RNA–Protein interactions for RNA: ENST00000531478.5

ABCA7-215, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 3

Gene ABCA7, Length 725 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-215ENST00000531478 NISCHQ9Y2I1 1504 aa48.62■■■■■ 5.37
ABCA7-215ENST00000531478 CCDC180Q9P1Z9 1646 aa43.45■■■■■ 4.55
ABCA7-215ENST00000531478 ABCC9O60706 1549 aa42.9■■■■■ 4.46
ABCA7-215ENST00000531478 RB1CC1Q8TDY2 1594 aa41.12■■■■■ 4.17
ABCA7-215ENST00000531478 DCAF8L2P0C7V8 631 aa40.98■■■■■ 4.15
ABCA7-215ENST00000531478 NACADO15069 1562 aa40.94■■■■■ 4.14
ABCA7-215ENST00000531478 MYO15BQ96JP2 1530 aa40.48■■■■■ 4.07
ABCA7-215ENST00000531478 ZCCHC6Q5VYS8 1495 aaKnown RBP40.39■■■■■ 4.06
ABCA7-215ENST00000531478 DCAF1Q9Y4B6 1507 aa40.17■■■■■ 4.02
ABCA7-215ENST00000531478 UNC13AQ9UPW8 1703 aa40.16■■■■■ 4.02
ABCA7-215ENST00000531478 PABPN1Q86U42 306 aaKnown RBP eCLIP40.02■■■■■ 41e-7■■■■■ 27.5
ABCA7-215ENST00000531478 BICRAQ9NZM4 1560 aa39.76■■■■□ 3.96
ABCA7-215ENST00000531478 SCRIBQ14160 1630 aa39.63■■■■□ 3.93
ABCA7-215ENST00000531478 DNAJC5BQ9UF47 199 aa39.63■■■■□ 3.93
ABCA7-215ENST00000531478 SHROOM4Q9ULL8 1493 aa39.36■■■■□ 3.89
ABCA7-215ENST00000531478 EIF4G1Q04637 1599 aaKnown RBP38.81■■■■□ 3.8
ABCA7-215ENST00000531478 CC2D2AQ9P2K1 1620 aa38.78■■■■□ 3.8
ABCA7-215ENST00000531478 CECR2Q9BXF3 1484 aa38.58■■■■□ 3.77
ABCA7-215ENST00000531478 SMARCA4P51532 1647 aa37.83■■■■□ 3.65
ABCA7-215ENST00000531478 BAZ1AQ9NRL2 1556 aaPredicted RBP37.76■■■■□ 3.63
ABCA7-215ENST00000531478 NCAPD3P42695 1498 aa37.72■■■■□ 3.63
ABCA7-215ENST00000531478 SMARCA2P51531 1590 aa37.7■■■■□ 3.63
ABCA7-215ENST00000531478 ATAD2BQ9ULI0 1458 aa37.69■■■■□ 3.62
ABCA7-215ENST00000531478 HMGXB3Q12766 1538 aa37.53■■■■□ 3.6
ABCA7-215ENST00000531478 MROH2BQ7Z745 1585 aa37.45■■■■□ 3.59
ABCA7-215ENST00000531478 BAZ1BQ9UIG0 1483 aaKnown RBP37.44■■■■□ 3.58
ABCA7-215ENST00000531478 PEG3Q9GZU2 1588 aa37.41■■■■□ 3.58
ABCA7-215ENST00000531478 WIZO95785 1651 aa37.09■■■■□ 3.53
ABCA7-215ENST00000531478 ERCC6Q03468 1493 aa37.07■■■■□ 3.53
ABCA7-215ENST00000531478 NESP48681 1621 aa36.96■■■■□ 3.51
ABCA7-215ENST00000531478 RSF1Q96T23 1441 aaPredicted RBP36.94■■■■□ 3.5
ABCA7-215ENST00000531478 LAMC3Q9Y6N6 1575 aa36.86■■■■□ 3.49
ABCA7-215ENST00000531478 CUX2O14529 1486 aa36.75■■■■□ 3.47
ABCA7-215ENST00000531478 PDS5BQ9NTI5 1447 aa36.65■■■■□ 3.46
ABCA7-215ENST00000531478 TOP2AP11388 1531 aaKnown RBP36.64■■■■□ 3.46
ABCA7-215ENST00000531478 CADPSQ9ULU8 1353 aa36.64■■■■□ 3.46
ABCA7-215ENST00000531478 KIF21AQ7Z4S6 1674 aa36.58■■■■□ 3.45
ABCA7-215ENST00000531478 THOC2Q8NI27 1593 aaKnown RBP36.48■■■■□ 3.43
ABCA7-215ENST00000531478 CFTRP13569 1480 aa36.31■■■■□ 3.4
ABCA7-215ENST00000531478 SUPT5HO00267 1087 aaKnown RBP36.27■■■■□ 3.4
ABCA7-215ENST00000531478 MRC2Q9UBG0 1479 aa36.26■■■■□ 3.4
ABCA7-215ENST00000531478 CEP164Q9UPV0 1460 aa36.26■■■■□ 3.4
ABCA7-215ENST00000531478 FANCD2Q9BXW9 1451 aa36.24■■■■□ 3.39
ABCA7-215ENST00000531478 CCDC88BA6NC98 1476 aa36.2■■■■□ 3.39
ABCA7-215ENST00000531478 PRDM2Q13029 1718 aa36.13■■■■□ 3.37
ABCA7-215ENST00000531478 WDR62O43379 1518 aa36.12■■■■□ 3.37
ABCA7-215ENST00000531478 DNAJC5Q9H3Z4 198 aa36.07■■■■□ 3.36
ABCA7-215ENST00000531478 URB2Q14146 1524 aaKnown RBP35.86■■■■□ 3.33
ABCA7-215ENST00000531478 ABCC8Q09428 1581 aa35.64■■■■□ 3.3
ABCA7-215ENST00000531478 TOPBP1Q92547 1522 aa35.6■■■■□ 3.29
ABCA7-215ENST00000531478 DNMBPQ6XZF7 1577 aa35.55■■■■□ 3.28
ABCA7-215ENST00000531478 IFT140Q96RY7 1462 aa35.48■■■■□ 3.27
ABCA7-215ENST00000531478 ZNF608Q9ULD9 1512 aaPredicted RBP35.32■■■■□ 3.24
ABCA7-215ENST00000531478 POLA1P09884 1462 aaPredicted RBP35.25■■■■□ 3.23
ABCA7-215ENST00000531478 TARBP1Q13395 1621 aaKnown RBP35.22■■■■□ 3.23
ABCA7-215ENST00000531478 OSCARQ8IYS5 282 aa35.22■■■■□ 3.23
ABCA7-215ENST00000531478 EIF4G3O43432 1585 aaKnown RBP35.21■■■■□ 3.23
ABCA7-215ENST00000531478 CUX1P39880 1505 aa35.16■■■■□ 3.22
ABCA7-215ENST00000531478 SOGA1O94964 1423 aa35.16■■■■□ 3.22
ABCA7-215ENST00000531478 FGD5Q6ZNL6 1462 aa35.15■■■■□ 3.22
ABCA7-215ENST00000531478 RAD54L2Q9Y4B4 1467 aa35.12■■■■□ 3.21
ABCA7-215ENST00000531478 AQRO60306 1485 aaKnown RBP eCLIP35.11■■■■□ 3.214e-8■■■■■ 33.1
ABCA7-215ENST00000531478 TDRD9Q8NDG6 1382 aaKnown RBP35■■■■□ 3.19
ABCA7-215ENST00000531478 WDR97A6NE52 1622 aa34.95■■■■□ 3.19
ABCA7-215ENST00000531478 FBLN2P98095 1184 aa34.9■■■■□ 3.18
ABCA7-215ENST00000531478 CHD1O14646 1710 aa34.89■■■■□ 3.18
ABCA7-215ENST00000531478 WRNQ14191 1432 aaPredicted RBP eCLIP34.84■■■■□ 3.17
ABCA7-215ENST00000531478 TRIM41Q8WV44 630 aa34.84■■■■□ 3.17
ABCA7-215ENST00000531478 TOP2BQ02880 1626 aa34.79■■■■□ 3.16
ABCA7-215ENST00000531478 BIVM-ERCC5R4GMW8 1640 aa34.79■■■■□ 3.16
ABCA7-215ENST00000531478 GRIN2BQ13224 1484 aa34.78■■■■□ 3.16
ABCA7-215ENST00000531478 SNAPC4Q5SXM2 1469 aa34.78■■■■□ 3.16
ABCA7-215ENST00000531478 ABCA10Q8WWZ4 1543 aa34.76■■■■□ 3.15
ABCA7-215ENST00000531478 GAPVD1Q14C86 1478 aa34.74■■■■□ 3.15
ABCA7-215ENST00000531478 SYNJ1O43426 1573 aa34.74■■■■□ 3.15
ABCA7-215ENST00000531478 PBRM1Q86U86 1689 aa34.73■■■■□ 3.15
ABCA7-215ENST00000531478 MAGI1Q96QZ7 1491 aaPredicted RBP34.73■■■■□ 3.15
ABCA7-215ENST00000531478 CHMP7Q8WUX9 453 aaPredicted RBP34.7■■■■□ 3.15
ABCA7-215ENST00000531478 RIMBP3CA6NJZ7 1639 aa34.65■■■■□ 3.14
ABCA7-215ENST00000531478 RIMBP3BA6NNM3 1639 aa34.65■■■■□ 3.14
ABCA7-215ENST00000531478 ABCA5Q8WWZ7 1642 aa34.65■■■■□ 3.14
ABCA7-215ENST00000531478 RIMBP3Q9UFD9 1639 aa34.65■■■■□ 3.14
ABCA7-215ENST00000531478 SYNJ2O15056 1496 aa34.59■■■■□ 3.13
ABCA7-215ENST00000531478 ARHGEF11O15085 1522 aa34.57■■■■□ 3.12
ABCA7-215ENST00000531478 CLASP1Q7Z460 1538 aa34.4■■■■□ 3.1
ABCA7-215ENST00000531478 ADAMTS12P58397 1594 aa34.36■■■■□ 3.09
ABCA7-215ENST00000531478 ERICH3Q5RHP9 1530 aa34.36■■■■□ 3.09
ABCA7-215ENST00000531478 CYB5RLQ6IPT4 315 aa34.35■■■■□ 3.09
ABCA7-215ENST00000531478 GRIN2AQ12879 1464 aa34.33■■■■□ 3.09
ABCA7-215ENST00000531478 FHAD1B1AJZ9 1412 aa34.3■■■■□ 3.08
ABCA7-215ENST00000531478 ARAP1Q96P48 1450 aa34.24■■■■□ 3.07
ABCA7-215ENST00000531478 KIF27Q86VH2 1401 aa34.17■■■■□ 3.06
ABCA7-215ENST00000531478 CEP170Q5SW79 1584 aa34.15■■■■□ 3.06
ABCA7-215ENST00000531478 NUP160Q12769 1436 aa34.13■■■■□ 3.05
ABCA7-215ENST00000531478 CUL7Q14999 1698 aa34.03■■■■□ 3.04
ABCA7-215ENST00000531478 IGF1RP08069 1367 aa34■■■■□ 3.03
ABCA7-215ENST00000531478 SHROOM2Q13796 1616 aa33.95■■■■□ 3.03
ABCA7-215ENST00000531478 CHIC1Q5VXU3 224 aa33.91■■■■□ 3.02
ABCA7-215ENST00000531478 ERCC6L2Q5T890 1561 aa33.9■■■■□ 3.02
ABCA7-215ENST00000531478 RUSC2Q8N2Y8 1516 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms