RNA–Protein interactions for RNA: ENST00000532647.1

KIRREL3-206, Transcript of kirre like nephrin family adhesion molecule 3, humanhuman

TSL 4

Gene KIRREL3, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIRREL3-206ENST00000532647 NISCHQ9Y2I1 1504 aa32.75■■■□□ 2.83
KIRREL3-206ENST00000532647 CCDC180Q9P1Z9 1646 aa29.16■■■□□ 2.26
KIRREL3-206ENST00000532647 ABCC9O60706 1549 aa28.48■■■□□ 2.15
KIRREL3-206ENST00000532647 RB1CC1Q8TDY2 1594 aa27.43■■□□□ 1.98
KIRREL3-206ENST00000532647 NACADO15069 1562 aa27.39■■□□□ 1.97
KIRREL3-206ENST00000532647 DCAF8L2P0C7V8 631 aa27.37■■□□□ 1.97
KIRREL3-206ENST00000532647 ZCCHC6Q5VYS8 1495 aaKnown RBP27.29■■□□□ 1.96
KIRREL3-206ENST00000532647 MYO15BQ96JP2 1530 aa27.19■■□□□ 1.94
KIRREL3-206ENST00000532647 DCAF1Q9Y4B6 1507 aa27.09■■□□□ 1.93
KIRREL3-206ENST00000532647 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
KIRREL3-206ENST00000532647 SCRIBQ14160 1630 aa26.61■■□□□ 1.85
KIRREL3-206ENST00000532647 PABPN1Q86U42 306 aaKnown RBP eCLIP26.58■■□□□ 1.85
KIRREL3-206ENST00000532647 BICRAQ9NZM4 1560 aa26.56■■□□□ 1.84
KIRREL3-206ENST00000532647 SHROOM4Q9ULL8 1493 aa26.3■■□□□ 1.8
KIRREL3-206ENST00000532647 DNAJC5BQ9UF47 199 aa26.04■■□□□ 1.76
KIRREL3-206ENST00000532647 EIF4G1Q04637 1599 aaKnown RBP25.88■■□□□ 1.73
KIRREL3-206ENST00000532647 CC2D2AQ9P2K1 1620 aa25.77■■□□□ 1.72
KIRREL3-206ENST00000532647 CECR2Q9BXF3 1484 aa25.58■■□□□ 1.69
KIRREL3-206ENST00000532647 SMARCA4P51532 1647 aa25.44■■□□□ 1.66
KIRREL3-206ENST00000532647 BAZ1AQ9NRL2 1556 aaPredicted RBP25.4■■□□□ 1.66
KIRREL3-206ENST00000532647 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
KIRREL3-206ENST00000532647 ATAD2BQ9ULI0 1458 aa25.25■■□□□ 1.63
KIRREL3-206ENST00000532647 MROH2BQ7Z745 1585 aa25.23■■□□□ 1.63
KIRREL3-206ENST00000532647 NCAPD3P42695 1498 aa25.22■■□□□ 1.63
KIRREL3-206ENST00000532647 PEG3Q9GZU2 1588 aa25.16■■□□□ 1.62
KIRREL3-206ENST00000532647 HMGXB3Q12766 1538 aa25.15■■□□□ 1.62
KIRREL3-206ENST00000532647 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
KIRREL3-206ENST00000532647 WIZO95785 1651 aa25.01■■□□□ 1.59
KIRREL3-206ENST00000532647 RSF1Q96T23 1441 aaPredicted RBP24.94■■□□□ 1.58
KIRREL3-206ENST00000532647 TOP2AP11388 1531 aaKnown RBP24.73■■□□□ 1.55
KIRREL3-206ENST00000532647 NESP48681 1621 aa24.64■■□□□ 1.53
KIRREL3-206ENST00000532647 LAMC3Q9Y6N6 1575 aa24.61■■□□□ 1.53
KIRREL3-206ENST00000532647 ERCC6Q03468 1493 aa24.58■■□□□ 1.53
KIRREL3-206ENST00000532647 CADPSQ9ULU8 1353 aa24.5■■□□□ 1.51
KIRREL3-206ENST00000532647 KIF21AQ7Z4S6 1674 aa24.42■■□□□ 1.5
KIRREL3-206ENST00000532647 PDS5BQ9NTI5 1447 aa24.42■■□□□ 1.5
KIRREL3-206ENST00000532647 CCDC88BA6NC98 1476 aa24.4■■□□□ 1.5
KIRREL3-206ENST00000532647 CFTRP13569 1480 aa24.36■■□□□ 1.49
KIRREL3-206ENST00000532647 SUPT5HO00267 1087 aaKnown RBP24.35■■□□□ 1.49
KIRREL3-206ENST00000532647 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
KIRREL3-206ENST00000532647 THOC2Q8NI27 1593 aaKnown RBP24.29■■□□□ 1.48
KIRREL3-206ENST00000532647 CUX2O14529 1486 aa24.29■■□□□ 1.48
KIRREL3-206ENST00000532647 FANCD2Q9BXW9 1451 aa24.25■■□□□ 1.47
KIRREL3-206ENST00000532647 CEP164Q9UPV0 1460 aa24.23■■□□□ 1.47
KIRREL3-206ENST00000532647 MRC2Q9UBG0 1479 aa24.18■■□□□ 1.46
KIRREL3-206ENST00000532647 WDR62O43379 1518 aa24.1■■□□□ 1.45
KIRREL3-206ENST00000532647 URB2Q14146 1524 aaKnown RBP23.99■■□□□ 1.43
KIRREL3-206ENST00000532647 ABCC8Q09428 1581 aa23.86■■□□□ 1.41
KIRREL3-206ENST00000532647 TOPBP1Q92547 1522 aa23.86■■□□□ 1.41
KIRREL3-206ENST00000532647 DNMBPQ6XZF7 1577 aa23.86■■□□□ 1.41
KIRREL3-206ENST00000532647 IFT140Q96RY7 1462 aa23.71■■□□□ 1.39
KIRREL3-206ENST00000532647 CUX1P39880 1505 aa23.68■■□□□ 1.38
KIRREL3-206ENST00000532647 POLA1P09884 1462 aaPredicted RBP23.65■■□□□ 1.38
KIRREL3-206ENST00000532647 TARBP1Q13395 1621 aaKnown RBP23.61■■□□□ 1.37
KIRREL3-206ENST00000532647 FGD5Q6ZNL6 1462 aa23.61■■□□□ 1.37
KIRREL3-206ENST00000532647 ZNF608Q9ULD9 1512 aaPredicted RBP23.59■■□□□ 1.37
KIRREL3-206ENST00000532647 SOGA1O94964 1423 aa23.55■■□□□ 1.36
KIRREL3-206ENST00000532647 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
KIRREL3-206ENST00000532647 EIF4G3O43432 1585 aaKnown RBP23.54■■□□□ 1.36
KIRREL3-206ENST00000532647 WRNQ14191 1432 aaPredicted RBP eCLIP23.54■■□□□ 1.36
KIRREL3-206ENST00000532647 BIVM-ERCC5R4GMW8 1640 aa23.52■■□□□ 1.36
KIRREL3-206ENST00000532647 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
KIRREL3-206ENST00000532647 SYNJ1O43426 1573 aa23.49■■□□□ 1.35
KIRREL3-206ENST00000532647 DNAJC5Q9H3Z4 198 aa23.46■■□□□ 1.35
KIRREL3-206ENST00000532647 WDR97A6NE52 1622 aa23.45■■□□□ 1.34
KIRREL3-206ENST00000532647 AQRO60306 1485 aaKnown RBP eCLIP23.45■■□□□ 1.34
KIRREL3-206ENST00000532647 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
KIRREL3-206ENST00000532647 ABCA10Q8WWZ4 1543 aa23.37■■□□□ 1.33
KIRREL3-206ENST00000532647 PBRM1Q86U86 1689 aa23.32■■□□□ 1.32
KIRREL3-206ENST00000532647 ABCA5Q8WWZ7 1642 aa23.3■■□□□ 1.32
KIRREL3-206ENST00000532647 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
KIRREL3-206ENST00000532647 GRIN2BQ13224 1484 aa23.29■■□□□ 1.32
KIRREL3-206ENST00000532647 CHD1O14646 1710 aa23.28■■□□□ 1.32
KIRREL3-206ENST00000532647 SNAPC4Q5SXM2 1469 aa23.26■■□□□ 1.31
KIRREL3-206ENST00000532647 OSCARQ8IYS5 282 aa23.25■■□□□ 1.31
KIRREL3-206ENST00000532647 MAGI1Q96QZ7 1491 aaPredicted RBP23.23■■□□□ 1.31
KIRREL3-206ENST00000532647 FBLN2P98095 1184 aa23.19■■□□□ 1.3
KIRREL3-206ENST00000532647 SYNJ2O15056 1496 aa23.13■■□□□ 1.29
KIRREL3-206ENST00000532647 CHMP7Q8WUX9 453 aaPredicted RBP23.12■■□□□ 1.29
KIRREL3-206ENST00000532647 ERICH3Q5RHP9 1530 aa23.1■■□□□ 1.29
KIRREL3-206ENST00000532647 ADAMTS12P58397 1594 aa23.09■■□□□ 1.29
KIRREL3-206ENST00000532647 KIF27Q86VH2 1401 aa23.05■■□□□ 1.28
KIRREL3-206ENST00000532647 FHAD1B1AJZ9 1412 aa23.01■■□□□ 1.27
KIRREL3-206ENST00000532647 TRIM41Q8WV44 630 aa22.99■■□□□ 1.27
KIRREL3-206ENST00000532647 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
KIRREL3-206ENST00000532647 CLASP1Q7Z460 1538 aa22.96■■□□□ 1.27
KIRREL3-206ENST00000532647 CUL7Q14999 1698 aa22.93■■□□□ 1.26
KIRREL3-206ENST00000532647 RIMBP3CA6NJZ7 1639 aa22.93■■□□□ 1.26
KIRREL3-206ENST00000532647 RIMBP3BA6NNM3 1639 aa22.93■■□□□ 1.26
KIRREL3-206ENST00000532647 RIMBP3Q9UFD9 1639 aa22.93■■□□□ 1.26
KIRREL3-206ENST00000532647 ARHGEF11O15085 1522 aa22.91■■□□□ 1.26
KIRREL3-206ENST00000532647 IGF1RP08069 1367 aa22.9■■□□□ 1.26
KIRREL3-206ENST00000532647 CEP170Q5SW79 1584 aa22.89■■□□□ 1.25
KIRREL3-206ENST00000532647 NUP160Q12769 1436 aa22.86■■□□□ 1.25
KIRREL3-206ENST00000532647 RUSC2Q8N2Y8 1516 aa22.82■■□□□ 1.24
KIRREL3-206ENST00000532647 CARMIL1Q5VZK9 1371 aa22.8■■□□□ 1.24
KIRREL3-206ENST00000532647 SHROOM2Q13796 1616 aa22.72■■□□□ 1.23
KIRREL3-206ENST00000532647 ARAP1Q96P48 1450 aa22.71■■□□□ 1.23
KIRREL3-206ENST00000532647 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
KIRREL3-206ENST00000532647 RAPGEF2Q9Y4G8 1499 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms