RNA–Protein interactions for RNA: ENST00000533156.2

PAX6-227, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 848 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-227ENST00000533156 NISCHQ9Y2I1 1504 aa35.65■■■■□ 3.3
PAX6-227ENST00000533156 ABCC9O60706 1549 aa32.38■■■□□ 2.77
PAX6-227ENST00000533156 CCDC180Q9P1Z9 1646 aa32.13■■■□□ 2.73
PAX6-227ENST00000533156 DNAJC5BQ9UF47 199 aa30.73■■■□□ 2.51
PAX6-227ENST00000533156 RB1CC1Q8TDY2 1594 aa30.66■■■□□ 2.5
PAX6-227ENST00000533156 NACADO15069 1562 aa30.41■■■□□ 2.46
PAX6-227ENST00000533156 UNC13AQ9UPW8 1703 aa30.13■■■□□ 2.41
PAX6-227ENST00000533156 PABPN1Q86U42 306 aaKnown RBP eCLIP30.07■■■□□ 2.4
PAX6-227ENST00000533156 DCAF8L2P0C7V8 631 aa30.03■■■□□ 2.4
PAX6-227ENST00000533156 MYO15BQ96JP2 1530 aa29.93■■■□□ 2.38
PAX6-227ENST00000533156 BICRAQ9NZM4 1560 aa29.93■■■□□ 2.38
PAX6-227ENST00000533156 ZCCHC6Q5VYS8 1495 aaKnown RBP29.49■■■□□ 2.31
PAX6-227ENST00000533156 DCAF1Q9Y4B6 1507 aa29.44■■■□□ 2.3
PAX6-227ENST00000533156 SHROOM4Q9ULL8 1493 aa29.37■■■□□ 2.29
PAX6-227ENST00000533156 CC2D2AQ9P2K1 1620 aa29.27■■■□□ 2.28
PAX6-227ENST00000533156 SCRIBQ14160 1630 aa29.23■■■□□ 2.27
PAX6-227ENST00000533156 CECR2Q9BXF3 1484 aa29.19■■■□□ 2.26
PAX6-227ENST00000533156 EIF4G1Q04637 1599 aaKnown RBP29.13■■■□□ 2.25
PAX6-227ENST00000533156 DNAJC5Q9H3Z4 198 aa28.35■■■□□ 2.13
PAX6-227ENST00000533156 NCAPD3P42695 1498 aa28.1■■■□□ 2.09
PAX6-227ENST00000533156 CUX2O14529 1486 aa28.02■■■□□ 2.08
PAX6-227ENST00000533156 ATAD2BQ9ULI0 1458 aa27.98■■■□□ 2.07
PAX6-227ENST00000533156 ERCC6Q03468 1493 aa27.89■■■□□ 2.05
PAX6-227ENST00000533156 SMARCA4P51532 1647 aa27.89■■■□□ 2.05
PAX6-227ENST00000533156 HMGXB3Q12766 1538 aa27.87■■■□□ 2.05
PAX6-227ENST00000533156 SMARCA2P51531 1590 aa27.83■■■□□ 2.05
PAX6-227ENST00000533156 NESP48681 1621 aa27.78■■■□□ 2.04
PAX6-227ENST00000533156 PEG3Q9GZU2 1588 aa27.65■■■□□ 2.02
PAX6-227ENST00000533156 BAZ1AQ9NRL2 1556 aaPredicted RBP27.65■■■□□ 2.02
PAX6-227ENST00000533156 BAZ1BQ9UIG0 1483 aaKnown RBP27.63■■■□□ 2.01
PAX6-227ENST00000533156 THOC2Q8NI27 1593 aaKnown RBP27.59■■■□□ 2.01
PAX6-227ENST00000533156 MROH2BQ7Z745 1585 aa27.49■■□□□ 1.99
PAX6-227ENST00000533156 LAMC3Q9Y6N6 1575 aa27.49■■□□□ 1.99
PAX6-227ENST00000533156 KIF21AQ7Z4S6 1674 aa27.43■■□□□ 1.98
PAX6-227ENST00000533156 PDS5BQ9NTI5 1447 aa27.28■■□□□ 1.96
PAX6-227ENST00000533156 CADPSQ9ULU8 1353 aa27.2■■□□□ 1.94
PAX6-227ENST00000533156 WIZO95785 1651 aa27.14■■□□□ 1.94
PAX6-227ENST00000533156 MRC2Q9UBG0 1479 aa27.12■■□□□ 1.93
PAX6-227ENST00000533156 WDR62O43379 1518 aa27.11■■□□□ 1.93
PAX6-227ENST00000533156 CEP164Q9UPV0 1460 aa26.92■■□□□ 1.9
PAX6-227ENST00000533156 TRIM41Q8WV44 630 aa26.89■■□□□ 1.9
PAX6-227ENST00000533156 FANCD2Q9BXW9 1451 aa26.88■■□□□ 1.89
PAX6-227ENST00000533156 SUPT5HO00267 1087 aaKnown RBP26.86■■□□□ 1.89
PAX6-227ENST00000533156 CFTRP13569 1480 aa26.86■■□□□ 1.89
PAX6-227ENST00000533156 RSF1Q96T23 1441 aaPredicted RBP26.83■■□□□ 1.89
PAX6-227ENST00000533156 TOP2AP11388 1531 aaKnown RBP26.75■■□□□ 1.87
PAX6-227ENST00000533156 URB2Q14146 1524 aaKnown RBP26.75■■□□□ 1.87
PAX6-227ENST00000533156 OSCARQ8IYS5 282 aa26.62■■□□□ 1.85
PAX6-227ENST00000533156 PRDM2Q13029 1718 aa26.61■■□□□ 1.85
PAX6-227ENST00000533156 ZNF608Q9ULD9 1512 aaPredicted RBP26.46■■□□□ 1.83
PAX6-227ENST00000533156 CCDC88BA6NC98 1476 aa26.45■■□□□ 1.82
PAX6-227ENST00000533156 RIMBP3CA6NJZ7 1639 aa26.43■■□□□ 1.82
PAX6-227ENST00000533156 RIMBP3BA6NNM3 1639 aa26.43■■□□□ 1.82
PAX6-227ENST00000533156 RIMBP3Q9UFD9 1639 aa26.43■■□□□ 1.82
PAX6-227ENST00000533156 IFT140Q96RY7 1462 aa26.41■■□□□ 1.82
PAX6-227ENST00000533156 TOPBP1Q92547 1522 aa26.38■■□□□ 1.81
PAX6-227ENST00000533156 ARHGEF11O15085 1522 aa26.29■■□□□ 1.8
PAX6-227ENST00000533156 EIF4G3O43432 1585 aaKnown RBP26.29■■□□□ 1.8
PAX6-227ENST00000533156 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
PAX6-227ENST00000533156 TARBP1Q13395 1621 aaKnown RBP26.22■■□□□ 1.79
PAX6-227ENST00000533156 ABCC8Q09428 1581 aa26.22■■□□□ 1.79
PAX6-227ENST00000533156 CHD1O14646 1710 aa26.17■■□□□ 1.78
PAX6-227ENST00000533156 AQRO60306 1485 aaKnown RBP eCLIP26.14■■□□□ 1.78
PAX6-227ENST00000533156 POLA1P09884 1462 aaPredicted RBP26.09■■□□□ 1.77
PAX6-227ENST00000533156 ARAP1Q96P48 1450 aa26.04■■□□□ 1.76
PAX6-227ENST00000533156 CYB5RLQ6IPT4 315 aa26.03■■□□□ 1.76
PAX6-227ENST00000533156 RAD54L2Q9Y4B4 1467 aa26■■□□□ 1.75
PAX6-227ENST00000533156 TDRD9Q8NDG6 1382 aaKnown RBP25.92■■□□□ 1.74
PAX6-227ENST00000533156 SOGA1O94964 1423 aa25.9■■□□□ 1.74
PAX6-227ENST00000533156 FBLN2P98095 1184 aa25.89■■□□□ 1.74
PAX6-227ENST00000533156 CLASP1Q7Z460 1538 aa25.88■■□□□ 1.73
PAX6-227ENST00000533156 FGD5Q6ZNL6 1462 aa25.86■■□□□ 1.73
PAX6-227ENST00000533156 SNAPC4Q5SXM2 1469 aa25.85■■□□□ 1.73
PAX6-227ENST00000533156 WDR97A6NE52 1622 aa25.85■■□□□ 1.73
PAX6-227ENST00000533156 CUX1P39880 1505 aa25.83■■□□□ 1.73
PAX6-227ENST00000533156 MAGI1Q96QZ7 1491 aaPredicted RBP25.77■■□□□ 1.72
PAX6-227ENST00000533156 TRHP20396 242 aaPredicted RBP25.75■■□□□ 1.71
PAX6-227ENST00000533156 SYNJ1O43426 1573 aa25.73■■□□□ 1.71
PAX6-227ENST00000533156 GRIN2BQ13224 1484 aa25.72■■□□□ 1.71
PAX6-227ENST00000533156 SYNJ2O15056 1496 aa25.69■■□□□ 1.7
PAX6-227ENST00000533156 CHMP7Q8WUX9 453 aaPredicted RBP25.68■■□□□ 1.7
PAX6-227ENST00000533156 PBRM1Q86U86 1689 aa25.67■■□□□ 1.7
PAX6-227ENST00000533156 CHIC1Q5VXU3 224 aa25.61■■□□□ 1.69
PAX6-227ENST00000533156 GAPVD1Q14C86 1478 aa25.6■■□□□ 1.69
PAX6-227ENST00000533156 ABCA5Q8WWZ7 1642 aa25.59■■□□□ 1.69
PAX6-227ENST00000533156 ABCA10Q8WWZ4 1543 aa25.57■■□□□ 1.68
PAX6-227ENST00000533156 ERCC6L2Q5T890 1561 aa25.48■■□□□ 1.67
PAX6-227ENST00000533156 GRIN2AQ12879 1464 aa25.42■■□□□ 1.66
PAX6-227ENST00000533156 ADAMTS12P58397 1594 aa25.4■■□□□ 1.66
PAX6-227ENST00000533156 CEP170Q5SW79 1584 aa25.39■■□□□ 1.66
PAX6-227ENST00000533156 NUP160Q12769 1436 aa25.38■■□□□ 1.65
PAX6-227ENST00000533156 BIVM-ERCC5R4GMW8 1640 aa25.35■■□□□ 1.65
PAX6-227ENST00000533156 SHROOM2Q13796 1616 aa25.34■■□□□ 1.65
PAX6-227ENST00000533156 WRNQ14191 1432 aaPredicted RBP eCLIP25.33■■□□□ 1.65
PAX6-227ENST00000533156 TOP2BQ02880 1626 aa25.33■■□□□ 1.65
PAX6-227ENST00000533156 FHAD1B1AJZ9 1412 aa25.26■■□□□ 1.63
PAX6-227ENST00000533156 ERICH3Q5RHP9 1530 aa25.22■■□□□ 1.63
PAX6-227ENST00000533156 KIF13AQ9H1H9 1805 aa25.19■■□□□ 1.62
PAX6-227ENST00000533156 AEBP2Q6ZN18 517 aaPredicted RBP25.17■■□□□ 1.62
PAX6-227ENST00000533156 PRG4Q92954 1404 aaPredicted RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms