RNA–Protein interactions for RNA: ENST00000532181.5

SSH3-208, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-208ENST00000532181 NISCHQ9Y2I1 1504 aa29.92■■■□□ 2.38
SSH3-208ENST00000532181 CCDC180Q9P1Z9 1646 aa26.61■■□□□ 1.85
SSH3-208ENST00000532181 ABCC9O60706 1549 aa26.54■■□□□ 1.84
SSH3-208ENST00000532181 RB1CC1Q8TDY2 1594 aa25.25■■□□□ 1.63
SSH3-208ENST00000532181 DCAF8L2P0C7V8 631 aa25.21■■□□□ 1.63
SSH3-208ENST00000532181 NACADO15069 1562 aa25.1■■□□□ 1.61
SSH3-208ENST00000532181 ZCCHC6Q5VYS8 1495 aaKnown RBP24.93■■□□□ 1.58
SSH3-208ENST00000532181 PABPN1Q86U42 306 aaKnown RBP eCLIP24.78■■□□□ 1.56
SSH3-208ENST00000532181 MYO15BQ96JP2 1530 aa24.76■■□□□ 1.55
SSH3-208ENST00000532181 UNC13AQ9UPW8 1703 aa24.76■■□□□ 1.55
SSH3-208ENST00000532181 DNAJC5BQ9UF47 199 aa24.75■■□□□ 1.55
SSH3-208ENST00000532181 DCAF1Q9Y4B6 1507 aa24.68■■□□□ 1.54
SSH3-208ENST00000532181 BICRAQ9NZM4 1560 aa24.56■■□□□ 1.52
SSH3-208ENST00000532181 SCRIBQ14160 1630 aa24.38■■□□□ 1.49
SSH3-208ENST00000532181 SHROOM4Q9ULL8 1493 aa24.08■■□□□ 1.45
SSH3-208ENST00000532181 CC2D2AQ9P2K1 1620 aa23.94■■□□□ 1.42
SSH3-208ENST00000532181 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
SSH3-208ENST00000532181 CECR2Q9BXF3 1484 aa23.83■■□□□ 1.41
SSH3-208ENST00000532181 SMARCA4P51532 1647 aa23.22■■□□□ 1.31
SSH3-208ENST00000532181 NCAPD3P42695 1498 aa23.19■■□□□ 1.3
SSH3-208ENST00000532181 ATAD2BQ9ULI0 1458 aa23.19■■□□□ 1.3
SSH3-208ENST00000532181 MROH2BQ7Z745 1585 aa23.13■■□□□ 1.29
SSH3-208ENST00000532181 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
SSH3-208ENST00000532181 SMARCA2P51531 1590 aa23.09■■□□□ 1.29
SSH3-208ENST00000532181 HMGXB3Q12766 1538 aa23.02■■□□□ 1.28
SSH3-208ENST00000532181 BAZ1BQ9UIG0 1483 aaKnown RBP22.97■■□□□ 1.27
SSH3-208ENST00000532181 PEG3Q9GZU2 1588 aa22.93■■□□□ 1.26
SSH3-208ENST00000532181 RSF1Q96T23 1441 aaPredicted RBP22.89■■□□□ 1.25
SSH3-208ENST00000532181 NESP48681 1621 aa22.87■■□□□ 1.25
SSH3-208ENST00000532181 WIZO95785 1651 aa22.85■■□□□ 1.25
SSH3-208ENST00000532181 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
SSH3-208ENST00000532181 CUX2O14529 1486 aa22.66■■□□□ 1.22
SSH3-208ENST00000532181 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
SSH3-208ENST00000532181 KIF21AQ7Z4S6 1674 aa22.55■■□□□ 1.2
SSH3-208ENST00000532181 TOP2AP11388 1531 aaKnown RBP22.54■■□□□ 1.2
SSH3-208ENST00000532181 CADPSQ9ULU8 1353 aa22.52■■□□□ 1.2
SSH3-208ENST00000532181 THOC2Q8NI27 1593 aaKnown RBP22.52■■□□□ 1.2
SSH3-208ENST00000532181 PDS5BQ9NTI5 1447 aa22.49■■□□□ 1.19
SSH3-208ENST00000532181 DNAJC5Q9H3Z4 198 aa22.47■■□□□ 1.19
SSH3-208ENST00000532181 SUPT5HO00267 1087 aaKnown RBP22.39■■□□□ 1.17
SSH3-208ENST00000532181 CCDC88BA6NC98 1476 aa22.36■■□□□ 1.17
SSH3-208ENST00000532181 MRC2Q9UBG0 1479 aa22.32■■□□□ 1.16
SSH3-208ENST00000532181 CFTRP13569 1480 aa22.3■■□□□ 1.16
SSH3-208ENST00000532181 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
SSH3-208ENST00000532181 CEP164Q9UPV0 1460 aa22.28■■□□□ 1.16
SSH3-208ENST00000532181 WDR62O43379 1518 aa22.24■■□□□ 1.15
SSH3-208ENST00000532181 URB2Q14146 1524 aaKnown RBP22.11■■□□□ 1.13
SSH3-208ENST00000532181 PRDM2Q13029 1718 aa22.09■■□□□ 1.13
SSH3-208ENST00000532181 TOPBP1Q92547 1522 aa21.89■■□□□ 1.09
SSH3-208ENST00000532181 ZNF608Q9ULD9 1512 aaPredicted RBP21.83■■□□□ 1.09
SSH3-208ENST00000532181 DNMBPQ6XZF7 1577 aa21.8■■□□□ 1.08
SSH3-208ENST00000532181 IFT140Q96RY7 1462 aa21.8■■□□□ 1.08
SSH3-208ENST00000532181 ABCC8Q09428 1581 aa21.77■■□□□ 1.08
SSH3-208ENST00000532181 OSCARQ8IYS5 282 aa21.72■■□□□ 1.07
SSH3-208ENST00000532181 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
SSH3-208ENST00000532181 POLA1P09884 1462 aaPredicted RBP21.68■■□□□ 1.06
SSH3-208ENST00000532181 TARBP1Q13395 1621 aaKnown RBP21.68■■□□□ 1.06
SSH3-208ENST00000532181 EIF4G3O43432 1585 aaKnown RBP21.67■■□□□ 1.06
SSH3-208ENST00000532181 CUX1P39880 1505 aa21.67■■□□□ 1.06
SSH3-208ENST00000532181 AQRO60306 1485 aaKnown RBP eCLIP21.66■■□□□ 1.06
SSH3-208ENST00000532181 RAD54L2Q9Y4B4 1467 aa21.65■■□□□ 1.06
SSH3-208ENST00000532181 FGD5Q6ZNL6 1462 aa21.59■■□□□ 1.05
SSH3-208ENST00000532181 SOGA1O94964 1423 aa21.59■■□□□ 1.05
SSH3-208ENST00000532181 TDRD9Q8NDG6 1382 aaKnown RBP21.56■■□□□ 1.04
SSH3-208ENST00000532181 CHD1O14646 1710 aa21.51■■□□□ 1.03
SSH3-208ENST00000532181 WRNQ14191 1432 aaPredicted RBP eCLIP21.5■■□□□ 1.03
SSH3-208ENST00000532181 FBLN2P98095 1184 aa21.5■■□□□ 1.03
SSH3-208ENST00000532181 SYNJ1O43426 1573 aa21.49■■□□□ 1.03
SSH3-208ENST00000532181 RIMBP3CA6NJZ7 1639 aa21.44■■□□□ 1.02
SSH3-208ENST00000532181 RIMBP3BA6NNM3 1639 aa21.44■■□□□ 1.02
SSH3-208ENST00000532181 RIMBP3Q9UFD9 1639 aa21.44■■□□□ 1.02
SSH3-208ENST00000532181 TOP2BQ02880 1626 aa21.43■■□□□ 1.02
SSH3-208ENST00000532181 SNAPC4Q5SXM2 1469 aa21.42■■□□□ 1.02
SSH3-208ENST00000532181 BIVM-ERCC5R4GMW8 1640 aa21.41■■□□□ 1.02
SSH3-208ENST00000532181 WDR97A6NE52 1622 aa21.4■■□□□ 1.02
SSH3-208ENST00000532181 ARHGEF11O15085 1522 aa21.38■■□□□ 1.01
SSH3-208ENST00000532181 GRIN2BQ13224 1484 aa21.35■■□□□ 1.01
SSH3-208ENST00000532181 GAPVD1Q14C86 1478 aa21.32■■□□□ 1
SSH3-208ENST00000532181 CHMP7Q8WUX9 453 aaPredicted RBP21.32■■□□□ 1
SSH3-208ENST00000532181 PBRM1Q86U86 1689 aa21.31■■□□□ 1
SSH3-208ENST00000532181 ABCA10Q8WWZ4 1543 aa21.31■■□□□ 1
SSH3-208ENST00000532181 MAGI1Q96QZ7 1491 aaPredicted RBP21.3■■□□□ 1
SSH3-208ENST00000532181 ABCA5Q8WWZ7 1642 aa21.27■■□□□ 1
SSH3-208ENST00000532181 CYB5RLQ6IPT4 315 aa21.26■□□□□ 0.99
SSH3-208ENST00000532181 SYNJ2O15056 1496 aa21.25■□□□□ 0.99
SSH3-208ENST00000532181 CLASP1Q7Z460 1538 aa21.21■□□□□ 0.99
SSH3-208ENST00000532181 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
SSH3-208ENST00000532181 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
SSH3-208ENST00000532181 GRIN2AQ12879 1464 aa21.08■□□□□ 0.97
SSH3-208ENST00000532181 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
SSH3-208ENST00000532181 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
SSH3-208ENST00000532181 FHAD1B1AJZ9 1412 aa21.04■□□□□ 0.96
SSH3-208ENST00000532181 CEP170Q5SW79 1584 aa21.03■□□□□ 0.96
SSH3-208ENST00000532181 IGF1RP08069 1367 aa21.03■□□□□ 0.96
SSH3-208ENST00000532181 KIF27Q86VH2 1401 aa21■□□□□ 0.95
SSH3-208ENST00000532181 NUP160Q12769 1436 aa20.99■□□□□ 0.95
SSH3-208ENST00000532181 ERCC6L2Q5T890 1561 aa20.98■□□□□ 0.95
SSH3-208ENST00000532181 CHIC1Q5VXU3 224 aa20.98■□□□□ 0.95
SSH3-208ENST00000532181 TRHP20396 242 aaPredicted RBP20.96■□□□□ 0.95
SSH3-208ENST00000532181 SHROOM2Q13796 1616 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms