RNA–Protein interactions for RNA: ENST00000531913.1

CD3E-206, Transcript of CD3e molecule, humanhuman

TSL 2

Gene CD3E, Length 1,439 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD3E-206ENST00000531913 NISCHQ9Y2I1 1504 aa22.2■■□□□ 1.14
CD3E-206ENST00000531913 ABCC9O60706 1549 aa21.36■■□□□ 1.01
CD3E-206ENST00000531913 DNAJC5BQ9UF47 199 aa20.85■□□□□ 0.93
CD3E-206ENST00000531913 CCDC180Q9P1Z9 1646 aa20.37■□□□□ 0.85
CD3E-206ENST00000531913 RB1CC1Q8TDY2 1594 aa19.85■□□□□ 0.77
CD3E-206ENST00000531913 DNAJC5Q9H3Z4 198 aa19.79■□□□□ 0.76
CD3E-206ENST00000531913 PABPN1Q86U42 306 aaKnown RBP eCLIP19.7■□□□□ 0.74
CD3E-206ENST00000531913 AEBP2Q6ZN18 517 aaPredicted RBP19.51■□□□□ 0.71
CD3E-206ENST00000531913 UNC13AQ9UPW8 1703 aa19.47■□□□□ 0.71
CD3E-206ENST00000531913 NACADO15069 1562 aa19.44■□□□□ 0.7
CD3E-206ENST00000531913 BICRAQ9NZM4 1560 aa19.33■□□□□ 0.69
CD3E-206ENST00000531913 CECR2Q9BXF3 1484 aa19.3■□□□□ 0.68
CD3E-206ENST00000531913 CC2D2AQ9P2K1 1620 aa19.24■□□□□ 0.67
CD3E-206ENST00000531913 DCAF8L2P0C7V8 631 aa19.2■□□□□ 0.66
CD3E-206ENST00000531913 EIF4G1Q04637 1599 aaKnown RBP18.93■□□□□ 0.62
CD3E-206ENST00000531913 SHROOM4Q9ULL8 1493 aa18.87■□□□□ 0.61
CD3E-206ENST00000531913 MYO15BQ96JP2 1530 aa18.79■□□□□ 0.6
CD3E-206ENST00000531913 CUX2O14529 1486 aa18.73■□□□□ 0.59
CD3E-206ENST00000531913 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
CD3E-206ENST00000531913 SCRIBQ14160 1630 aa18.58■□□□□ 0.56
CD3E-206ENST00000531913 ERCC6Q03468 1493 aa18.49■□□□□ 0.55
CD3E-206ENST00000531913 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
CD3E-206ENST00000531913 DCAF1Q9Y4B6 1507 aa18.22■□□□□ 0.51
CD3E-206ENST00000531913 ZCCHC6Q5VYS8 1495 aaKnown RBP18.21■□□□□ 0.51
CD3E-206ENST00000531913 THOC2Q8NI27 1593 aaKnown RBP18.09■□□□□ 0.49
CD3E-206ENST00000531913 NESP48681 1621 aa18.08■□□□□ 0.48
CD3E-206ENST00000531913 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
CD3E-206ENST00000531913 NCAPD3P42695 1498 aa17.94■□□□□ 0.46
CD3E-206ENST00000531913 KIF21AQ7Z4S6 1674 aa17.84■□□□□ 0.45
CD3E-206ENST00000531913 BAZ1AQ9NRL2 1556 aaPredicted RBP17.82■□□□□ 0.44
CD3E-206ENST00000531913 ATAD2BQ9ULI0 1458 aa17.79■□□□□ 0.44
CD3E-206ENST00000531913 HMGXB3Q12766 1538 aa17.76■□□□□ 0.43
CD3E-206ENST00000531913 LAMC3Q9Y6N6 1575 aa17.74■□□□□ 0.43
CD3E-206ENST00000531913 OSCARQ8IYS5 282 aa17.68■□□□□ 0.42
CD3E-206ENST00000531913 RIMBP3CA6NJZ7 1639 aa17.68■□□□□ 0.42
CD3E-206ENST00000531913 RIMBP3BA6NNM3 1639 aa17.68■□□□□ 0.42
CD3E-206ENST00000531913 RIMBP3Q9UFD9 1639 aa17.68■□□□□ 0.42
CD3E-206ENST00000531913 PDS5BQ9NTI5 1447 aa17.63■□□□□ 0.41
CD3E-206ENST00000531913 MRC2Q9UBG0 1479 aa17.59■□□□□ 0.41
CD3E-206ENST00000531913 BAZ1BQ9UIG0 1483 aaKnown RBP17.59■□□□□ 0.41
CD3E-206ENST00000531913 WDR62O43379 1518 aa17.58■□□□□ 0.4
CD3E-206ENST00000531913 SMARCA4P51532 1647 aa17.56■□□□□ 0.4
CD3E-206ENST00000531913 TRHP20396 242 aaPredicted RBP17.55■□□□□ 0.4
CD3E-206ENST00000531913 ARHGEF11O15085 1522 aa17.49■□□□□ 0.39
CD3E-206ENST00000531913 CYB5RLQ6IPT4 315 aa17.38■□□□□ 0.37
CD3E-206ENST00000531913 CADPSQ9ULU8 1353 aa17.36■□□□□ 0.37
CD3E-206ENST00000531913 PEG3Q9GZU2 1588 aa17.34■□□□□ 0.37
CD3E-206ENST00000531913 CEP164Q9UPV0 1460 aa17.33■□□□□ 0.37
CD3E-206ENST00000531913 ARAP1Q96P48 1450 aa17.25■□□□□ 0.35
CD3E-206ENST00000531913 FANCD2Q9BXW9 1451 aa17.22■□□□□ 0.35
CD3E-206ENST00000531913 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
CD3E-206ENST00000531913 ILDR1Q86SU0 546 aaPredicted RBP17.15■□□□□ 0.34
CD3E-206ENST00000531913 MROH2BQ7Z745 1585 aa17.14■□□□□ 0.34
CD3E-206ENST00000531913 ZNF608Q9ULD9 1512 aaPredicted RBP17.12■□□□□ 0.33
CD3E-206ENST00000531913 CHD1O14646 1710 aa17.07■□□□□ 0.32
CD3E-206ENST00000531913 RSF1Q96T23 1441 aaPredicted RBP17.01■□□□□ 0.31
CD3E-206ENST00000531913 EIF4G3O43432 1585 aaKnown RBP17■□□□□ 0.31
CD3E-206ENST00000531913 IFT140Q96RY7 1462 aa16.98■□□□□ 0.31
CD3E-206ENST00000531913 CFTRP13569 1480 aa16.97■□□□□ 0.31
CD3E-206ENST00000531913 WIZO95785 1651 aa16.92■□□□□ 0.3
CD3E-206ENST00000531913 FBLN2P98095 1184 aa16.91■□□□□ 0.3
CD3E-206ENST00000531913 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.28
CD3E-206ENST00000531913 CLASP1Q7Z460 1538 aa16.79■□□□□ 0.28
CD3E-206ENST00000531913 PRDM2Q13029 1718 aa16.79■□□□□ 0.28
CD3E-206ENST00000531913 TOPBP1Q92547 1522 aa16.79■□□□□ 0.28
CD3E-206ENST00000531913 TARBP1Q13395 1621 aaKnown RBP16.72■□□□□ 0.27
CD3E-206ENST00000531913 SYNJ1O43426 1573 aa16.69■□□□□ 0.26
CD3E-206ENST00000531913 GAPVD1Q14C86 1478 aa16.68■□□□□ 0.26
CD3E-206ENST00000531913 SNAPC4Q5SXM2 1469 aa16.64■□□□□ 0.25
CD3E-206ENST00000531913 KDM4FA0A1W2PPD8 638 aa16.64■□□□□ 0.25
CD3E-206ENST00000531913 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
CD3E-206ENST00000531913 SENP3Q9H4L4 574 aaPredicted RBP16.62■□□□□ 0.25
CD3E-206ENST00000531913 KIF13AQ9H1H9 1805 aa16.61■□□□□ 0.25
CD3E-206ENST00000531913 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
CD3E-206ENST00000531913 TOP2AP11388 1531 aaKnown RBP16.59■□□□□ 0.25
CD3E-206ENST00000531913 CHMP7Q8WUX9 453 aaPredicted RBP16.57■□□□□ 0.24
CD3E-206ENST00000531913 TDRD9Q8NDG6 1382 aaKnown RBP16.55■□□□□ 0.24
CD3E-206ENST00000531913 POLA1P09884 1462 aaPredicted RBP16.55■□□□□ 0.24
CD3E-206ENST00000531913 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
CD3E-206ENST00000531913 ERCC6L2Q5T890 1561 aa16.51■□□□□ 0.23
CD3E-206ENST00000531913 MAGI1Q96QZ7 1491 aaPredicted RBP16.49■□□□□ 0.23
CD3E-206ENST00000531913 SYNJ2O15056 1496 aa16.47■□□□□ 0.23
CD3E-206ENST00000531913 HECW2Q9P2P5 1572 aa16.44■□□□□ 0.22
CD3E-206ENST00000531913 KDM6BO15054 1643 aa16.44■□□□□ 0.22
CD3E-206ENST00000531913 SOGA1O94964 1423 aa16.43■□□□□ 0.22
CD3E-206ENST00000531913 WDR97A6NE52 1622 aa16.42■□□□□ 0.22
CD3E-206ENST00000531913 GRIN2BQ13224 1484 aa16.4■□□□□ 0.22
CD3E-206ENST00000531913 CCDC88BA6NC98 1476 aa16.4■□□□□ 0.22
CD3E-206ENST00000531913 PHF23Q9BUL5 403 aaPredicted RBP16.37■□□□□ 0.21
CD3E-206ENST00000531913 PBRM1Q86U86 1689 aa16.36■□□□□ 0.21
CD3E-206ENST00000531913 FAM69CQ0P6D2 419 aa16.36■□□□□ 0.21
CD3E-206ENST00000531913 CEP170Q5SW79 1584 aa16.35■□□□□ 0.21
CD3E-206ENST00000531913 FBXO41Q8TF61 875 aa16.35■□□□□ 0.21
CD3E-206ENST00000531913 ADGRL1O94910 1474 aa16.33■□□□□ 0.2
CD3E-206ENST00000531913 ABCC10Q5T3U5 1492 aa16.33■□□□□ 0.2
CD3E-206ENST00000531913 FGD5Q6ZNL6 1462 aa16.33■□□□□ 0.2
CD3E-206ENST00000531913 DIP2BQ9P265 1576 aa16.31■□□□□ 0.2
CD3E-206ENST00000531913 LMTK3Q96Q04 1460 aa16.27■□□□□ 0.2
CD3E-206ENST00000531913 TSPOAP1O95153 1857 aa16.27■□□□□ 0.19
CD3E-206ENST00000531913 SHROOM2Q13796 1616 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms