RNA–Protein interactions for RNA: ENST00000531572.1

EIF3F-206, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

TSL 2

Gene EIF3F, Length 485 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-206ENST00000531572 NISCHQ9Y2I1 1504 aa20.12■□□□□ 0.81
EIF3F-206ENST00000531572 ABCC9O60706 1549 aa18.58■□□□□ 0.56
EIF3F-206ENST00000531572 CCDC180Q9P1Z9 1646 aa18.24■□□□□ 0.51
EIF3F-206ENST00000531572 DNAJC5BQ9UF47 199 aa17.88■□□□□ 0.45
EIF3F-206ENST00000531572 AEBP2Q6ZN18 517 aaPredicted RBP17.81■□□□□ 0.44
EIF3F-206ENST00000531572 RB1CC1Q8TDY2 1594 aa17.59■□□□□ 0.41
EIF3F-206ENST00000531572 NACADO15069 1562 aa17.4■□□□□ 0.38
EIF3F-206ENST00000531572 PABPN1Q86U42 306 aaKnown RBP eCLIP17.23■□□□□ 0.35
EIF3F-206ENST00000531572 MYO15BQ96JP2 1530 aa17.12■□□□□ 0.33
EIF3F-206ENST00000531572 DCAF8L2P0C7V8 631 aa17.06■□□□□ 0.32
EIF3F-206ENST00000531572 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
EIF3F-206ENST00000531572 UNC13AQ9UPW8 1703 aa17.05■□□□□ 0.32
EIF3F-206ENST00000531572 SHROOM4Q9ULL8 1493 aa16.95■□□□□ 0.3
EIF3F-206ENST00000531572 CHIC1Q5VXU3 224 aa16.88■□□□□ 0.29
EIF3F-206ENST00000531572 DNAJC5Q9H3Z4 198 aa16.85■□□□□ 0.29
EIF3F-206ENST00000531572 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
EIF3F-206ENST00000531572 CC2D2AQ9P2K1 1620 aa16.79■□□□□ 0.28
EIF3F-206ENST00000531572 DCAF1Q9Y4B6 1507 aa16.7■□□□□ 0.26
EIF3F-206ENST00000531572 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
EIF3F-206ENST00000531572 ZCCHC6Q5VYS8 1495 aaKnown RBP16.57■□□□□ 0.24
EIF3F-206ENST00000531572 SCRIBQ14160 1630 aa16.45■□□□□ 0.22
EIF3F-206ENST00000531572 CUX2O14529 1486 aa16.34■□□□□ 0.21
EIF3F-206ENST00000531572 NCAPD3P42695 1498 aa16.11■□□□□ 0.17
EIF3F-206ENST00000531572 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
EIF3F-206ENST00000531572 ATAD2BQ9ULI0 1458 aa15.93■□□□□ 0.14
EIF3F-206ENST00000531572 HMGXB3Q12766 1538 aa15.9■□□□□ 0.14
EIF3F-206ENST00000531572 SMARCA2P51531 1590 aa15.87■□□□□ 0.13
EIF3F-206ENST00000531572 NESP48681 1621 aa15.83■□□□□ 0.12
EIF3F-206ENST00000531572 THOC2Q8NI27 1593 aaKnown RBP15.79■□□□□ 0.12
EIF3F-206ENST00000531572 LAMC3Q9Y6N6 1575 aa15.76■□□□□ 0.11
EIF3F-206ENST00000531572 TRIM41Q8WV44 630 aa15.75■□□□□ 0.11
EIF3F-206ENST00000531572 SMARCA4P51532 1647 aa15.74■□□□□ 0.11
EIF3F-206ENST00000531572 BAZ1BQ9UIG0 1483 aaKnown RBP15.71■□□□□ 0.11
EIF3F-206ENST00000531572 PDS5BQ9NTI5 1447 aa15.71■□□□□ 0.11
EIF3F-206ENST00000531572 PEG3Q9GZU2 1588 aa15.7■□□□□ 0.1
EIF3F-206ENST00000531572 BAZ1AQ9NRL2 1556 aaPredicted RBP15.66■□□□□ 0.1
EIF3F-206ENST00000531572 KIF21AQ7Z4S6 1674 aa15.57■□□□□ 0.08
EIF3F-206ENST00000531572 CADPSQ9ULU8 1353 aa15.57■□□□□ 0.08
EIF3F-206ENST00000531572 MRC2Q9UBG0 1479 aa15.54■□□□□ 0.08
EIF3F-206ENST00000531572 WDR62O43379 1518 aa15.53■□□□□ 0.08
EIF3F-206ENST00000531572 OSCARQ8IYS5 282 aa15.53■□□□□ 0.08
EIF3F-206ENST00000531572 MROH2BQ7Z745 1585 aa15.44■□□□□ 0.06
EIF3F-206ENST00000531572 CEP164Q9UPV0 1460 aa15.38■□□□□ 0.05
EIF3F-206ENST00000531572 FANCD2Q9BXW9 1451 aa15.33■□□□□ 0.04
EIF3F-206ENST00000531572 CFTRP13569 1480 aa15.29■□□□□ 0.04
EIF3F-206ENST00000531572 RIMBP3CA6NJZ7 1639 aa15.24■□□□□ 0.03
EIF3F-206ENST00000531572 RIMBP3BA6NNM3 1639 aa15.24■□□□□ 0.03
EIF3F-206ENST00000531572 RIMBP3Q9UFD9 1639 aa15.24■□□□□ 0.03
EIF3F-206ENST00000531572 SENP3Q9H4L4 574 aaPredicted RBP15.23■□□□□ 0.03
EIF3F-206ENST00000531572 URB2Q14146 1524 aaKnown RBP15.21■□□□□ 0.03
EIF3F-206ENST00000531572 ARHGEF11O15085 1522 aa15.19■□□□□ 0.02
EIF3F-206ENST00000531572 WIZO95785 1651 aa15.18■□□□□ 0.02
EIF3F-206ENST00000531572 IFT140Q96RY7 1462 aa15.14■□□□□ 0.01
EIF3F-206ENST00000531572 CYB5RLQ6IPT4 315 aa15.1■□□□□ 0.01
EIF3F-206ENST00000531572 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
EIF3F-206ENST00000531572 TRHP20396 242 aaPredicted RBP15.05■□□□□ -0
EIF3F-206ENST00000531572 ABCC8Q09428 1581 aa15.04■□□□□ -0
EIF3F-206ENST00000531572 TOP2AP11388 1531 aaKnown RBP15.04■□□□□ -0
EIF3F-206ENST00000531572 RSF1Q96T23 1441 aaPredicted RBP15.04■□□□□ -0
EIF3F-206ENST00000531572 PHF23Q9BUL5 403 aaPredicted RBP15.01□□□□□ -0.01
EIF3F-206ENST00000531572 ARAP1Q96P48 1450 aa15□□□□□ -0.01
EIF3F-206ENST00000531572 TOPBP1Q92547 1522 aa14.98□□□□□ -0.01
EIF3F-206ENST00000531572 PRDM2Q13029 1718 aa14.97□□□□□ -0.01
EIF3F-206ENST00000531572 EIF4G3O43432 1585 aaKnown RBP14.94□□□□□ -0.02
EIF3F-206ENST00000531572 AQRO60306 1485 aaKnown RBP eCLIP14.89□□□□□ -0.032e-6■■■■■ 31.6
EIF3F-206ENST00000531572 DNMBPQ6XZF7 1577 aa14.89□□□□□ -0.03
EIF3F-206ENST00000531572 CCDC88BA6NC98 1476 aa14.88□□□□□ -0.03
EIF3F-206ENST00000531572 TARBP1Q13395 1621 aaKnown RBP14.88□□□□□ -0.03
EIF3F-206ENST00000531572 CHD1O14646 1710 aa14.87□□□□□ -0.03
EIF3F-206ENST00000531572 FBLN2P98095 1184 aa14.85□□□□□ -0.03
EIF3F-206ENST00000531572 POLA1P09884 1462 aaPredicted RBP14.8□□□□□ -0.04
EIF3F-206ENST00000531572 CLASP1Q7Z460 1538 aa14.8□□□□□ -0.04
EIF3F-206ENST00000531572 WDR97A6NE52 1622 aa14.8□□□□□ -0.04
EIF3F-206ENST00000531572 SOGA1O94964 1423 aa14.75□□□□□ -0.05
EIF3F-206ENST00000531572 CHMP7Q8WUX9 453 aaPredicted RBP14.75□□□□□ -0.05
EIF3F-206ENST00000531572 SYNJ1O43426 1573 aa14.75□□□□□ -0.05
EIF3F-206ENST00000531572 MAGI1Q96QZ7 1491 aaPredicted RBP14.75□□□□□ -0.05
EIF3F-206ENST00000531572 TDRD9Q8NDG6 1382 aaKnown RBP14.73□□□□□ -0.05
EIF3F-206ENST00000531572 SNAPC4Q5SXM2 1469 aa14.71□□□□□ -0.05
EIF3F-206ENST00000531572 RAD54L2Q9Y4B4 1467 aa14.7□□□□□ -0.06
EIF3F-206ENST00000531572 SYNJ2O15056 1496 aa14.69□□□□□ -0.06
EIF3F-206ENST00000531572 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
EIF3F-206ENST00000531572 GAPVD1Q14C86 1478 aa14.68□□□□□ -0.06
EIF3F-206ENST00000531572 FGD5Q6ZNL6 1462 aa14.62□□□□□ -0.07
EIF3F-206ENST00000531572 CUX1P39880 1505 aa14.53□□□□□ -0.08
EIF3F-206ENST00000531572 ABCA10Q8WWZ4 1543 aa14.5□□□□□ -0.09
EIF3F-206ENST00000531572 NUP160Q12769 1436 aa14.49□□□□□ -0.09
EIF3F-206ENST00000531572 PBRM1Q86U86 1689 aa14.47□□□□□ -0.09
EIF3F-206ENST00000531572 GRIN2AQ12879 1464 aa14.47□□□□□ -0.09
EIF3F-206ENST00000531572 ABCA5Q8WWZ7 1642 aa14.45□□□□□ -0.1
EIF3F-206ENST00000531572 CEP170Q5SW79 1584 aa14.45□□□□□ -0.1
EIF3F-206ENST00000531572 ERCC6L2Q5T890 1561 aa14.44□□□□□ -0.1
EIF3F-206ENST00000531572 SHROOM2Q13796 1616 aa14.43□□□□□ -0.1
EIF3F-206ENST00000531572 KIF13AQ9H1H9 1805 aa14.41□□□□□ -0.1
EIF3F-206ENST00000531572 ABCC10Q5T3U5 1492 aa14.39□□□□□ -0.11
EIF3F-206ENST00000531572 FHAD1B1AJZ9 1412 aa14.39□□□□□ -0.11
EIF3F-206ENST00000531572 ADAMTS12P58397 1594 aa14.36□□□□□ -0.11
EIF3F-206ENST00000531572 WRNQ14191 1432 aaPredicted RBP eCLIP14.36□□□□□ -0.11
EIF3F-206ENST00000531572 KDM4FA0A1W2PPD8 638 aa14.36□□□□□ -0.11
EIF3F-206ENST00000531572 FAM69CQ0P6D2 419 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms