RNA–Protein interactions for RNA: ENST00000531888.1

ROBO3-217, Transcript of roundabout guidance receptor 3, humanhuman

TSL 1 (best)

Gene ROBO3, Length 562 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROBO3-217ENST00000531888 NISCHQ9Y2I1 1504 aa31.34■■■□□ 2.61
ROBO3-217ENST00000531888 ABCC9O60706 1549 aa28.99■■■□□ 2.23
ROBO3-217ENST00000531888 DNAJC5BQ9UF47 199 aa28.28■■■□□ 2.12
ROBO3-217ENST00000531888 CCDC180Q9P1Z9 1646 aa27.98■■■□□ 2.07
ROBO3-217ENST00000531888 RB1CC1Q8TDY2 1594 aa27.09■■□□□ 1.93
ROBO3-217ENST00000531888 PABPN1Q86U42 306 aaKnown RBP eCLIP26.86■■□□□ 1.89
ROBO3-217ENST00000531888 DNAJC5Q9H3Z4 198 aa26.74■■□□□ 1.87
ROBO3-217ENST00000531888 NACADO15069 1562 aa26.66■■□□□ 1.86
ROBO3-217ENST00000531888 DCAF8L2P0C7V8 631 aa26.54■■□□□ 1.84
ROBO3-217ENST00000531888 UNC13AQ9UPW8 1703 aa26.49■■□□□ 1.83
ROBO3-217ENST00000531888 BICRAQ9NZM4 1560 aa26.4■■□□□ 1.82
ROBO3-217ENST00000531888 CECR2Q9BXF3 1484 aa26.23■■□□□ 1.79
ROBO3-217ENST00000531888 CC2D2AQ9P2K1 1620 aa26.13■■□□□ 1.77
ROBO3-217ENST00000531888 MYO15BQ96JP2 1530 aa26.07■■□□□ 1.76
ROBO3-217ENST00000531888 ZCCHC6Q5VYS8 1495 aaKnown RBP26■■□□□ 1.75
ROBO3-217ENST00000531888 SHROOM4Q9ULL8 1493 aa25.88■■□□□ 1.73
ROBO3-217ENST00000531888 DCAF1Q9Y4B6 1507 aa25.81■■□□□ 1.72
ROBO3-217ENST00000531888 EIF4G1Q04637 1599 aaKnown RBP25.8■■□□□ 1.72
ROBO3-217ENST00000531888 SCRIBQ14160 1630 aa25.65■■□□□ 1.7
ROBO3-217ENST00000531888 CUX2O14529 1486 aa25.43■■□□□ 1.66
ROBO3-217ENST00000531888 ERCC6Q03468 1493 aa25.07■■□□□ 1.6
ROBO3-217ENST00000531888 TRIM41Q8WV44 630 aa25.04■■□□□ 1.6
ROBO3-217ENST00000531888 NCAPD3P42695 1498 aa24.67■■□□□ 1.54
ROBO3-217ENST00000531888 NESP48681 1621 aa24.61■■□□□ 1.53
ROBO3-217ENST00000531888 THOC2Q8NI27 1593 aaKnown RBP24.54■■□□□ 1.52
ROBO3-217ENST00000531888 ATAD2BQ9ULI0 1458 aa24.43■■□□□ 1.5
ROBO3-217ENST00000531888 SMARCA4P51532 1647 aa24.43■■□□□ 1.5
ROBO3-217ENST00000531888 HMGXB3Q12766 1538 aa24.33■■□□□ 1.49
ROBO3-217ENST00000531888 SMARCA2P51531 1590 aa24.3■■□□□ 1.48
ROBO3-217ENST00000531888 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
ROBO3-217ENST00000531888 LAMC3Q9Y6N6 1575 aa24.24■■□□□ 1.47
ROBO3-217ENST00000531888 KIF21AQ7Z4S6 1674 aa24.21■■□□□ 1.47
ROBO3-217ENST00000531888 MROH2BQ7Z745 1585 aa24.21■■□□□ 1.47
ROBO3-217ENST00000531888 BAZ1BQ9UIG0 1483 aaKnown RBP24.19■■□□□ 1.46
ROBO3-217ENST00000531888 PDS5BQ9NTI5 1447 aa24.15■■□□□ 1.46
ROBO3-217ENST00000531888 OSCARQ8IYS5 282 aa24.13■■□□□ 1.45
ROBO3-217ENST00000531888 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
ROBO3-217ENST00000531888 MRC2Q9UBG0 1479 aa23.99■■□□□ 1.43
ROBO3-217ENST00000531888 WDR62O43379 1518 aa23.97■■□□□ 1.43
ROBO3-217ENST00000531888 WIZO95785 1651 aa23.92■■□□□ 1.42
ROBO3-217ENST00000531888 RIMBP3CA6NJZ7 1639 aa23.89■■□□□ 1.42
ROBO3-217ENST00000531888 RIMBP3BA6NNM3 1639 aa23.89■■□□□ 1.42
ROBO3-217ENST00000531888 RIMBP3Q9UFD9 1639 aa23.89■■□□□ 1.42
ROBO3-217ENST00000531888 CADPSQ9ULU8 1353 aa23.86■■□□□ 1.41
ROBO3-217ENST00000531888 AEBP2Q6ZN18 517 aaPredicted RBP23.8■■□□□ 1.4
ROBO3-217ENST00000531888 RSF1Q96T23 1441 aaPredicted RBP23.75■■□□□ 1.39
ROBO3-217ENST00000531888 ARHGEF11O15085 1522 aa23.7■■□□□ 1.38
ROBO3-217ENST00000531888 TRHP20396 242 aaPredicted RBP23.7■■□□□ 1.38
ROBO3-217ENST00000531888 CEP164Q9UPV0 1460 aa23.66■■□□□ 1.38
ROBO3-217ENST00000531888 CYB5RLQ6IPT4 315 aa23.64■■□□□ 1.37
ROBO3-217ENST00000531888 TOP2AP11388 1531 aaKnown RBP23.57■■□□□ 1.36
ROBO3-217ENST00000531888 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
ROBO3-217ENST00000531888 CFTRP13569 1480 aa23.49■■□□□ 1.35
ROBO3-217ENST00000531888 URB2Q14146 1524 aaKnown RBP23.46■■□□□ 1.35
ROBO3-217ENST00000531888 ARAP1Q96P48 1450 aa23.41■■□□□ 1.34
ROBO3-217ENST00000531888 CCDC88BA6NC98 1476 aa23.36■■□□□ 1.33
ROBO3-217ENST00000531888 ZNF608Q9ULD9 1512 aaPredicted RBP23.35■■□□□ 1.33
ROBO3-217ENST00000531888 IFT140Q96RY7 1462 aa23.25■■□□□ 1.31
ROBO3-217ENST00000531888 PRDM2Q13029 1718 aa23.19■■□□□ 1.3
ROBO3-217ENST00000531888 CHD1O14646 1710 aa23.14■■□□□ 1.3
ROBO3-217ENST00000531888 EIF4G3O43432 1585 aaKnown RBP23.11■■□□□ 1.29
ROBO3-217ENST00000531888 TOPBP1Q92547 1522 aa23.05■■□□□ 1.28
ROBO3-217ENST00000531888 FBLN2P98095 1184 aa23.05■■□□□ 1.28
ROBO3-217ENST00000531888 AQRO60306 1485 aaKnown RBP eCLIP23■■□□□ 1.27
ROBO3-217ENST00000531888 ILDR1Q86SU0 546 aaPredicted RBP23■■□□□ 1.27
ROBO3-217ENST00000531888 DNMBPQ6XZF7 1577 aa22.94■■□□□ 1.26
ROBO3-217ENST00000531888 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
ROBO3-217ENST00000531888 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
ROBO3-217ENST00000531888 SUPT5HO00267 1087 aaKnown RBP22.88■■□□□ 1.25
ROBO3-217ENST00000531888 TARBP1Q13395 1621 aaKnown RBP22.88■■□□□ 1.25
ROBO3-217ENST00000531888 POLA1P09884 1462 aaPredicted RBP22.83■■□□□ 1.25
ROBO3-217ENST00000531888 RAD54L2Q9Y4B4 1467 aa22.8■■□□□ 1.24
ROBO3-217ENST00000531888 SYNJ1O43426 1573 aa22.74■■□□□ 1.23
ROBO3-217ENST00000531888 GAPVD1Q14C86 1478 aa22.73■■□□□ 1.23
ROBO3-217ENST00000531888 CUX1P39880 1505 aa22.73■■□□□ 1.23
ROBO3-217ENST00000531888 TDRD9Q8NDG6 1382 aaKnown RBP22.73■■□□□ 1.23
ROBO3-217ENST00000531888 SOGA1O94964 1423 aa22.73■■□□□ 1.23
ROBO3-217ENST00000531888 CHMP7Q8WUX9 453 aaPredicted RBP22.72■■□□□ 1.23
ROBO3-217ENST00000531888 FGD5Q6ZNL6 1462 aa22.72■■□□□ 1.23
ROBO3-217ENST00000531888 SNAPC4Q5SXM2 1469 aa22.7■■□□□ 1.22
ROBO3-217ENST00000531888 MAGI1Q96QZ7 1491 aaPredicted RBP22.6■■□□□ 1.21
ROBO3-217ENST00000531888 KDM4FA0A1W2PPD8 638 aa22.59■■□□□ 1.21
ROBO3-217ENST00000531888 SYNJ2O15056 1496 aa22.54■■□□□ 1.2
ROBO3-217ENST00000531888 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
ROBO3-217ENST00000531888 KIF13AQ9H1H9 1805 aa22.52■■□□□ 1.2
ROBO3-217ENST00000531888 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
ROBO3-217ENST00000531888 ERCC6L2Q5T890 1561 aa22.47■■□□□ 1.19
ROBO3-217ENST00000531888 ABCA10Q8WWZ4 1543 aa22.41■■□□□ 1.18
ROBO3-217ENST00000531888 PBRM1Q86U86 1689 aa22.41■■□□□ 1.18
ROBO3-217ENST00000531888 ABCA5Q8WWZ7 1642 aa22.39■■□□□ 1.17
ROBO3-217ENST00000531888 WRNQ14191 1432 aaPredicted RBP eCLIP22.37■■□□□ 1.17
ROBO3-217ENST00000531888 TOP2BQ02880 1626 aa22.35■■□□□ 1.17
ROBO3-217ENST00000531888 BIVM-ERCC5R4GMW8 1640 aa22.33■■□□□ 1.17
ROBO3-217ENST00000531888 FAM69CQ0P6D2 419 aa22.31■■□□□ 1.16
ROBO3-217ENST00000531888 CEP170Q5SW79 1584 aa22.3■■□□□ 1.16
ROBO3-217ENST00000531888 ABCC10Q5T3U5 1492 aa22.27■■□□□ 1.16
ROBO3-217ENST00000531888 KDM6BO15054 1643 aa22.23■■□□□ 1.15
ROBO3-217ENST00000531888 GRIN2AQ12879 1464 aa22.22■■□□□ 1.15
ROBO3-217ENST00000531888 ADAMTS12P58397 1594 aa22.21■■□□□ 1.15
ROBO3-217ENST00000531888 SHROOM2Q13796 1616 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms