RNA–Protein interactions for RNA: ENST00000533094.1

GRIA4-215, Transcript of glutamate ionotropic receptor AMPA type subunit 4, humanhuman

TSL 1 (best)

Gene GRIA4, Length 1,117 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4-215ENST00000533094 NISCHQ9Y2I1 1504 aa30.47■■■□□ 2.47
GRIA4-215ENST00000533094 ABCC9O60706 1549 aa28.08■■■□□ 2.09
GRIA4-215ENST00000533094 CCDC180Q9P1Z9 1646 aa27.57■■■□□ 2
GRIA4-215ENST00000533094 DNAJC5BQ9UF47 199 aa26.79■■□□□ 1.88
GRIA4-215ENST00000533094 RB1CC1Q8TDY2 1594 aa26.48■■□□□ 1.83
GRIA4-215ENST00000533094 NACADO15069 1562 aa26.16■■□□□ 1.78
GRIA4-215ENST00000533094 PABPN1Q86U42 306 aaKnown RBP eCLIP26.08■■□□□ 1.77
GRIA4-215ENST00000533094 UNC13AQ9UPW8 1703 aa26.02■■□□□ 1.76
GRIA4-215ENST00000533094 DCAF8L2P0C7V8 631 aa26■■□□□ 1.75
GRIA4-215ENST00000533094 BICRAQ9NZM4 1560 aa25.75■■□□□ 1.71
GRIA4-215ENST00000533094 MYO15BQ96JP2 1530 aa25.58■■□□□ 1.68
GRIA4-215ENST00000533094 CC2D2AQ9P2K1 1620 aa25.35■■□□□ 1.65
GRIA4-215ENST00000533094 CECR2Q9BXF3 1484 aa25.32■■□□□ 1.64
GRIA4-215ENST00000533094 SHROOM4Q9ULL8 1493 aa25.24■■□□□ 1.63
GRIA4-215ENST00000533094 EIF4G1Q04637 1599 aaKnown RBP25.14■■□□□ 1.62
GRIA4-215ENST00000533094 SCRIBQ14160 1630 aa25.13■■□□□ 1.61
GRIA4-215ENST00000533094 ZCCHC6Q5VYS8 1495 aaKnown RBP25.13■■□□□ 1.61
GRIA4-215ENST00000533094 DCAF1Q9Y4B6 1507 aa25.08■■□□□ 1.61
GRIA4-215ENST00000533094 DNAJC5Q9H3Z4 198 aa24.92■■□□□ 1.58
GRIA4-215ENST00000533094 AEBP2Q6ZN18 517 aaPredicted RBP24.62■■□□□ 1.53
GRIA4-215ENST00000533094 CUX2O14529 1486 aa24.34■■□□□ 1.49
GRIA4-215ENST00000533094 ERCC6Q03468 1493 aa24.26■■□□□ 1.47
GRIA4-215ENST00000533094 NCAPD3P42695 1498 aa24.13■■□□□ 1.45
GRIA4-215ENST00000533094 ATAD2BQ9ULI0 1458 aa24.02■■□□□ 1.44
GRIA4-215ENST00000533094 NESP48681 1621 aa23.99■■□□□ 1.43
GRIA4-215ENST00000533094 HMGXB3Q12766 1538 aa23.92■■□□□ 1.42
GRIA4-215ENST00000533094 SMARCA2P51531 1590 aa23.91■■□□□ 1.42
GRIA4-215ENST00000533094 SMARCA4P51532 1647 aa23.9■■□□□ 1.42
GRIA4-215ENST00000533094 THOC2Q8NI27 1593 aaKnown RBP23.83■■□□□ 1.41
GRIA4-215ENST00000533094 BAZ1BQ9UIG0 1483 aaKnown RBP23.76■■□□□ 1.39
GRIA4-215ENST00000533094 CHIC1Q5VXU3 224 aa23.75■■□□□ 1.39
GRIA4-215ENST00000533094 KIF21AQ7Z4S6 1674 aa23.72■■□□□ 1.39
GRIA4-215ENST00000533094 LAMC3Q9Y6N6 1575 aa23.69■■□□□ 1.38
GRIA4-215ENST00000533094 TRIM41Q8WV44 630 aa23.69■■□□□ 1.38
GRIA4-215ENST00000533094 BAZ1AQ9NRL2 1556 aaPredicted RBP23.67■■□□□ 1.38
GRIA4-215ENST00000533094 PEG3Q9GZU2 1588 aa23.63■■□□□ 1.37
GRIA4-215ENST00000533094 PDS5BQ9NTI5 1447 aa23.56■■□□□ 1.36
GRIA4-215ENST00000533094 MROH2BQ7Z745 1585 aa23.49■■□□□ 1.35
GRIA4-215ENST00000533094 MRC2Q9UBG0 1479 aa23.4■■□□□ 1.34
GRIA4-215ENST00000533094 CADPSQ9ULU8 1353 aa23.39■■□□□ 1.33
GRIA4-215ENST00000533094 WDR62O43379 1518 aa23.36■■□□□ 1.33
GRIA4-215ENST00000533094 WIZO95785 1651 aa23.24■■□□□ 1.31
GRIA4-215ENST00000533094 CEP164Q9UPV0 1460 aa23.21■■□□□ 1.31
GRIA4-215ENST00000533094 OSCARQ8IYS5 282 aa23.17■■□□□ 1.3
GRIA4-215ENST00000533094 FANCD2Q9BXW9 1451 aa23.15■■□□□ 1.3
GRIA4-215ENST00000533094 CFTRP13569 1480 aa23.01■■□□□ 1.27
GRIA4-215ENST00000533094 URB2Q14146 1524 aaKnown RBP23■■□□□ 1.27
GRIA4-215ENST00000533094 RIMBP3CA6NJZ7 1639 aa22.98■■□□□ 1.27
GRIA4-215ENST00000533094 RIMBP3BA6NNM3 1639 aa22.98■■□□□ 1.27
GRIA4-215ENST00000533094 RIMBP3Q9UFD9 1639 aa22.98■■□□□ 1.27
GRIA4-215ENST00000533094 PRDM2Q13029 1718 aa22.87■■□□□ 1.25
GRIA4-215ENST00000533094 TOP2AP11388 1531 aaKnown RBP22.84■■□□□ 1.25
GRIA4-215ENST00000533094 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
GRIA4-215ENST00000533094 ZNF608Q9ULD9 1512 aaPredicted RBP22.82■■□□□ 1.24
GRIA4-215ENST00000533094 RSF1Q96T23 1441 aaPredicted RBP22.8■■□□□ 1.24
GRIA4-215ENST00000533094 IFT140Q96RY7 1462 aa22.75■■□□□ 1.23
GRIA4-215ENST00000533094 CYB5RLQ6IPT4 315 aa22.71■■□□□ 1.23
GRIA4-215ENST00000533094 EIF4G3O43432 1585 aaKnown RBP22.67■■□□□ 1.22
GRIA4-215ENST00000533094 CHD1O14646 1710 aa22.66■■□□□ 1.22
GRIA4-215ENST00000533094 TOPBP1Q92547 1522 aa22.66■■□□□ 1.22
GRIA4-215ENST00000533094 TRHP20396 242 aaPredicted RBP22.62■■□□□ 1.21
GRIA4-215ENST00000533094 CCDC88BA6NC98 1476 aa22.6■■□□□ 1.21
GRIA4-215ENST00000533094 ARAP1Q96P48 1450 aa22.56■■□□□ 1.2
GRIA4-215ENST00000533094 AQRO60306 1485 aaKnown RBP eCLIP22.54■■□□□ 1.2
GRIA4-215ENST00000533094 ABCC8Q09428 1581 aa22.54■■□□□ 1.2
GRIA4-215ENST00000533094 DNMBPQ6XZF7 1577 aa22.53■■□□□ 1.2
GRIA4-215ENST00000533094 TARBP1Q13395 1621 aaKnown RBP22.52■■□□□ 1.2
GRIA4-215ENST00000533094 FBLN2P98095 1184 aa22.51■■□□□ 1.19
GRIA4-215ENST00000533094 POLA1P09884 1462 aaPredicted RBP22.39■■□□□ 1.17
GRIA4-215ENST00000533094 RAD54L2Q9Y4B4 1467 aa22.35■■□□□ 1.17
GRIA4-215ENST00000533094 TDRD9Q8NDG6 1382 aaKnown RBP22.32■■□□□ 1.16
GRIA4-215ENST00000533094 CLASP1Q7Z460 1538 aa22.29■■□□□ 1.16
GRIA4-215ENST00000533094 SNAPC4Q5SXM2 1469 aa22.28■■□□□ 1.16
GRIA4-215ENST00000533094 SOGA1O94964 1423 aa22.28■■□□□ 1.16
GRIA4-215ENST00000533094 SYNJ1O43426 1573 aa22.24■■□□□ 1.15
GRIA4-215ENST00000533094 CHMP7Q8WUX9 453 aaPredicted RBP22.23■■□□□ 1.15
GRIA4-215ENST00000533094 FGD5Q6ZNL6 1462 aa22.19■■□□□ 1.14
GRIA4-215ENST00000533094 WDR97A6NE52 1622 aa22.19■■□□□ 1.14
GRIA4-215ENST00000533094 MAGI1Q96QZ7 1491 aaPredicted RBP22.16■■□□□ 1.14
GRIA4-215ENST00000533094 GRIN2BQ13224 1484 aa22.12■■□□□ 1.13
GRIA4-215ENST00000533094 SYNJ2O15056 1496 aa22.11■■□□□ 1.13
GRIA4-215ENST00000533094 PBRM1Q86U86 1689 aa22.11■■□□□ 1.13
GRIA4-215ENST00000533094 CUX1P39880 1505 aa22.1■■□□□ 1.13
GRIA4-215ENST00000533094 GAPVD1Q14C86 1478 aa22.09■■□□□ 1.13
GRIA4-215ENST00000533094 ERCC6L2Q5T890 1561 aa21.96■■□□□ 1.11
GRIA4-215ENST00000533094 ABCA5Q8WWZ7 1642 aa21.93■■□□□ 1.1
GRIA4-215ENST00000533094 ABCA10Q8WWZ4 1543 aa21.88■■□□□ 1.09
GRIA4-215ENST00000533094 KIF13AQ9H1H9 1805 aa21.86■■□□□ 1.09
GRIA4-215ENST00000533094 GRIN2AQ12879 1464 aa21.85■■□□□ 1.09
GRIA4-215ENST00000533094 CEP170Q5SW79 1584 aa21.85■■□□□ 1.09
GRIA4-215ENST00000533094 ADAMTS12P58397 1594 aa21.8■■□□□ 1.08
GRIA4-215ENST00000533094 SHROOM2Q13796 1616 aa21.78■■□□□ 1.08
GRIA4-215ENST00000533094 NUP160Q12769 1436 aa21.78■■□□□ 1.08
GRIA4-215ENST00000533094 WRNQ14191 1432 aaPredicted RBP eCLIP21.69■■□□□ 1.06
GRIA4-215ENST00000533094 FHAD1B1AJZ9 1412 aa21.68■■□□□ 1.06
GRIA4-215ENST00000533094 PRG4Q92954 1404 aaPredicted RBP21.64■■□□□ 1.06
GRIA4-215ENST00000533094 BIVM-ERCC5R4GMW8 1640 aa21.62■■□□□ 1.05
GRIA4-215ENST00000533094 TOP2BQ02880 1626 aa21.61■■□□□ 1.05
GRIA4-215ENST00000533094 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
GRIA4-215ENST00000533094 FAM69CQ0P6D2 419 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms