKBH3-211ENST00000533200 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
ALKBH3-211ENST00000533200 MYO15BQ96JP2 1530 aa19.3■□□□□ 0.68
ALKBH3-211ENST00000533200 BICRAQ9NZM4 1560 aa19.23■□□□□ 0.67
ALKBH3-211ENST00000533200 SHROOM4Q9ULL8 1493 aa19.04■□□□□ 0.64
ALKBH3-211ENST00000533200 DCAF1Q9Y4B6 1507 aa18.93■□□□□ 0.62
ALKBH3-211ENST00000533200 CC2D2AQ9P2K1 1620 aa18.91■□□□□ 0.62
ALKBH3-211ENST00000533200 CECR2Q9BXF3 1484 aa18.9■□□□□ 0.62
ALKBH3-211ENST00000533200 ZCCHC6Q5VYS8 1495 aaKnown RBP18.9■□□□□ 0.62
ALKBH3-211ENST00000533200 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
ALKBH3-211ENST00000533200 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
ALKBH3-211ENST00000533200 DNAJC5Q9H3Z4 198 aa18.53■□□□□ 0.56
ALKBH3-211ENST00000533200 CUX2O14529 1486 aa18.22■□□□□ 0.51
ALKBH3-211ENST00000533200 NCAPD3P42695 1498 aa18.13■□□□□ 0.49
ALKBH3-211ENST00000533200 ERCC6Q03468 1493 aa18.13■□□□□ 0.49
ALKBH3-211ENST00000533200 ATAD2BQ9ULI0 1458 aa18■□□□□ 0.47
ALKBH3-211ENST00000533200 SMARCA2P51531 1590 aa17.98■□□□□ 0.47
ALKBH3-211ENST00000533200 HMGXB3Q12766 1538 aa17.98■□□□□ 0.47
ALKBH3-211ENST00000533200 SMARCA4P51532 1647 aa17.91■□□□□ 0.46
ALKBH3-211ENST00000533200 NESP48681 1621 aa17.87■□□□□ 0.45
ALKBH3-211ENST00000533200 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
ALKBH3-211ENST00000533200 BAZ1AQ9NRL2 1556 aaPredicted RBP17.81■□□□□ 0.44
ALKBH3-211ENST00000533200 THOC2Q8NI27 1593 aaKnown RBP17.79■□□□□ 0.44
ALKBH3-211ENST00000533200 LAMC3Q9Y6N6 1575 aa17.78■□□□□ 0.44
ALKBH3-211ENST00000533200 PEG3Q9GZU2 1588 aa17.77■□□□□ 0.44
ALKBH3-211ENST00000533200 PDS5BQ9NTI5 1447 aa17.69■□□□□ 0.42
ALKBH3-211ENST00000533200 KIF21AQ7Z4S6 1674 aa17.67■□□□□ 0.42
ALKBH3-211ENST00000533200 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
ALKBH3-211ENST00000533200 CADPSQ9ULU8 1353 aa17.55■□□□□ 0.4
ALKBH3-211ENST00000533200 TRIM41Q8WV44 630 aa17.55■□□□□ 0.4
ALKBH3-211ENST00000533200 MRC2Q9UBG0 1479 aa17.53■□□□□ 0.4
ALKBH3-211ENST00000533200 WDR62O43379 1518 aa17.49■□□□□ 0.39
ALKBH3-211ENST00000533200 CEP164Q9UPV0 1460 aa17.4■□□□□ 0.38
ALKBH3-211ENST00000533200 WIZO95785 1651 aa17.37■□□□□ 0.37
ALKBH3-211ENST00000533200 OSCARQ8IYS5 282 aa17.34■□□□□ 0.37
ALKBH3-211ENST00000533200 FANCD2Q9BXW9 1451 aa17.34■□□□□ 0.37
ALKBH3-211ENST00000533200 CFTRP13569 1480 aa17.29■□□□□ 0.36
ALKBH3-211ENST00000533200 URB2Q14146 1524 aaKnown RBP17.2■□□□□ 0.34
ALKBH3-211ENST00000533200 TOP2AP11388 1531 aaKnown RBP17.16■□□□□ 0.34
ALKBH3-211ENST00000533200 RSF1Q96T23 1441 aaPredicted RBP17.13■□□□□ 0.33
ALKBH3-211ENST00000533200 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
ALKBH3-211ENST00000533200 RIMBP3CA6NJZ7 1639 aa17.1■□□□□ 0.33
ALKBH3-211ENST00000533200 RIMBP3BA6NNM3 1639 aa17.1■□□□□ 0.33
ALKBH3-211ENST00000533200 RIMBP3Q9UFD9 1639 aa17.1■□□□□ 0.33
ALKBH3-211ENST00000533200 IFT140Q96RY7 1462 aa17.07■□□□□ 0.32
ALKBH3-211ENST00000533200 ARHGEF11O15085 1522 aa17.02■□□□□ 0.32
ALKBH3-211ENST00000533200 ZNF608Q9ULD9 1512 aaPredicted RBP17.01■□□□□ 0.31
ALKBH3-211ENST00000533200 ABCC8Q09428 1581 aa16.99■□□□□ 0.31
ALKBH3-211ENST00000533200 TOPBP1Q92547 1522 aa16.97■□□□□ 0.31
ALKBH3-211ENST00000533200 CCDC88BA6NC98 1476 aa16.95■□□□□ 0.3
ALKBH3-211ENST00000533200 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
ALKBH3-211ENST00000533200 CYB5RLQ6IPT4 315 aa16.91■□□□□ 0.3
ALKBH3-211ENST00000533200 DNMBPQ6XZF7 1577 aa16.9■□□□□ 0.3
ALKBH3-211ENST00000533200 CHD1O14646 1710 aa16.87■□□□□ 0.29
ALKBH3-211ENST00000533200 TARBP1Q13395 1621 aaKnown RBP16.85■□□□□ 0.29
ALKBH3-211ENST00000533200 AQRO60306 1485 aaKnown RBP eCLIP16.84■□□□□ 0.292e-6■■■■■ 36
ALKBH3-211ENST00000533200 TRHP20396 242 aaPredicted RBP16.83■□□□□ 0.28
ALKBH3-211ENST00000533200 ARAP1Q96P48 1450 aa16.81■□□□□ 0.28
ALKBH3-211ENST00000533200 FBLN2P98095 1184 aa16.8■□□□□ 0.28
ALKBH3-211ENST00000533200 POLA1P09884 1462 aaPredicted RBP16.78■□□□□ 0.28
ALKBH3-211ENST00000533200 WDR97A6NE52 1622 aa16.73■□□□□ 0.27
ALKBH3-211ENST00000533200 SOGA1O94964 1423 aa16.7■□□□□ 0.26
ALKBH3-211ENST00000533200 RAD54L2Q9Y4B4 1467 aa16.69■□□□□ 0.26
ALKBH3-211ENST00000533200 TDRD9Q8NDG6 1382 aaKnown RBP16.68■□□□□ 0.26
ALKBH3-211ENST00000533200 CLASP1Q7Z460 1538 aa16.67■□□□□ 0.26
ALKBH3-211ENST00000533200 SYNJ1O43426 1573 aa16.67■□□□□ 0.26
ALKBH3-211ENST00000533200 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
ALKBH3-211ENST00000533200 CHMP7Q8WUX9 453 aaPredicted RBP16.66■□□□□ 0.26
ALKBH3-211ENST00000533200 MAGI1Q96QZ7 1491 aaPredicted RBP16.66■□□□□ 0.26
ALKBH3-211ENST00000533200 FGD5Q6ZNL6 1462 aa16.62■□□□□ 0.25
ALKBH3-211ENST00000533200 GRIN2BQ13224 1484 aa16.61■□□□□ 0.25
ALKBH3-211ENST00000533200 SYNJ2O15056 1496 aa16.6■□□□□ 0.25
ALKBH3-211ENST00000533200 AEBP2Q6ZN18 517 aaPredicted RBP16.59■□□□□ 0.25
ALKBH3-211ENST00000533200 CUX1P39880 1505 aa16.55■□□□□ 0.24
ALKBH3-211ENST00000533200 GAPVD1Q14C86 1478 aa16.52■□□□□ 0.23
ALKBH3-211ENST00000533200 PBRM1Q86U86 1689 aa16.52■□□□□ 0.23
ALKBH3-211ENST00000533200 ABCA10Q8WWZ4 1543 aa16.45■□□□□ 0.22
ALKBH3-211ENST00000533200 ABCA5Q8WWZ7 1642 aa16.44■□□□□ 0.22
ALKBH3-211ENST00000533200 GRIN2AQ12879 1464 aa16.39■□□□□ 0.21
ALKBH3-211ENST00000533200 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
ALKBH3-211ENST00000533200 NUP160Q12769 1436 aa16.34■□□□□ 0.21
ALKBH3-211ENST00000533200 WRNQ14191 1432 aaPredicted RBP eCLIP16.34■□□□□ 0.21
ALKBH3-211ENST00000533200 ERCC6L2Q5T890 1561 aa16.34■□□□□ 0.21
ALKBH3-211ENST00000533200 ADAMTS12P58397 1594 aa16.33■□□□□ 0.2
ALKBH3-211ENST00000533200 SHROOM2Q13796 1616 aa16.32■□□□□ 0.2
ALKBH3-211ENST00000533200 FHAD1B1AJZ9 1412 aa16.29■□□□□ 0.2
ALKBH3-211ENST00000533200 KIF13AQ9H1H9 1805 aa16.26■□□□□ 0.19
ALKBH3-211ENST00000533200 ERICH3Q5RHP9 1530 aa16.25■□□□□ 0.19
ALKBH3-211ENST00000533200 TOP2BQ02880 1626 aa16.25■□□□□ 0.19
ALKBH3-211ENST00000533200 BIVM-ERCC5R4GMW8 1640 aa16.24■□□□□ 0.19
ALKBH3-211ENST00000533200 PRG4Q92954 1404 aaPredicted RBP16.2■□□□□ 0.18
ALKBH3-211ENST00000533200 JPH4Q96JJ6 628 aa16.18■□□□□ 0.18
ALKBH3-211ENST00000533200 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms