RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 NISCHQ9Y2I1 1504 aa36.64■■■■□ 3.46
CDC27-209ENST00000532893 ABCC9O60706 1549 aa33.53■■■□□ 2.96
CDC27-209ENST00000532893 CCDC180Q9P1Z9 1646 aa32.92■■■□□ 2.86
CDC27-209ENST00000532893 DNAJC5BQ9UF47 199 aa31.95■■■□□ 2.71
CDC27-209ENST00000532893 RB1CC1Q8TDY2 1594 aa31.64■■■□□ 2.65
CDC27-209ENST00000532893 DCAF8L2P0C7V8 631 aa31.33■■■□□ 2.61
CDC27-209ENST00000532893 NACADO15069 1562 aa31.31■■■□□ 2.6
CDC27-209ENST00000532893 PABPN1Q86U42 306 aaKnown RBP eCLIP31.26■■■□□ 2.59
CDC27-209ENST00000532893 UNC13AQ9UPW8 1703 aa30.84■■■□□ 2.53
CDC27-209ENST00000532893 BICRAQ9NZM4 1560 aa30.75■■■□□ 2.51
CDC27-209ENST00000532893 MYO15BQ96JP2 1530 aa30.72■■■□□ 2.51
CDC27-209ENST00000532893 ZCCHC6Q5VYS8 1495 aaKnown RBP30.24■■■□□ 2.43
CDC27-209ENST00000532893 CECR2Q9BXF3 1484 aa30.24■■■□□ 2.43
CDC27-209ENST00000532893 SHROOM4Q9ULL8 1493 aa30.21■■■□□ 2.43
CDC27-209ENST00000532893 CC2D2AQ9P2K1 1620 aa30.2■■■□□ 2.43
CDC27-209ENST00000532893 DCAF1Q9Y4B6 1507 aa30.17■■■□□ 2.42
CDC27-209ENST00000532893 SCRIBQ14160 1630 aa30.09■■■□□ 2.41
CDC27-209ENST00000532893 EIF4G1Q04637 1599 aaKnown RBP30.03■■■□□ 2.4
CDC27-209ENST00000532893 DNAJC5Q9H3Z4 198 aa29.61■■■□□ 2.33
CDC27-209ENST00000532893 AEBP2Q6ZN18 517 aaPredicted RBP29.46■■■□□ 2.31
CDC27-209ENST00000532893 CUX2O14529 1486 aa29.01■■■□□ 2.23
CDC27-209ENST00000532893 NCAPD3P42695 1498 aa28.97■■■□□ 2.23
CDC27-209ENST00000532893 ERCC6Q03468 1493 aa28.97■■■□□ 2.23
CDC27-209ENST00000532893 ATAD2BQ9ULI0 1458 aa28.83■■■□□ 2.21
CDC27-209ENST00000532893 NESP48681 1621 aa28.69■■■□□ 2.18
CDC27-209ENST00000532893 SMARCA2P51531 1590 aa28.67■■■□□ 2.18
CDC27-209ENST00000532893 HMGXB3Q12766 1538 aa28.64■■■□□ 2.18
CDC27-209ENST00000532893 SMARCA4P51532 1647 aa28.62■■■□□ 2.17
CDC27-209ENST00000532893 BAZ1BQ9UIG0 1483 aaKnown RBP28.52■■■□□ 2.16
CDC27-209ENST00000532893 BAZ1AQ9NRL2 1556 aaPredicted RBP28.43■■■□□ 2.14
CDC27-209ENST00000532893 THOC2Q8NI27 1593 aaKnown RBP28.36■■■□□ 2.13
CDC27-209ENST00000532893 PEG3Q9GZU2 1588 aa28.33■■■□□ 2.12
CDC27-209ENST00000532893 LAMC3Q9Y6N6 1575 aa28.32■■■□□ 2.12
CDC27-209ENST00000532893 CHIC1Q5VXU3 224 aa28.26■■■□□ 2.11
CDC27-209ENST00000532893 PDS5BQ9NTI5 1447 aa28.26■■■□□ 2.11
CDC27-209ENST00000532893 MROH2BQ7Z745 1585 aa28.25■■■□□ 2.11
CDC27-209ENST00000532893 TRIM41Q8WV44 630 aa28.19■■■□□ 2.1
CDC27-209ENST00000532893 KIF21AQ7Z4S6 1674 aa28.19■■■□□ 2.1
CDC27-209ENST00000532893 CADPSQ9ULU8 1353 aa28.11■■■□□ 2.09
CDC27-209ENST00000532893 MRC2Q9UBG0 1479 aa28■■■□□ 2.07
CDC27-209ENST00000532893 WDR62O43379 1518 aa27.9■■■□□ 2.06
CDC27-209ENST00000532893 WIZO95785 1651 aa27.85■■■□□ 2.05
CDC27-209ENST00000532893 CEP164Q9UPV0 1460 aa27.81■■■□□ 2.04
CDC27-209ENST00000532893 FANCD2Q9BXW9 1451 aa27.76■■■□□ 2.04
CDC27-209ENST00000532893 OSCARQ8IYS5 282 aa27.76■■■□□ 2.03
CDC27-209ENST00000532893 CFTRP13569 1480 aa27.66■■■□□ 2.02
CDC27-209ENST00000532893 URB2Q14146 1524 aaKnown RBP27.56■■■□□ 2
CDC27-209ENST00000532893 RSF1Q96T23 1441 aaPredicted RBP27.54■■■□□ 2
CDC27-209ENST00000532893 TOP2AP11388 1531 aaKnown RBP27.45■■□□□ 1.98
CDC27-209ENST00000532893 ZNF608Q9ULD9 1512 aaPredicted RBP27.31■■□□□ 1.96
CDC27-209ENST00000532893 RIMBP3CA6NJZ7 1639 aa27.3■■□□□ 1.96
CDC27-209ENST00000532893 RIMBP3BA6NNM3 1639 aa27.3■■□□□ 1.96
CDC27-209ENST00000532893 RIMBP3Q9UFD9 1639 aa27.3■■□□□ 1.96
CDC27-209ENST00000532893 IFT140Q96RY7 1462 aa27.27■■□□□ 1.96
CDC27-209ENST00000532893 CCDC88BA6NC98 1476 aa27.23■■□□□ 1.95
CDC27-209ENST00000532893 ARHGEF11O15085 1522 aa27.19■■□□□ 1.94
CDC27-209ENST00000532893 TOPBP1Q92547 1522 aa27.17■■□□□ 1.94
CDC27-209ENST00000532893 PRDM2Q13029 1718 aa27.17■■□□□ 1.94
CDC27-209ENST00000532893 CYB5RLQ6IPT4 315 aa27.17■■□□□ 1.94
CDC27-209ENST00000532893 ABCC8Q09428 1581 aa27.07■■□□□ 1.92
CDC27-209ENST00000532893 AQRO60306 1485 aaKnown RBP eCLIP27.05■■□□□ 1.927e-9■■■■■ 34.8
CDC27-209ENST00000532893 FBLN2P98095 1184 aa27.04■■□□□ 1.92
CDC27-209ENST00000532893 EIF4G3O43432 1585 aaKnown RBP27.04■■□□□ 1.92
CDC27-209ENST00000532893 TRHP20396 242 aaPredicted RBP27.01■■□□□ 1.91
CDC27-209ENST00000532893 DNMBPQ6XZF7 1577 aa26.99■■□□□ 1.91
CDC27-209ENST00000532893 TARBP1Q13395 1621 aaKnown RBP26.92■■□□□ 1.9
CDC27-209ENST00000532893 ARAP1Q96P48 1450 aa26.91■■□□□ 1.9
CDC27-209ENST00000532893 CHD1O14646 1710 aa26.9■■□□□ 1.9
CDC27-209ENST00000532893 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
CDC27-209ENST00000532893 TDRD9Q8NDG6 1382 aaKnown RBP26.84■■□□□ 1.89
CDC27-209ENST00000532893 RAD54L2Q9Y4B4 1467 aa26.84■■□□□ 1.89
CDC27-209ENST00000532893 SOGA1O94964 1423 aa26.81■■□□□ 1.88
CDC27-209ENST00000532893 CHMP7Q8WUX9 453 aaPredicted RBP26.74■■□□□ 1.87
CDC27-209ENST00000532893 SNAPC4Q5SXM2 1469 aa26.69■■□□□ 1.86
CDC27-209ENST00000532893 FGD5Q6ZNL6 1462 aa26.65■■□□□ 1.86
CDC27-209ENST00000532893 CLASP1Q7Z460 1538 aa26.61■■□□□ 1.85
CDC27-209ENST00000532893 MAGI1Q96QZ7 1491 aaPredicted RBP26.58■■□□□ 1.85
CDC27-209ENST00000532893 GRIN2BQ13224 1484 aa26.57■■□□□ 1.84
CDC27-209ENST00000532893 SYNJ1O43426 1573 aa26.57■■□□□ 1.84
CDC27-209ENST00000532893 CUX1P39880 1505 aa26.55■■□□□ 1.84
CDC27-209ENST00000532893 WDR97A6NE52 1622 aa26.54■■□□□ 1.84
CDC27-209ENST00000532893 SYNJ2O15056 1496 aa26.52■■□□□ 1.84
CDC27-209ENST00000532893 GAPVD1Q14C86 1478 aa26.43■■□□□ 1.82
CDC27-209ENST00000532893 PBRM1Q86U86 1689 aa26.32■■□□□ 1.8
CDC27-209ENST00000532893 ABCA10Q8WWZ4 1543 aa26.3■■□□□ 1.8
CDC27-209ENST00000532893 ABCA5Q8WWZ7 1642 aa26.24■■□□□ 1.79
CDC27-209ENST00000532893 ERCC6L2Q5T890 1561 aa26.23■■□□□ 1.79
CDC27-209ENST00000532893 GRIN2AQ12879 1464 aa26.21■■□□□ 1.79
CDC27-209ENST00000532893 WRNQ14191 1432 aaPredicted RBP eCLIP26.16■■□□□ 1.78
CDC27-209ENST00000532893 NUP160Q12769 1436 aa26.14■■□□□ 1.78
CDC27-209ENST00000532893 SUPT5HO00267 1087 aaKnown RBP26.14■■□□□ 1.78
CDC27-209ENST00000532893 CEP170Q5SW79 1584 aa26.13■■□□□ 1.77
CDC27-209ENST00000532893 ADAMTS12P58397 1594 aa26.08■■□□□ 1.77
CDC27-209ENST00000532893 FHAD1B1AJZ9 1412 aa26.08■■□□□ 1.77
CDC27-209ENST00000532893 SHROOM2Q13796 1616 aa26■■□□□ 1.75
CDC27-209ENST00000532893 JPH4Q96JJ6 628 aa26■■□□□ 1.75
CDC27-209ENST00000532893 PRG4Q92954 1404 aaPredicted RBP25.98■■□□□ 1.75
CDC27-209ENST00000532893 TOP2BQ02880 1626 aa25.96■■□□□ 1.75
CDC27-209ENST00000532893 ERICH3Q5RHP9 1530 aa25.94■■□□□ 1.74
CDC27-209ENST00000532893 BIVM-ERCC5R4GMW8 1640 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms