RNA–Protein interactions for RNA: ENST00000531610.5

CHRNB3-202, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

TSL 4

Gene CHRNB3, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-202ENST00000531610 NISCHQ9Y2I1 1504 aa15.98■□□□□ 0.15
CHRNB3-202ENST00000531610 AEBP2Q6ZN18 517 aaPredicted RBP15.93■□□□□ 0.14
CHRNB3-202ENST00000531610 CHIC1Q5VXU3 224 aa15.5■□□□□ 0.07
CHRNB3-202ENST00000531610 ABCC9O60706 1549 aa14.45□□□□□ -0.1
CHRNB3-202ENST00000531610 CCDC180Q9P1Z9 1646 aa14.38□□□□□ -0.11
CHRNB3-202ENST00000531610 RB1CC1Q8TDY2 1594 aa13.68□□□□□ -0.22
CHRNB3-202ENST00000531610 SENP3Q9H4L4 574 aaPredicted RBP13.62□□□□□ -0.23
CHRNB3-202ENST00000531610 PHF23Q9BUL5 403 aaPredicted RBP13.57□□□□□ -0.24
CHRNB3-202ENST00000531610 DNAJC5BQ9UF47 199 aa13.56□□□□□ -0.24
CHRNB3-202ENST00000531610 NACADO15069 1562 aa13.55□□□□□ -0.24
CHRNB3-202ENST00000531610 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
CHRNB3-202ENST00000531610 UNC13AQ9UPW8 1703 aa13.51□□□□□ -0.25
CHRNB3-202ENST00000531610 PABPN1Q86U42 306 aaKnown RBP eCLIP13.42□□□□□ -0.26
CHRNB3-202ENST00000531610 BICRAQ9NZM4 1560 aa13.33□□□□□ -0.28
CHRNB3-202ENST00000531610 MYO15BQ96JP2 1530 aa13.29□□□□□ -0.28
CHRNB3-202ENST00000531610 ZCCHC6Q5VYS8 1495 aaKnown RBP13.24□□□□□ -0.29
CHRNB3-202ENST00000531610 SCRIBQ14160 1630 aa13.17□□□□□ -0.3
CHRNB3-202ENST00000531610 DCAF1Q9Y4B6 1507 aa13.14□□□□□ -0.31
CHRNB3-202ENST00000531610 CC2D2AQ9P2K1 1620 aa13.05□□□□□ -0.32
CHRNB3-202ENST00000531610 SHROOM4Q9ULL8 1493 aa13.03□□□□□ -0.32
CHRNB3-202ENST00000531610 EIF4G1Q04637 1599 aaKnown RBP12.99□□□□□ -0.33
CHRNB3-202ENST00000531610 CECR2Q9BXF3 1484 aa12.97□□□□□ -0.33
CHRNB3-202ENST00000531610 FOXD1Q16676 465 aa12.6□□□□□ -0.39
CHRNB3-202ENST00000531610 PLPPR3Q6T4P5 718 aa12.57□□□□□ -0.4
CHRNB3-202ENST00000531610 SMARCA4P51532 1647 aa12.51□□□□□ -0.41
CHRNB3-202ENST00000531610 NCAPD3P42695 1498 aa12.49□□□□□ -0.41
CHRNB3-202ENST00000531610 ATAD2BQ9ULI0 1458 aa12.48□□□□□ -0.41
CHRNB3-202ENST00000531610 SMARCA2P51531 1590 aa12.43□□□□□ -0.42
CHRNB3-202ENST00000531610 ERCC6Q03468 1493 aa12.43□□□□□ -0.42
CHRNB3-202ENST00000531610 HMGXB3Q12766 1538 aa12.42□□□□□ -0.42
CHRNB3-202ENST00000531610 NESP48681 1621 aa12.42□□□□□ -0.42
CHRNB3-202ENST00000531610 DNAJC5Q9H3Z4 198 aa12.41□□□□□ -0.42
CHRNB3-202ENST00000531610 BAZ1AQ9NRL2 1556 aaPredicted RBP12.39□□□□□ -0.43
CHRNB3-202ENST00000531610 CUX2O14529 1486 aa12.38□□□□□ -0.43
CHRNB3-202ENST00000531610 BAZ1BQ9UIG0 1483 aaKnown RBP12.37□□□□□ -0.43
CHRNB3-202ENST00000531610 MROH2BQ7Z745 1585 aa12.35□□□□□ -0.43
CHRNB3-202ENST00000531610 PEG3Q9GZU2 1588 aa12.34□□□□□ -0.43
CHRNB3-202ENST00000531610 KIF21AQ7Z4S6 1674 aa12.3□□□□□ -0.44
CHRNB3-202ENST00000531610 THOC2Q8NI27 1593 aaKnown RBP12.29□□□□□ -0.44
CHRNB3-202ENST00000531610 LAMC3Q9Y6N6 1575 aa12.26□□□□□ -0.45
CHRNB3-202ENST00000531610 WIZO95785 1651 aa12.25□□□□□ -0.45
CHRNB3-202ENST00000531610 PDS5BQ9NTI5 1447 aa12.13□□□□□ -0.47
CHRNB3-202ENST00000531610 CADPSQ9ULU8 1353 aa12.11□□□□□ -0.47
CHRNB3-202ENST00000531610 MRC2Q9UBG0 1479 aa12.08□□□□□ -0.47
CHRNB3-202ENST00000531610 WDR62O43379 1518 aa12.06□□□□□ -0.48
CHRNB3-202ENST00000531610 RSF1Q96T23 1441 aaPredicted RBP12.04□□□□□ -0.48
CHRNB3-202ENST00000531610 CEP164Q9UPV0 1460 aa12.03□□□□□ -0.48
CHRNB3-202ENST00000531610 TOP2AP11388 1531 aaKnown RBP12.03□□□□□ -0.48
CHRNB3-202ENST00000531610 FANCD2Q9BXW9 1451 aa12.02□□□□□ -0.49
CHRNB3-202ENST00000531610 PPP6R1Q9UPN7 881 aa12□□□□□ -0.49
CHRNB3-202ENST00000531610 ADRA2BP18089 450 aa11.99□□□□□ -0.49
CHRNB3-202ENST00000531610 CFTRP13569 1480 aa11.98□□□□□ -0.49
CHRNB3-202ENST00000531610 PRDM2Q13029 1718 aa11.97□□□□□ -0.49
CHRNB3-202ENST00000531610 URB2Q14146 1524 aaKnown RBP11.95□□□□□ -0.5
CHRNB3-202ENST00000531610 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
CHRNB3-202ENST00000531610 CCDC88BA6NC98 1476 aa11.89□□□□□ -0.51
CHRNB3-202ENST00000531610 PIAS4Q8N2W9 510 aaPredicted RBP11.88□□□□□ -0.51
CHRNB3-202ENST00000531610 ZNF608Q9ULD9 1512 aaPredicted RBP11.82□□□□□ -0.52
CHRNB3-202ENST00000531610 TOPBP1Q92547 1522 aa11.8□□□□□ -0.52
CHRNB3-202ENST00000531610 OSCARQ8IYS5 282 aa11.79□□□□□ -0.52
CHRNB3-202ENST00000531610 EIF4G3O43432 1585 aaKnown RBP11.78□□□□□ -0.52
CHRNB3-202ENST00000531610 IFT140Q96RY7 1462 aa11.77□□□□□ -0.52
CHRNB3-202ENST00000531610 RIMBP3CA6NJZ7 1639 aa11.76□□□□□ -0.53
CHRNB3-202ENST00000531610 RIMBP3BA6NNM3 1639 aa11.76□□□□□ -0.53
CHRNB3-202ENST00000531610 RIMBP3Q9UFD9 1639 aa11.76□□□□□ -0.53
CHRNB3-202ENST00000531610 DNMBPQ6XZF7 1577 aa11.75□□□□□ -0.53
CHRNB3-202ENST00000531610 CHD1O14646 1710 aa11.74□□□□□ -0.53
CHRNB3-202ENST00000531610 MSH5O43196 834 aa11.73□□□□□ -0.53
CHRNB3-202ENST00000531610 TARBP1Q13395 1621 aaKnown RBP11.72□□□□□ -0.53
CHRNB3-202ENST00000531610 ABCC8Q09428 1581 aa11.7□□□□□ -0.54
CHRNB3-202ENST00000531610 AQRO60306 1485 aaKnown RBP eCLIP11.69□□□□□ -0.54
CHRNB3-202ENST00000531610 ARHGEF11O15085 1522 aa11.68□□□□□ -0.54
CHRNB3-202ENST00000531610 POLA1P09884 1462 aaPredicted RBP11.68□□□□□ -0.54
CHRNB3-202ENST00000531610 RAD54L2Q9Y4B4 1467 aa11.66□□□□□ -0.54
CHRNB3-202ENST00000531610 FBLN2P98095 1184 aa11.61□□□□□ -0.55
CHRNB3-202ENST00000531610 FGD5Q6ZNL6 1462 aa11.61□□□□□ -0.55
CHRNB3-202ENST00000531610 CUX1P39880 1505 aa11.6□□□□□ -0.55
CHRNB3-202ENST00000531610 TDRD9Q8NDG6 1382 aaKnown RBP11.6□□□□□ -0.55
CHRNB3-202ENST00000531610 SOGA1O94964 1423 aa11.59□□□□□ -0.55
CHRNB3-202ENST00000531610 WDR97A6NE52 1622 aa11.58□□□□□ -0.56
CHRNB3-202ENST00000531610 SNAPC4Q5SXM2 1469 aa11.57□□□□□ -0.56
CHRNB3-202ENST00000531610 CYB5RLQ6IPT4 315 aa11.57□□□□□ -0.56
CHRNB3-202ENST00000531610 ARAP1Q96P48 1450 aa11.57□□□□□ -0.56
CHRNB3-202ENST00000531610 PBRM1Q86U86 1689 aa11.55□□□□□ -0.56
CHRNB3-202ENST00000531610 CLASP1Q7Z460 1538 aa11.52□□□□□ -0.57
CHRNB3-202ENST00000531610 SUPT5HO00267 1087 aaKnown RBP11.52□□□□□ -0.57
CHRNB3-202ENST00000531610 GRIN2BQ13224 1484 aa11.5□□□□□ -0.57
CHRNB3-202ENST00000531610 SYNJ1O43426 1573 aa11.5□□□□□ -0.57
CHRNB3-202ENST00000531610 MAGI1Q96QZ7 1491 aaPredicted RBP11.49□□□□□ -0.57
CHRNB3-202ENST00000531610 ABCA5Q8WWZ7 1642 aa11.48□□□□□ -0.57
CHRNB3-202ENST00000531610 CHMP7Q8WUX9 453 aaPredicted RBP11.47□□□□□ -0.57
CHRNB3-202ENST00000531610 SYNJ2O15056 1496 aa11.46□□□□□ -0.57
CHRNB3-202ENST00000531610 GAPVD1Q14C86 1478 aa11.46□□□□□ -0.57
CHRNB3-202ENST00000531610 TRHP20396 242 aaPredicted RBP11.45□□□□□ -0.58
CHRNB3-202ENST00000531610 ABCA10Q8WWZ4 1543 aa11.44□□□□□ -0.58
CHRNB3-202ENST00000531610 BIVM-ERCC5R4GMW8 1640 aa11.42□□□□□ -0.58
CHRNB3-202ENST00000531610 ADAMTS12P58397 1594 aa11.4□□□□□ -0.58
CHRNB3-202ENST00000531610 ERCC6L2Q5T890 1561 aa11.4□□□□□ -0.58
CHRNB3-202ENST00000531610 TOP2BQ02880 1626 aa11.39□□□□□ -0.59
CHRNB3-202ENST00000531610 CEP170Q5SW79 1584 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms