RNA–Protein interactions for RNA: ENST00000532873.5

DKK3-212, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

TSL 5

Gene DKK3, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-212ENST00000532873 NISCHQ9Y2I1 1504 aa31.7■■■□□ 2.66
DKK3-212ENST00000532873 ABCC9O60706 1549 aa28.89■■■□□ 2.22
DKK3-212ENST00000532873 CCDC180Q9P1Z9 1646 aa28.59■■■□□ 2.17
DKK3-212ENST00000532873 DNAJC5BQ9UF47 199 aa27.44■■□□□ 1.98
DKK3-212ENST00000532873 RB1CC1Q8TDY2 1594 aa27.35■■□□□ 1.97
DKK3-212ENST00000532873 NACADO15069 1562 aa27.09■■□□□ 1.93
DKK3-212ENST00000532873 PABPN1Q86U42 306 aaKnown RBP eCLIP26.84■■□□□ 1.89
DKK3-212ENST00000532873 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
DKK3-212ENST00000532873 DCAF8L2P0C7V8 631 aa26.81■■□□□ 1.88
DKK3-212ENST00000532873 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
DKK3-212ENST00000532873 MYO15BQ96JP2 1530 aa26.61■■□□□ 1.85
DKK3-212ENST00000532873 ZCCHC6Q5VYS8 1495 aaKnown RBP26.28■■□□□ 1.8
DKK3-212ENST00000532873 SHROOM4Q9ULL8 1493 aa26.17■■□□□ 1.78
DKK3-212ENST00000532873 DCAF1Q9Y4B6 1507 aa26.16■■□□□ 1.78
DKK3-212ENST00000532873 CC2D2AQ9P2K1 1620 aa26.1■■□□□ 1.77
DKK3-212ENST00000532873 CECR2Q9BXF3 1484 aa26.05■■□□□ 1.76
DKK3-212ENST00000532873 SCRIBQ14160 1630 aa26.03■■□□□ 1.76
DKK3-212ENST00000532873 EIF4G1Q04637 1599 aaKnown RBP25.96■■□□□ 1.75
DKK3-212ENST00000532873 DNAJC5Q9H3Z4 198 aa25.39■■□□□ 1.66
DKK3-212ENST00000532873 AEBP2Q6ZN18 517 aaPredicted RBP25.38■■□□□ 1.65
DKK3-212ENST00000532873 CUX2O14529 1486 aa25.02■■□□□ 1.6
DKK3-212ENST00000532873 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
DKK3-212ENST00000532873 ERCC6Q03468 1493 aa24.93■■□□□ 1.58
DKK3-212ENST00000532873 ATAD2BQ9ULI0 1458 aa24.9■■□□□ 1.58
DKK3-212ENST00000532873 SMARCA4P51532 1647 aa24.81■■□□□ 1.56
DKK3-212ENST00000532873 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
DKK3-212ENST00000532873 SMARCA2P51531 1590 aa24.79■■□□□ 1.56
DKK3-212ENST00000532873 NESP48681 1621 aa24.76■■□□□ 1.55
DKK3-212ENST00000532873 BAZ1BQ9UIG0 1483 aaKnown RBP24.62■■□□□ 1.53
DKK3-212ENST00000532873 BAZ1AQ9NRL2 1556 aaPredicted RBP24.61■■□□□ 1.53
DKK3-212ENST00000532873 THOC2Q8NI27 1593 aaKnown RBP24.58■■□□□ 1.52
DKK3-212ENST00000532873 PEG3Q9GZU2 1588 aa24.58■■□□□ 1.52
DKK3-212ENST00000532873 LAMC3Q9Y6N6 1575 aa24.5■■□□□ 1.51
DKK3-212ENST00000532873 KIF21AQ7Z4S6 1674 aa24.44■■□□□ 1.5
DKK3-212ENST00000532873 MROH2BQ7Z745 1585 aa24.44■■□□□ 1.5
DKK3-212ENST00000532873 CHIC1Q5VXU3 224 aa24.42■■□□□ 1.5
DKK3-212ENST00000532873 PDS5BQ9NTI5 1447 aa24.34■■□□□ 1.49
DKK3-212ENST00000532873 SUPT5HO00267 1087 aaKnown RBP24.28■■□□□ 1.48
DKK3-212ENST00000532873 CADPSQ9ULU8 1353 aa24.22■■□□□ 1.47
DKK3-212ENST00000532873 RSF1Q96T23 1441 aaPredicted RBP24.19■■□□□ 1.46
DKK3-212ENST00000532873 MRC2Q9UBG0 1479 aa24.18■■□□□ 1.46
DKK3-212ENST00000532873 WDR62O43379 1518 aa24.15■■□□□ 1.46
DKK3-212ENST00000532873 WIZO95785 1651 aa24.14■■□□□ 1.45
DKK3-212ENST00000532873 TRIM41Q8WV44 630 aa24.1■■□□□ 1.45
DKK3-212ENST00000532873 CEP164Q9UPV0 1460 aa24■■□□□ 1.43
DKK3-212ENST00000532873 FANCD2Q9BXW9 1451 aa23.96■■□□□ 1.43
DKK3-212ENST00000532873 CFTRP13569 1480 aa23.9■■□□□ 1.42
DKK3-212ENST00000532873 URB2Q14146 1524 aaKnown RBP23.82■■□□□ 1.4
DKK3-212ENST00000532873 OSCARQ8IYS5 282 aa23.8■■□□□ 1.4
DKK3-212ENST00000532873 TOP2AP11388 1531 aaKnown RBP23.79■■□□□ 1.4
DKK3-212ENST00000532873 PRDM2Q13029 1718 aa23.66■■□□□ 1.38
DKK3-212ENST00000532873 RIMBP3CA6NJZ7 1639 aa23.59■■□□□ 1.37
DKK3-212ENST00000532873 RIMBP3BA6NNM3 1639 aa23.59■■□□□ 1.37
DKK3-212ENST00000532873 RIMBP3Q9UFD9 1639 aa23.59■■□□□ 1.37
DKK3-212ENST00000532873 ZNF608Q9ULD9 1512 aaPredicted RBP23.58■■□□□ 1.36
DKK3-212ENST00000532873 IFT140Q96RY7 1462 aa23.54■■□□□ 1.36
DKK3-212ENST00000532873 CCDC88BA6NC98 1476 aa23.52■■□□□ 1.36
DKK3-212ENST00000532873 TOPBP1Q92547 1522 aa23.49■■□□□ 1.35
DKK3-212ENST00000532873 ARHGEF11O15085 1522 aa23.46■■□□□ 1.35
DKK3-212ENST00000532873 EIF4G3O43432 1585 aaKnown RBP23.42■■□□□ 1.34
DKK3-212ENST00000532873 ABCC8Q09428 1581 aa23.36■■□□□ 1.33
DKK3-212ENST00000532873 DNMBPQ6XZF7 1577 aa23.36■■□□□ 1.33
DKK3-212ENST00000532873 CHD1O14646 1710 aa23.33■■□□□ 1.32
DKK3-212ENST00000532873 TARBP1Q13395 1621 aaKnown RBP23.33■■□□□ 1.32
DKK3-212ENST00000532873 AQRO60306 1485 aaKnown RBP eCLIP23.3■■□□□ 1.32
DKK3-212ENST00000532873 CYB5RLQ6IPT4 315 aa23.27■■□□□ 1.32
DKK3-212ENST00000532873 POLA1P09884 1462 aaPredicted RBP23.23■■□□□ 1.31
DKK3-212ENST00000532873 ARAP1Q96P48 1450 aa23.23■■□□□ 1.31
DKK3-212ENST00000532873 FBLN2P98095 1184 aa23.15■■□□□ 1.3
DKK3-212ENST00000532873 RAD54L2Q9Y4B4 1467 aa23.15■■□□□ 1.3
DKK3-212ENST00000532873 TDRD9Q8NDG6 1382 aaKnown RBP23.1■■□□□ 1.29
DKK3-212ENST00000532873 TRHP20396 242 aaPredicted RBP23.09■■□□□ 1.29
DKK3-212ENST00000532873 SOGA1O94964 1423 aa23.08■■□□□ 1.29
DKK3-212ENST00000532873 CLASP1Q7Z460 1538 aa23.05■■□□□ 1.28
DKK3-212ENST00000532873 SNAPC4Q5SXM2 1469 aa23.05■■□□□ 1.28
DKK3-212ENST00000532873 FGD5Q6ZNL6 1462 aa23.03■■□□□ 1.28
DKK3-212ENST00000532873 WDR97A6NE52 1622 aa23.02■■□□□ 1.28
DKK3-212ENST00000532873 CUX1P39880 1505 aa22.98■■□□□ 1.27
DKK3-212ENST00000532873 MAGI1Q96QZ7 1491 aaPredicted RBP22.96■■□□□ 1.27
DKK3-212ENST00000532873 SYNJ1O43426 1573 aa22.95■■□□□ 1.26
DKK3-212ENST00000532873 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
DKK3-212ENST00000532873 GRIN2BQ13224 1484 aa22.92■■□□□ 1.26
DKK3-212ENST00000532873 SYNJ2O15056 1496 aa22.9■■□□□ 1.26
DKK3-212ENST00000532873 PBRM1Q86U86 1689 aa22.85■■□□□ 1.25
DKK3-212ENST00000532873 GAPVD1Q14C86 1478 aa22.8■■□□□ 1.24
DKK3-212ENST00000532873 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
DKK3-212ENST00000532873 ABCA5Q8WWZ7 1642 aa22.77■■□□□ 1.24
DKK3-212ENST00000532873 ABCA10Q8WWZ4 1543 aa22.75■■□□□ 1.23
DKK3-212ENST00000532873 ERCC6L2Q5T890 1561 aa22.68■■□□□ 1.22
DKK3-212ENST00000532873 TOP2BQ02880 1626 aa22.66■■□□□ 1.22
DKK3-212ENST00000532873 BIVM-ERCC5R4GMW8 1640 aa22.66■■□□□ 1.22
DKK3-212ENST00000532873 GRIN2AQ12879 1464 aa22.64■■□□□ 1.21
DKK3-212ENST00000532873 ADAMTS12P58397 1594 aa22.61■■□□□ 1.21
DKK3-212ENST00000532873 CEP170Q5SW79 1584 aa22.61■■□□□ 1.21
DKK3-212ENST00000532873 NUP160Q12769 1436 aa22.59■■□□□ 1.21
DKK3-212ENST00000532873 SHROOM2Q13796 1616 aa22.56■■□□□ 1.2
DKK3-212ENST00000532873 FHAD1B1AJZ9 1412 aa22.49■■□□□ 1.19
DKK3-212ENST00000532873 FAM9AQ8IZU1 332 aaPredicted RBP22.47■■□□□ 1.19
DKK3-212ENST00000532873 ERICH3Q5RHP9 1530 aa22.45■■□□□ 1.18
DKK3-212ENST00000532873 KIF13AQ9H1H9 1805 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms