RNA–Protein interactions for RNA: ENST00000532590.1

FOXRED1-214, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-214ENST00000532590 NISCHQ9Y2I1 1504 aa15.35■□□□□ 0.05
FOXRED1-214ENST00000532590 ABCC9O60706 1549 aa14.48□□□□□ -0.09
FOXRED1-214ENST00000532590 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
FOXRED1-214ENST00000532590 CCDC180Q9P1Z9 1646 aa13.91□□□□□ -0.18
FOXRED1-214ENST00000532590 RB1CC1Q8TDY2 1594 aa13.51□□□□□ -0.25
FOXRED1-214ENST00000532590 PABPN1Q86U42 306 aaKnown RBP eCLIP13.46□□□□□ -0.25
FOXRED1-214ENST00000532590 DCAF8L2P0C7V8 631 aa13.32□□□□□ -0.28
FOXRED1-214ENST00000532590 NACADO15069 1562 aa13.28□□□□□ -0.28
FOXRED1-214ENST00000532590 UNC13AQ9UPW8 1703 aa13.16□□□□□ -0.3
FOXRED1-214ENST00000532590 DNAJC5Q9H3Z4 198 aa13.14□□□□□ -0.31
FOXRED1-214ENST00000532590 BICRAQ9NZM4 1560 aa13.13□□□□□ -0.31
FOXRED1-214ENST00000532590 CECR2Q9BXF3 1484 aa13.07□□□□□ -0.32
FOXRED1-214ENST00000532590 CC2D2AQ9P2K1 1620 aa13.01□□□□□ -0.33
FOXRED1-214ENST00000532590 MYO15BQ96JP2 1530 aa12.9□□□□□ -0.34
FOXRED1-214ENST00000532590 EIF4G1Q04637 1599 aaKnown RBP12.86□□□□□ -0.35
FOXRED1-214ENST00000532590 SHROOM4Q9ULL8 1493 aa12.85□□□□□ -0.35
FOXRED1-214ENST00000532590 SCRIBQ14160 1630 aa12.76□□□□□ -0.37
FOXRED1-214ENST00000532590 ZCCHC6Q5VYS8 1495 aaKnown RBP12.61□□□□□ -0.39
FOXRED1-214ENST00000532590 CUX2O14529 1486 aa12.59□□□□□ -0.39
FOXRED1-214ENST00000532590 DCAF1Q9Y4B6 1507 aa12.58□□□□□ -0.4
FOXRED1-214ENST00000532590 ERCC6Q03468 1493 aa12.54□□□□□ -0.4
FOXRED1-214ENST00000532590 TRIM41Q8WV44 630 aa12.49□□□□□ -0.41
FOXRED1-214ENST00000532590 NESP48681 1621 aa12.3□□□□□ -0.44
FOXRED1-214ENST00000532590 NCAPD3P42695 1498 aa12.27□□□□□ -0.44
FOXRED1-214ENST00000532590 ATAD2BQ9ULI0 1458 aa12.21□□□□□ -0.46
FOXRED1-214ENST00000532590 THOC2Q8NI27 1593 aaKnown RBP12.2□□□□□ -0.46
FOXRED1-214ENST00000532590 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
FOXRED1-214ENST00000532590 HMGXB3Q12766 1538 aa12.13□□□□□ -0.47
FOXRED1-214ENST00000532590 BAZ1BQ9UIG0 1483 aaKnown RBP12.09□□□□□ -0.47
FOXRED1-214ENST00000532590 KIF21AQ7Z4S6 1674 aa12.08□□□□□ -0.48
FOXRED1-214ENST00000532590 SMARCA4P51532 1647 aa12.07□□□□□ -0.48
FOXRED1-214ENST00000532590 LAMC3Q9Y6N6 1575 aa12.06□□□□□ -0.48
FOXRED1-214ENST00000532590 PDS5BQ9NTI5 1447 aa12.05□□□□□ -0.48
FOXRED1-214ENST00000532590 OSCARQ8IYS5 282 aa12.01□□□□□ -0.49
FOXRED1-214ENST00000532590 BAZ1AQ9NRL2 1556 aaPredicted RBP12□□□□□ -0.49
FOXRED1-214ENST00000532590 MRC2Q9UBG0 1479 aa11.98□□□□□ -0.49
FOXRED1-214ENST00000532590 WDR62O43379 1518 aa11.93□□□□□ -0.5
FOXRED1-214ENST00000532590 CADPSQ9ULU8 1353 aa11.92□□□□□ -0.5
FOXRED1-214ENST00000532590 PEG3Q9GZU2 1588 aa11.9□□□□□ -0.5
FOXRED1-214ENST00000532590 RIMBP3CA6NJZ7 1639 aa11.86□□□□□ -0.51
FOXRED1-214ENST00000532590 RIMBP3BA6NNM3 1639 aa11.86□□□□□ -0.51
FOXRED1-214ENST00000532590 RIMBP3Q9UFD9 1639 aa11.86□□□□□ -0.51
FOXRED1-214ENST00000532590 MROH2BQ7Z745 1585 aa11.86□□□□□ -0.51
FOXRED1-214ENST00000532590 CEP164Q9UPV0 1460 aa11.85□□□□□ -0.51
FOXRED1-214ENST00000532590 TRHP20396 242 aaPredicted RBP11.85□□□□□ -0.51
FOXRED1-214ENST00000532590 AEBP2Q6ZN18 517 aaPredicted RBP11.83□□□□□ -0.52
FOXRED1-214ENST00000532590 FANCD2Q9BXW9 1451 aa11.81□□□□□ -0.52
FOXRED1-214ENST00000532590 CYB5RLQ6IPT4 315 aa11.8□□□□□ -0.52
FOXRED1-214ENST00000532590 ARHGEF11O15085 1522 aa11.78□□□□□ -0.52
FOXRED1-214ENST00000532590 URB2Q14146 1524 aaKnown RBP11.74□□□□□ -0.53
FOXRED1-214ENST00000532590 ZNF608Q9ULD9 1512 aaPredicted RBP11.69□□□□□ -0.54
FOXRED1-214ENST00000532590 WIZO95785 1651 aa11.68□□□□□ -0.54
FOXRED1-214ENST00000532590 CFTRP13569 1480 aa11.67□□□□□ -0.54
FOXRED1-214ENST00000532590 ARAP1Q96P48 1450 aa11.64□□□□□ -0.55
FOXRED1-214ENST00000532590 FBLN2P98095 1184 aa11.62□□□□□ -0.55
FOXRED1-214ENST00000532590 IFT140Q96RY7 1462 aa11.62□□□□□ -0.55
FOXRED1-214ENST00000532590 EIF4G3O43432 1585 aaKnown RBP11.55□□□□□ -0.56
FOXRED1-214ENST00000532590 CHD1O14646 1710 aa11.55□□□□□ -0.56
FOXRED1-214ENST00000532590 RSF1Q96T23 1441 aaPredicted RBP11.53□□□□□ -0.56
FOXRED1-214ENST00000532590 AQRO60306 1485 aaKnown RBP eCLIP11.53□□□□□ -0.56
FOXRED1-214ENST00000532590 TOPBP1Q92547 1522 aa11.51□□□□□ -0.57
FOXRED1-214ENST00000532590 TOP2AP11388 1531 aaKnown RBP11.49□□□□□ -0.57
FOXRED1-214ENST00000532590 PRDM2Q13029 1718 aa11.45□□□□□ -0.58
FOXRED1-214ENST00000532590 ABCC8Q09428 1581 aa11.42□□□□□ -0.58
FOXRED1-214ENST00000532590 TARBP1Q13395 1621 aaKnown RBP11.42□□□□□ -0.58
FOXRED1-214ENST00000532590 DNMBPQ6XZF7 1577 aa11.41□□□□□ -0.58
FOXRED1-214ENST00000532590 CHMP7Q8WUX9 453 aaPredicted RBP11.41□□□□□ -0.58
FOXRED1-214ENST00000532590 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
FOXRED1-214ENST00000532590 CCDC88BA6NC98 1476 aa11.39□□□□□ -0.59
FOXRED1-214ENST00000532590 CLASP1Q7Z460 1538 aa11.39□□□□□ -0.59
FOXRED1-214ENST00000532590 SNAPC4Q5SXM2 1469 aa11.38□□□□□ -0.59
FOXRED1-214ENST00000532590 POLA1P09884 1462 aaPredicted RBP11.38□□□□□ -0.59
FOXRED1-214ENST00000532590 RAD54L2Q9Y4B4 1467 aa11.38□□□□□ -0.59
FOXRED1-214ENST00000532590 SYNJ1O43426 1573 aa11.36□□□□□ -0.59
FOXRED1-214ENST00000532590 ILDR1Q86SU0 546 aaPredicted RBP11.35□□□□□ -0.59
FOXRED1-214ENST00000532590 GAPVD1Q14C86 1478 aa11.35□□□□□ -0.59
FOXRED1-214ENST00000532590 SOGA1O94964 1423 aa11.34□□□□□ -0.59
FOXRED1-214ENST00000532590 MAGI1Q96QZ7 1491 aaPredicted RBP11.29□□□□□ -0.6
FOXRED1-214ENST00000532590 SYNJ2O15056 1496 aa11.27□□□□□ -0.6
FOXRED1-214ENST00000532590 GRIN2BQ13224 1484 aa11.27□□□□□ -0.6
FOXRED1-214ENST00000532590 FGD5Q6ZNL6 1462 aa11.25□□□□□ -0.61
FOXRED1-214ENST00000532590 ERCC6L2Q5T890 1561 aa11.24□□□□□ -0.61
FOXRED1-214ENST00000532590 WDR97A6NE52 1622 aa11.21□□□□□ -0.61
FOXRED1-214ENST00000532590 KDM4FA0A1W2PPD8 638 aa11.19□□□□□ -0.62
FOXRED1-214ENST00000532590 FAM69CQ0P6D2 419 aa11.17□□□□□ -0.62
FOXRED1-214ENST00000532590 KIF13AQ9H1H9 1805 aa11.16□□□□□ -0.62
FOXRED1-214ENST00000532590 CUX1P39880 1505 aa11.16□□□□□ -0.62
FOXRED1-214ENST00000532590 PBRM1Q86U86 1689 aa11.16□□□□□ -0.62
FOXRED1-214ENST00000532590 CEP170Q5SW79 1584 aa11.15□□□□□ -0.62
FOXRED1-214ENST00000532590 GRIN2AQ12879 1464 aa11.12□□□□□ -0.63
FOXRED1-214ENST00000532590 NPM1P06748 294 aaKnown RBP eCLIP11.09□□□□□ -0.63
FOXRED1-214ENST00000532590 KDM6BO15054 1643 aa11.08□□□□□ -0.64
FOXRED1-214ENST00000532590 ABCA5Q8WWZ7 1642 aa11.08□□□□□ -0.64
FOXRED1-214ENST00000532590 NUP160Q12769 1436 aa11.08□□□□□ -0.64
FOXRED1-214ENST00000532590 ABCC10Q5T3U5 1492 aa11.07□□□□□ -0.64
FOXRED1-214ENST00000532590 PRG4Q92954 1404 aaPredicted RBP11.07□□□□□ -0.64
FOXRED1-214ENST00000532590 ABCA10Q8WWZ4 1543 aa11.06□□□□□ -0.64
FOXRED1-214ENST00000532590 SHROOM2Q13796 1616 aa11.05□□□□□ -0.64
FOXRED1-214ENST00000532590 ADAMTS12P58397 1594 aa11.04□□□□□ -0.64
FOXRED1-214ENST00000532590 DIP2BQ9P265 1576 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms