RNA–Protein interactions for RNA: ENST00000532460.5

CSRP1-216, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSRP1, Length 1,469 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-216ENST00000532460 NISCHQ9Y2I1 1504 aa26.17■■□□□ 1.78
CSRP1-216ENST00000532460 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
CSRP1-216ENST00000532460 ABCC9O60706 1549 aa23.15■■□□□ 1.3
CSRP1-216ENST00000532460 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
CSRP1-216ENST00000532460 NACADO15069 1562 aa22.05■■□□□ 1.12
CSRP1-216ENST00000532460 DCAF8L2P0C7V8 631 aa22.04■■□□□ 1.12
CSRP1-216ENST00000532460 MYO15BQ96JP2 1530 aa21.87■■□□□ 1.09
CSRP1-216ENST00000532460 ZCCHC6Q5VYS8 1495 aaKnown RBP21.72■■□□□ 1.07
CSRP1-216ENST00000532460 DCAF1Q9Y4B6 1507 aa21.65■■□□□ 1.06
CSRP1-216ENST00000532460 PABPN1Q86U42 306 aaKnown RBP eCLIP21.64■■□□□ 1.06
CSRP1-216ENST00000532460 DNAJC5BQ9UF47 199 aa21.62■■□□□ 1.05
CSRP1-216ENST00000532460 UNC13AQ9UPW8 1703 aa21.52■■□□□ 1.04
CSRP1-216ENST00000532460 BICRAQ9NZM4 1560 aa21.47■■□□□ 1.03
CSRP1-216ENST00000532460 SHROOM4Q9ULL8 1493 aa21.24■□□□□ 0.99
CSRP1-216ENST00000532460 SCRIBQ14160 1630 aa21.24■□□□□ 0.99
CSRP1-216ENST00000532460 EIF4G1Q04637 1599 aaKnown RBP20.92■□□□□ 0.94
CSRP1-216ENST00000532460 CC2D2AQ9P2K1 1620 aa20.9■□□□□ 0.94
CSRP1-216ENST00000532460 CECR2Q9BXF3 1484 aa20.85■□□□□ 0.93
CSRP1-216ENST00000532460 NCAPD3P42695 1498 aa20.41■□□□□ 0.86
CSRP1-216ENST00000532460 ATAD2BQ9ULI0 1458 aa20.35■□□□□ 0.85
CSRP1-216ENST00000532460 SMARCA4P51532 1647 aa20.31■□□□□ 0.84
CSRP1-216ENST00000532460 BAZ1AQ9NRL2 1556 aaPredicted RBP20.29■□□□□ 0.84
CSRP1-216ENST00000532460 SMARCA2P51531 1590 aa20.27■□□□□ 0.84
CSRP1-216ENST00000532460 HMGXB3Q12766 1538 aa20.21■□□□□ 0.83
CSRP1-216ENST00000532460 PEG3Q9GZU2 1588 aa20.16■□□□□ 0.82
CSRP1-216ENST00000532460 MROH2BQ7Z745 1585 aa20.15■□□□□ 0.82
CSRP1-216ENST00000532460 BAZ1BQ9UIG0 1483 aaKnown RBP20.13■□□□□ 0.81
CSRP1-216ENST00000532460 ERCC6Q03468 1493 aa19.97■□□□□ 0.79
CSRP1-216ENST00000532460 NESP48681 1621 aa19.95■□□□□ 0.78
CSRP1-216ENST00000532460 CUX2O14529 1486 aa19.89■□□□□ 0.77
CSRP1-216ENST00000532460 WIZO95785 1651 aa19.87■□□□□ 0.77
CSRP1-216ENST00000532460 RSF1Q96T23 1441 aaPredicted RBP19.86■□□□□ 0.77
CSRP1-216ENST00000532460 LAMC3Q9Y6N6 1575 aa19.85■□□□□ 0.77
CSRP1-216ENST00000532460 CADPSQ9ULU8 1353 aa19.81■□□□□ 0.76
CSRP1-216ENST00000532460 PDS5BQ9NTI5 1447 aa19.78■□□□□ 0.76
CSRP1-216ENST00000532460 DNAJC5Q9H3Z4 198 aa19.71■□□□□ 0.75
CSRP1-216ENST00000532460 TOP2AP11388 1531 aaKnown RBP19.66■□□□□ 0.74
CSRP1-216ENST00000532460 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
CSRP1-216ENST00000532460 KIF21AQ7Z4S6 1674 aa19.61■□□□□ 0.73
CSRP1-216ENST00000532460 SUPT5HO00267 1087 aaKnown RBP19.61■□□□□ 0.73
CSRP1-216ENST00000532460 CFTRP13569 1480 aa19.61■□□□□ 0.73
CSRP1-216ENST00000532460 MRC2Q9UBG0 1479 aa19.55■□□□□ 0.72
CSRP1-216ENST00000532460 FANCD2Q9BXW9 1451 aa19.52■□□□□ 0.72
CSRP1-216ENST00000532460 CEP164Q9UPV0 1460 aa19.51■□□□□ 0.71
CSRP1-216ENST00000532460 CCDC88BA6NC98 1476 aa19.49■□□□□ 0.71
CSRP1-216ENST00000532460 WDR62O43379 1518 aa19.48■□□□□ 0.71
CSRP1-216ENST00000532460 URB2Q14146 1524 aaKnown RBP19.34■□□□□ 0.69
CSRP1-216ENST00000532460 PRDM2Q13029 1718 aa19.25■□□□□ 0.67
CSRP1-216ENST00000532460 ABCC8Q09428 1581 aa19.19■□□□□ 0.66
CSRP1-216ENST00000532460 TOPBP1Q92547 1522 aa19.17■□□□□ 0.66
CSRP1-216ENST00000532460 IFT140Q96RY7 1462 aa19.14■□□□□ 0.66
CSRP1-216ENST00000532460 DNMBPQ6XZF7 1577 aa19.1■□□□□ 0.65
CSRP1-216ENST00000532460 OSCARQ8IYS5 282 aa19.09■□□□□ 0.65
CSRP1-216ENST00000532460 ZNF608Q9ULD9 1512 aaPredicted RBP19.06■□□□□ 0.64
CSRP1-216ENST00000532460 POLA1P09884 1462 aaPredicted RBP18.99■□□□□ 0.63
CSRP1-216ENST00000532460 SOGA1O94964 1423 aa18.96■□□□□ 0.63
CSRP1-216ENST00000532460 TARBP1Q13395 1621 aaKnown RBP18.96■□□□□ 0.63
CSRP1-216ENST00000532460 AQRO60306 1485 aaKnown RBP eCLIP18.95■□□□□ 0.62
CSRP1-216ENST00000532460 RAD54L2Q9Y4B4 1467 aa18.93■□□□□ 0.62
CSRP1-216ENST00000532460 CHIC1Q5VXU3 224 aa18.92■□□□□ 0.62
CSRP1-216ENST00000532460 EIF4G3O43432 1585 aaKnown RBP18.91■□□□□ 0.62
CSRP1-216ENST00000532460 CUX1P39880 1505 aa18.91■□□□□ 0.62
CSRP1-216ENST00000532460 FGD5Q6ZNL6 1462 aa18.9■□□□□ 0.62
CSRP1-216ENST00000532460 TDRD9Q8NDG6 1382 aaKnown RBP18.88■□□□□ 0.61
CSRP1-216ENST00000532460 TRIM41Q8WV44 630 aa18.85■□□□□ 0.61
CSRP1-216ENST00000532460 WDR97A6NE52 1622 aa18.79■□□□□ 0.6
CSRP1-216ENST00000532460 FBLN2P98095 1184 aa18.79■□□□□ 0.6
CSRP1-216ENST00000532460 GRIN2BQ13224 1484 aa18.74■□□□□ 0.59
CSRP1-216ENST00000532460 ABCA10Q8WWZ4 1543 aa18.73■□□□□ 0.59
CSRP1-216ENST00000532460 SNAPC4Q5SXM2 1469 aa18.72■□□□□ 0.59
CSRP1-216ENST00000532460 CHMP7Q8WUX9 453 aaPredicted RBP18.72■□□□□ 0.59
CSRP1-216ENST00000532460 WRNQ14191 1432 aaPredicted RBP eCLIP18.72■□□□□ 0.59
CSRP1-216ENST00000532460 MAGI1Q96QZ7 1491 aaPredicted RBP18.71■□□□□ 0.59
CSRP1-216ENST00000532460 GAPVD1Q14C86 1478 aa18.7■□□□□ 0.58
CSRP1-216ENST00000532460 CHD1O14646 1710 aa18.69■□□□□ 0.58
CSRP1-216ENST00000532460 ARHGEF11O15085 1522 aa18.68■□□□□ 0.58
CSRP1-216ENST00000532460 RIMBP3CA6NJZ7 1639 aa18.68■□□□□ 0.58
CSRP1-216ENST00000532460 RIMBP3BA6NNM3 1639 aa18.68■□□□□ 0.58
CSRP1-216ENST00000532460 RIMBP3Q9UFD9 1639 aa18.68■□□□□ 0.58
CSRP1-216ENST00000532460 TOP2BQ02880 1626 aa18.66■□□□□ 0.58
CSRP1-216ENST00000532460 SYNJ2O15056 1496 aa18.65■□□□□ 0.58
CSRP1-216ENST00000532460 BIVM-ERCC5R4GMW8 1640 aa18.62■□□□□ 0.57
CSRP1-216ENST00000532460 SYNJ1O43426 1573 aa18.62■□□□□ 0.57
CSRP1-216ENST00000532460 CYB5RLQ6IPT4 315 aa18.61■□□□□ 0.57
CSRP1-216ENST00000532460 ABCA5Q8WWZ7 1642 aa18.61■□□□□ 0.57
CSRP1-216ENST00000532460 CLASP1Q7Z460 1538 aa18.56■□□□□ 0.56
CSRP1-216ENST00000532460 PBRM1Q86U86 1689 aa18.56■□□□□ 0.56
CSRP1-216ENST00000532460 ARAP1Q96P48 1450 aa18.52■□□□□ 0.55
CSRP1-216ENST00000532460 FHAD1B1AJZ9 1412 aa18.49■□□□□ 0.55
CSRP1-216ENST00000532460 ERICH3Q5RHP9 1530 aa18.48■□□□□ 0.55
CSRP1-216ENST00000532460 GRIN2AQ12879 1464 aa18.48■□□□□ 0.55
CSRP1-216ENST00000532460 ADAMTS12P58397 1594 aa18.44■□□□□ 0.54
CSRP1-216ENST00000532460 NUP160Q12769 1436 aa18.44■□□□□ 0.54
CSRP1-216ENST00000532460 CEP170Q5SW79 1584 aa18.37■□□□□ 0.53
CSRP1-216ENST00000532460 IGF1RP08069 1367 aa18.36■□□□□ 0.53
CSRP1-216ENST00000532460 KIF27Q86VH2 1401 aa18.35■□□□□ 0.53
CSRP1-216ENST00000532460 TRHP20396 242 aaPredicted RBP18.31■□□□□ 0.52
CSRP1-216ENST00000532460 JPH4Q96JJ6 628 aa18.31■□□□□ 0.52
CSRP1-216ENST00000532460 ERCC6L2Q5T890 1561 aa18.28■□□□□ 0.52
CSRP1-216ENST00000532460 SHROOM2Q13796 1616 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms