RNA–Protein interactions for RNA: ENST00000532546.5

SERGEF-221, Transcript of secretion regulating guanine nucleotide exchange factor, humanhuman

TSL 3

Gene SERGEF, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERGEF-221ENST00000532546 NISCHQ9Y2I1 1504 aa30.84■■■□□ 2.53
SERGEF-221ENST00000532546 ABCC9O60706 1549 aa28.05■■■□□ 2.08
SERGEF-221ENST00000532546 CCDC180Q9P1Z9 1646 aa27.78■■■□□ 2.04
SERGEF-221ENST00000532546 RB1CC1Q8TDY2 1594 aa26.6■■□□□ 1.85
SERGEF-221ENST00000532546 DNAJC5BQ9UF47 199 aa26.46■■□□□ 1.83
SERGEF-221ENST00000532546 NACADO15069 1562 aa26.34■■□□□ 1.81
SERGEF-221ENST00000532546 DCAF8L2P0C7V8 631 aa26.3■■□□□ 1.8
SERGEF-221ENST00000532546 PABPN1Q86U42 306 aaKnown RBP eCLIP26.09■■□□□ 1.77
SERGEF-221ENST00000532546 UNC13AQ9UPW8 1703 aa25.95■■□□□ 1.74
SERGEF-221ENST00000532546 MYO15BQ96JP2 1530 aa25.86■■□□□ 1.73
SERGEF-221ENST00000532546 BICRAQ9NZM4 1560 aa25.75■■□□□ 1.71
SERGEF-221ENST00000532546 ZCCHC6Q5VYS8 1495 aaKnown RBP25.49■■□□□ 1.67
SERGEF-221ENST00000532546 DCAF1Q9Y4B6 1507 aa25.44■■□□□ 1.66
SERGEF-221ENST00000532546 SHROOM4Q9ULL8 1493 aa25.43■■□□□ 1.66
SERGEF-221ENST00000532546 SCRIBQ14160 1630 aa25.33■■□□□ 1.65
SERGEF-221ENST00000532546 CC2D2AQ9P2K1 1620 aa25.31■■□□□ 1.64
SERGEF-221ENST00000532546 CECR2Q9BXF3 1484 aa25.29■■□□□ 1.64
SERGEF-221ENST00000532546 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
SERGEF-221ENST00000532546 DNAJC5Q9H3Z4 198 aa24.53■■□□□ 1.52
SERGEF-221ENST00000532546 NCAPD3P42695 1498 aa24.3■■□□□ 1.48
SERGEF-221ENST00000532546 ERCC6Q03468 1493 aa24.29■■□□□ 1.48
SERGEF-221ENST00000532546 CUX2O14529 1486 aa24.27■■□□□ 1.48
SERGEF-221ENST00000532546 ATAD2BQ9ULI0 1458 aa24.19■■□□□ 1.46
SERGEF-221ENST00000532546 SMARCA2P51531 1590 aa24.15■■□□□ 1.46
SERGEF-221ENST00000532546 SMARCA4P51532 1647 aa24.11■■□□□ 1.45
SERGEF-221ENST00000532546 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
SERGEF-221ENST00000532546 NESP48681 1621 aa24■■□□□ 1.43
SERGEF-221ENST00000532546 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
SERGEF-221ENST00000532546 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
SERGEF-221ENST00000532546 PEG3Q9GZU2 1588 aa23.85■■□□□ 1.41
SERGEF-221ENST00000532546 LAMC3Q9Y6N6 1575 aa23.82■■□□□ 1.4
SERGEF-221ENST00000532546 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
SERGEF-221ENST00000532546 MROH2BQ7Z745 1585 aa23.76■■□□□ 1.39
SERGEF-221ENST00000532546 PDS5BQ9NTI5 1447 aa23.72■■□□□ 1.39
SERGEF-221ENST00000532546 KIF21AQ7Z4S6 1674 aa23.69■■□□□ 1.38
SERGEF-221ENST00000532546 CADPSQ9ULU8 1353 aa23.58■■□□□ 1.37
SERGEF-221ENST00000532546 MRC2Q9UBG0 1479 aa23.5■■□□□ 1.35
SERGEF-221ENST00000532546 WIZO95785 1651 aa23.48■■□□□ 1.35
SERGEF-221ENST00000532546 TRIM41Q8WV44 630 aa23.44■■□□□ 1.34
SERGEF-221ENST00000532546 WDR62O43379 1518 aa23.42■■□□□ 1.34
SERGEF-221ENST00000532546 CEP164Q9UPV0 1460 aa23.37■■□□□ 1.33
SERGEF-221ENST00000532546 FANCD2Q9BXW9 1451 aa23.31■■□□□ 1.32
SERGEF-221ENST00000532546 CFTRP13569 1480 aa23.24■■□□□ 1.31
SERGEF-221ENST00000532546 OSCARQ8IYS5 282 aa23.19■■□□□ 1.3
SERGEF-221ENST00000532546 RSF1Q96T23 1441 aaPredicted RBP23.18■■□□□ 1.3
SERGEF-221ENST00000532546 TOP2AP11388 1531 aaKnown RBP23.17■■□□□ 1.3
SERGEF-221ENST00000532546 URB2Q14146 1524 aaKnown RBP23.1■■□□□ 1.29
SERGEF-221ENST00000532546 PRDM2Q13029 1718 aa23.01■■□□□ 1.27
SERGEF-221ENST00000532546 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
SERGEF-221ENST00000532546 CCDC88BA6NC98 1476 aa22.91■■□□□ 1.26
SERGEF-221ENST00000532546 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
SERGEF-221ENST00000532546 RIMBP3CA6NJZ7 1639 aa22.84■■□□□ 1.25
SERGEF-221ENST00000532546 RIMBP3BA6NNM3 1639 aa22.84■■□□□ 1.25
SERGEF-221ENST00000532546 RIMBP3Q9UFD9 1639 aa22.84■■□□□ 1.25
SERGEF-221ENST00000532546 TOPBP1Q92547 1522 aa22.83■■□□□ 1.25
SERGEF-221ENST00000532546 ABCC8Q09428 1581 aa22.81■■□□□ 1.24
SERGEF-221ENST00000532546 ARHGEF11O15085 1522 aa22.74■■□□□ 1.23
SERGEF-221ENST00000532546 EIF4G3O43432 1585 aaKnown RBP22.74■■□□□ 1.23
SERGEF-221ENST00000532546 DNMBPQ6XZF7 1577 aa22.73■■□□□ 1.23
SERGEF-221ENST00000532546 FBLN2P98095 1184 aa22.66■■□□□ 1.22
SERGEF-221ENST00000532546 CYB5RLQ6IPT4 315 aa22.66■■□□□ 1.22
SERGEF-221ENST00000532546 AQRO60306 1485 aaKnown RBP eCLIP22.66■■□□□ 1.22
SERGEF-221ENST00000532546 CHD1O14646 1710 aa22.62■■□□□ 1.21
SERGEF-221ENST00000532546 TARBP1Q13395 1621 aaKnown RBP22.61■■□□□ 1.21
SERGEF-221ENST00000532546 POLA1P09884 1462 aaPredicted RBP22.58■■□□□ 1.2
SERGEF-221ENST00000532546 TRHP20396 242 aaPredicted RBP22.54■■□□□ 1.2
SERGEF-221ENST00000532546 SOGA1O94964 1423 aa22.52■■□□□ 1.2
SERGEF-221ENST00000532546 RAD54L2Q9Y4B4 1467 aa22.51■■□□□ 1.19
SERGEF-221ENST00000532546 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
SERGEF-221ENST00000532546 ARAP1Q96P48 1450 aa22.48■■□□□ 1.19
SERGEF-221ENST00000532546 CHMP7Q8WUX9 453 aaPredicted RBP22.43■■□□□ 1.18
SERGEF-221ENST00000532546 SNAPC4Q5SXM2 1469 aa22.42■■□□□ 1.18
SERGEF-221ENST00000532546 FGD5Q6ZNL6 1462 aa22.42■■□□□ 1.18
SERGEF-221ENST00000532546 WDR97A6NE52 1622 aa22.41■■□□□ 1.18
SERGEF-221ENST00000532546 SYNJ1O43426 1573 aa22.36■■□□□ 1.17
SERGEF-221ENST00000532546 MAGI1Q96QZ7 1491 aaPredicted RBP22.35■■□□□ 1.17
SERGEF-221ENST00000532546 GRIN2BQ13224 1484 aa22.34■■□□□ 1.17
SERGEF-221ENST00000532546 CUX1P39880 1505 aa22.33■■□□□ 1.17
SERGEF-221ENST00000532546 CLASP1Q7Z460 1538 aa22.32■■□□□ 1.16
SERGEF-221ENST00000532546 SYNJ2O15056 1496 aa22.28■■□□□ 1.16
SERGEF-221ENST00000532546 PBRM1Q86U86 1689 aa22.23■■□□□ 1.15
SERGEF-221ENST00000532546 GAPVD1Q14C86 1478 aa22.22■■□□□ 1.15
SERGEF-221ENST00000532546 ABCA10Q8WWZ4 1543 aa22.14■■□□□ 1.13
SERGEF-221ENST00000532546 ABCA5Q8WWZ7 1642 aa22.11■■□□□ 1.13
SERGEF-221ENST00000532546 SUPT5HO00267 1087 aaKnown RBP22.1■■□□□ 1.13
SERGEF-221ENST00000532546 AEBP2Q6ZN18 517 aaPredicted RBP22.09■■□□□ 1.13
SERGEF-221ENST00000532546 WRNQ14191 1432 aaPredicted RBP eCLIP22.05■■□□□ 1.12
SERGEF-221ENST00000532546 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
SERGEF-221ENST00000532546 ADAMTS12P58397 1594 aa21.97■■□□□ 1.11
SERGEF-221ENST00000532546 ERCC6L2Q5T890 1561 aa21.95■■□□□ 1.11
SERGEF-221ENST00000532546 CEP170Q5SW79 1584 aa21.95■■□□□ 1.1
SERGEF-221ENST00000532546 FHAD1B1AJZ9 1412 aa21.94■■□□□ 1.1
SERGEF-221ENST00000532546 NUP160Q12769 1436 aa21.94■■□□□ 1.1
SERGEF-221ENST00000532546 TOP2BQ02880 1626 aa21.93■■□□□ 1.1
SERGEF-221ENST00000532546 BIVM-ERCC5R4GMW8 1640 aa21.93■■□□□ 1.1
SERGEF-221ENST00000532546 ERICH3Q5RHP9 1530 aa21.87■■□□□ 1.09
SERGEF-221ENST00000532546 SHROOM2Q13796 1616 aa21.86■■□□□ 1.09
SERGEF-221ENST00000532546 PRG4Q92954 1404 aaPredicted RBP21.8■■□□□ 1.08
SERGEF-221ENST00000532546 JPH4Q96JJ6 628 aa21.79■■□□□ 1.08
SERGEF-221ENST00000532546 NPM1P06748 294 aaKnown RBP eCLIP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms