RNA–Protein interactions for RNA: ENST00000531866.1

ZNF408-204, Transcript of zinc finger protein 408, humanhuman

TSL 2

Gene ZNF408, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408-204ENST00000531866 NISCHQ9Y2I1 1504 aa38.7■■■■□ 3.79
ZNF408-204ENST00000531866 ABCC9O60706 1549 aa34.86■■■■□ 3.17
ZNF408-204ENST00000531866 CCDC180Q9P1Z9 1646 aa34.72■■■■□ 3.15
ZNF408-204ENST00000531866 RB1CC1Q8TDY2 1594 aa33.16■■■□□ 2.9
ZNF408-204ENST00000531866 DCAF8L2P0C7V8 631 aa33■■■□□ 2.87
ZNF408-204ENST00000531866 NACADO15069 1562 aa32.9■■■□□ 2.86
ZNF408-204ENST00000531866 DNAJC5BQ9UF47 199 aa32.72■■■□□ 2.83
ZNF408-204ENST00000531866 PABPN1Q86U42 306 aaKnown RBP eCLIP32.52■■■□□ 2.8
ZNF408-204ENST00000531866 MYO15BQ96JP2 1530 aa32.37■■■□□ 2.77
ZNF408-204ENST00000531866 UNC13AQ9UPW8 1703 aa32.28■■■□□ 2.76
ZNF408-204ENST00000531866 BICRAQ9NZM4 1560 aa32.07■■■□□ 2.72
ZNF408-204ENST00000531866 ZCCHC6Q5VYS8 1495 aaKnown RBP32.02■■■□□ 2.72
ZNF408-204ENST00000531866 DCAF1Q9Y4B6 1507 aa31.94■■■□□ 2.7
ZNF408-204ENST00000531866 SHROOM4Q9ULL8 1493 aa31.71■■■□□ 2.67
ZNF408-204ENST00000531866 SCRIBQ14160 1630 aa31.67■■■□□ 2.66
ZNF408-204ENST00000531866 CC2D2AQ9P2K1 1620 aa31.44■■■□□ 2.62
ZNF408-204ENST00000531866 CECR2Q9BXF3 1484 aa31.42■■■□□ 2.62
ZNF408-204ENST00000531866 EIF4G1Q04637 1599 aaKnown RBP31.35■■■□□ 2.61
ZNF408-204ENST00000531866 NCAPD3P42695 1498 aa30.37■■■□□ 2.45
ZNF408-204ENST00000531866 ATAD2BQ9ULI0 1458 aa30.25■■■□□ 2.43
ZNF408-204ENST00000531866 SMARCA2P51531 1590 aa30.21■■■□□ 2.43
ZNF408-204ENST00000531866 ERCC6Q03468 1493 aa30.19■■■□□ 2.42
ZNF408-204ENST00000531866 SMARCA4P51532 1647 aa30.18■■■□□ 2.42
ZNF408-204ENST00000531866 DNAJC5Q9H3Z4 198 aa30.18■■■□□ 2.42
ZNF408-204ENST00000531866 HMGXB3Q12766 1538 aa30.1■■■□□ 2.41
ZNF408-204ENST00000531866 BAZ1AQ9NRL2 1556 aaPredicted RBP30.08■■■□□ 2.41
ZNF408-204ENST00000531866 CUX2O14529 1486 aa30.06■■■□□ 2.4
ZNF408-204ENST00000531866 BAZ1BQ9UIG0 1483 aaKnown RBP30.02■■■□□ 2.4
ZNF408-204ENST00000531866 NESP48681 1621 aa29.88■■■□□ 2.37
ZNF408-204ENST00000531866 PEG3Q9GZU2 1588 aa29.85■■■□□ 2.37
ZNF408-204ENST00000531866 MROH2BQ7Z745 1585 aa29.8■■■□□ 2.36
ZNF408-204ENST00000531866 LAMC3Q9Y6N6 1575 aa29.69■■■□□ 2.34
ZNF408-204ENST00000531866 PDS5BQ9NTI5 1447 aa29.62■■■□□ 2.33
ZNF408-204ENST00000531866 THOC2Q8NI27 1593 aaKnown RBP29.52■■■□□ 2.32
ZNF408-204ENST00000531866 CADPSQ9ULU8 1353 aa29.5■■■□□ 2.31
ZNF408-204ENST00000531866 KIF21AQ7Z4S6 1674 aa29.47■■■□□ 2.31
ZNF408-204ENST00000531866 WIZO95785 1651 aa29.44■■■□□ 2.3
ZNF408-204ENST00000531866 MRC2Q9UBG0 1479 aa29.29■■■□□ 2.28
ZNF408-204ENST00000531866 RSF1Q96T23 1441 aaPredicted RBP29.2■■■□□ 2.27
ZNF408-204ENST00000531866 CEP164Q9UPV0 1460 aa29.18■■■□□ 2.26
ZNF408-204ENST00000531866 WDR62O43379 1518 aa29.15■■■□□ 2.26
ZNF408-204ENST00000531866 FANCD2Q9BXW9 1451 aa29.14■■■□□ 2.26
ZNF408-204ENST00000531866 CFTRP13569 1480 aa29.09■■■□□ 2.25
ZNF408-204ENST00000531866 TOP2AP11388 1531 aaKnown RBP29.08■■■□□ 2.25
ZNF408-204ENST00000531866 TRIM41Q8WV44 630 aa28.93■■■□□ 2.22
ZNF408-204ENST00000531866 OSCARQ8IYS5 282 aa28.84■■■□□ 2.21
ZNF408-204ENST00000531866 URB2Q14146 1524 aaKnown RBP28.84■■■□□ 2.21
ZNF408-204ENST00000531866 CCDC88BA6NC98 1476 aa28.78■■■□□ 2.2
ZNF408-204ENST00000531866 PRDM2Q13029 1718 aa28.74■■■□□ 2.19
ZNF408-204ENST00000531866 IFT140Q96RY7 1462 aa28.6■■■□□ 2.17
ZNF408-204ENST00000531866 ABCC8Q09428 1581 aa28.58■■■□□ 2.17
ZNF408-204ENST00000531866 TOPBP1Q92547 1522 aa28.54■■■□□ 2.16
ZNF408-204ENST00000531866 ZNF608Q9ULD9 1512 aaPredicted RBP28.5■■■□□ 2.15
ZNF408-204ENST00000531866 DNMBPQ6XZF7 1577 aa28.43■■■□□ 2.14
ZNF408-204ENST00000531866 EIF4G3O43432 1585 aaKnown RBP28.32■■■□□ 2.12
ZNF408-204ENST00000531866 FBLN2P98095 1184 aa28.31■■■□□ 2.12
ZNF408-204ENST00000531866 AQRO60306 1485 aaKnown RBP eCLIP28.31■■■□□ 2.122e-6■■■■□ 20.7
ZNF408-204ENST00000531866 RIMBP3CA6NJZ7 1639 aa28.27■■■□□ 2.12
ZNF408-204ENST00000531866 RIMBP3BA6NNM3 1639 aa28.27■■■□□ 2.12
ZNF408-204ENST00000531866 RIMBP3Q9UFD9 1639 aa28.27■■■□□ 2.12
ZNF408-204ENST00000531866 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
ZNF408-204ENST00000531866 POLA1P09884 1462 aaPredicted RBP28.24■■■□□ 2.11
ZNF408-204ENST00000531866 SOGA1O94964 1423 aa28.21■■■□□ 2.11
ZNF408-204ENST00000531866 ARHGEF11O15085 1522 aa28.19■■■□□ 2.1
ZNF408-204ENST00000531866 RAD54L2Q9Y4B4 1467 aa28.16■■■□□ 2.1
ZNF408-204ENST00000531866 CYB5RLQ6IPT4 315 aa28.16■■■□□ 2.1
ZNF408-204ENST00000531866 TDRD9Q8NDG6 1382 aaKnown RBP28.15■■■□□ 2.1
ZNF408-204ENST00000531866 CHD1O14646 1710 aa28.13■■■□□ 2.09
ZNF408-204ENST00000531866 FGD5Q6ZNL6 1462 aa28.08■■■□□ 2.09
ZNF408-204ENST00000531866 SUPT5HO00267 1087 aaKnown RBP28.07■■■□□ 2.08
ZNF408-204ENST00000531866 CHMP7Q8WUX9 453 aaPredicted RBP28.07■■■□□ 2.08
ZNF408-204ENST00000531866 CUX1P39880 1505 aa28■■■□□ 2.07
ZNF408-204ENST00000531866 WDR97A6NE52 1622 aa28■■■□□ 2.07
ZNF408-204ENST00000531866 SNAPC4Q5SXM2 1469 aa27.98■■■□□ 2.07
ZNF408-204ENST00000531866 TRHP20396 242 aaPredicted RBP27.95■■■□□ 2.06
ZNF408-204ENST00000531866 GRIN2BQ13224 1484 aa27.94■■■□□ 2.06
ZNF408-204ENST00000531866 MAGI1Q96QZ7 1491 aaPredicted RBP27.92■■■□□ 2.06
ZNF408-204ENST00000531866 ARAP1Q96P48 1450 aa27.89■■■□□ 2.05
ZNF408-204ENST00000531866 SYNJ1O43426 1573 aa27.86■■■□□ 2.05
ZNF408-204ENST00000531866 GAPVD1Q14C86 1478 aa27.84■■■□□ 2.05
ZNF408-204ENST00000531866 SYNJ2O15056 1496 aa27.83■■■□□ 2.05
ZNF408-204ENST00000531866 CLASP1Q7Z460 1538 aa27.77■■■□□ 2.04
ZNF408-204ENST00000531866 ABCA10Q8WWZ4 1543 aa27.75■■■□□ 2.03
ZNF408-204ENST00000531866 PBRM1Q86U86 1689 aa27.74■■■□□ 2.03
ZNF408-204ENST00000531866 WRNQ14191 1432 aaPredicted RBP eCLIP27.72■■■□□ 2.03
ZNF408-204ENST00000531866 ABCA5Q8WWZ7 1642 aa27.64■■■□□ 2.02
ZNF408-204ENST00000531866 TOP2BQ02880 1626 aa27.56■■■□□ 2
ZNF408-204ENST00000531866 GRIN2AQ12879 1464 aa27.54■■■□□ 2
ZNF408-204ENST00000531866 BIVM-ERCC5R4GMW8 1640 aa27.52■■■□□ 2
ZNF408-204ENST00000531866 FHAD1B1AJZ9 1412 aa27.49■■□□□ 1.99
ZNF408-204ENST00000531866 ADAMTS12P58397 1594 aa27.46■■□□□ 1.99
ZNF408-204ENST00000531866 NUP160Q12769 1436 aa27.42■■□□□ 1.98
ZNF408-204ENST00000531866 ERICH3Q5RHP9 1530 aa27.41■■□□□ 1.98
ZNF408-204ENST00000531866 CEP170Q5SW79 1584 aa27.39■■□□□ 1.97
ZNF408-204ENST00000531866 ERCC6L2Q5T890 1561 aa27.33■■□□□ 1.97
ZNF408-204ENST00000531866 JPH4Q96JJ6 628 aa27.3■■□□□ 1.96
ZNF408-204ENST00000531866 SHROOM2Q13796 1616 aa27.26■■□□□ 1.95
ZNF408-204ENST00000531866 PRG4Q92954 1404 aaPredicted RBP27.25■■□□□ 1.95
ZNF408-204ENST00000531866 AEBP2Q6ZN18 517 aaPredicted RBP27.22■■□□□ 1.95
ZNF408-204ENST00000531866 NPM1P06748 294 aaKnown RBP eCLIP27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms