RNA–Protein interactions for RNA: ENST00000531318.1

NFRKB-208, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 4

Gene NFRKB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-208ENST00000531318 NISCHQ9Y2I1 1504 aa18.67■□□□□ 0.58
NFRKB-208ENST00000531318 AEBP2Q6ZN18 517 aaPredicted RBP17.36■□□□□ 0.37
NFRKB-208ENST00000531318 ABCC9O60706 1549 aa17.09■□□□□ 0.33
NFRKB-208ENST00000531318 CCDC180Q9P1Z9 1646 aa16.87■□□□□ 0.29
NFRKB-208ENST00000531318 CHIC1Q5VXU3 224 aa16.65■□□□□ 0.26
NFRKB-208ENST00000531318 RB1CC1Q8TDY2 1594 aa16.14■□□□□ 0.17
NFRKB-208ENST00000531318 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.17
NFRKB-208ENST00000531318 DCAF8L2P0C7V8 631 aa15.97■□□□□ 0.15
NFRKB-208ENST00000531318 NACADO15069 1562 aa15.95■□□□□ 0.14
NFRKB-208ENST00000531318 UNC13AQ9UPW8 1703 aa15.9■□□□□ 0.14
NFRKB-208ENST00000531318 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.13
NFRKB-208ENST00000531318 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
NFRKB-208ENST00000531318 MYO15BQ96JP2 1530 aa15.58■□□□□ 0.09
NFRKB-208ENST00000531318 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
NFRKB-208ENST00000531318 ZCCHC6Q5VYS8 1495 aaKnown RBP15.42■□□□□ 0.06
NFRKB-208ENST00000531318 CC2D2AQ9P2K1 1620 aa15.42■□□□□ 0.06
NFRKB-208ENST00000531318 CECR2Q9BXF3 1484 aa15.38■□□□□ 0.05
NFRKB-208ENST00000531318 SHROOM4Q9ULL8 1493 aa15.34■□□□□ 0.05
NFRKB-208ENST00000531318 DCAF1Q9Y4B6 1507 aa15.34■□□□□ 0.05
NFRKB-208ENST00000531318 EIF4G1Q04637 1599 aaKnown RBP15.32■□□□□ 0.04
NFRKB-208ENST00000531318 DNAJC5Q9H3Z4 198 aa14.92□□□□□ -0.02
NFRKB-208ENST00000531318 ERCC6Q03468 1493 aa14.77□□□□□ -0.04
NFRKB-208ENST00000531318 CUX2O14529 1486 aa14.73□□□□□ -0.05
NFRKB-208ENST00000531318 SENP3Q9H4L4 574 aaPredicted RBP14.7□□□□□ -0.06
NFRKB-208ENST00000531318 NCAPD3P42695 1498 aa14.69□□□□□ -0.06
NFRKB-208ENST00000531318 PHF23Q9BUL5 403 aaPredicted RBP14.67□□□□□ -0.06
NFRKB-208ENST00000531318 ATAD2BQ9ULI0 1458 aa14.66□□□□□ -0.06
NFRKB-208ENST00000531318 SMARCA4P51532 1647 aa14.65□□□□□ -0.06
NFRKB-208ENST00000531318 NESP48681 1621 aa14.63□□□□□ -0.07
NFRKB-208ENST00000531318 SMARCA2P51531 1590 aa14.62□□□□□ -0.07
NFRKB-208ENST00000531318 HMGXB3Q12766 1538 aa14.6□□□□□ -0.07
NFRKB-208ENST00000531318 BAZ1BQ9UIG0 1483 aaKnown RBP14.55□□□□□ -0.08
NFRKB-208ENST00000531318 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
NFRKB-208ENST00000531318 THOC2Q8NI27 1593 aaKnown RBP14.5□□□□□ -0.09
NFRKB-208ENST00000531318 KIF21AQ7Z4S6 1674 aa14.49□□□□□ -0.09
NFRKB-208ENST00000531318 LAMC3Q9Y6N6 1575 aa14.45□□□□□ -0.1
NFRKB-208ENST00000531318 PEG3Q9GZU2 1588 aa14.43□□□□□ -0.1
NFRKB-208ENST00000531318 MROH2BQ7Z745 1585 aa14.41□□□□□ -0.1
NFRKB-208ENST00000531318 PDS5BQ9NTI5 1447 aa14.35□□□□□ -0.11
NFRKB-208ENST00000531318 TRIM41Q8WV44 630 aa14.33□□□□□ -0.12
NFRKB-208ENST00000531318 WIZO95785 1651 aa14.3□□□□□ -0.12
NFRKB-208ENST00000531318 MRC2Q9UBG0 1479 aa14.26□□□□□ -0.13
NFRKB-208ENST00000531318 CADPSQ9ULU8 1353 aa14.26□□□□□ -0.13
NFRKB-208ENST00000531318 WDR62O43379 1518 aa14.21□□□□□ -0.13
NFRKB-208ENST00000531318 CEP164Q9UPV0 1460 aa14.18□□□□□ -0.14
NFRKB-208ENST00000531318 FANCD2Q9BXW9 1451 aa14.14□□□□□ -0.15
NFRKB-208ENST00000531318 PRDM2Q13029 1718 aa14.05□□□□□ -0.16
NFRKB-208ENST00000531318 OSCARQ8IYS5 282 aa14.05□□□□□ -0.16
NFRKB-208ENST00000531318 CFTRP13569 1480 aa14.05□□□□□ -0.16
NFRKB-208ENST00000531318 URB2Q14146 1524 aaKnown RBP14.04□□□□□ -0.16
NFRKB-208ENST00000531318 TOP2AP11388 1531 aaKnown RBP14.03□□□□□ -0.16
NFRKB-208ENST00000531318 RSF1Q96T23 1441 aaPredicted RBP14.01□□□□□ -0.17
NFRKB-208ENST00000531318 RIMBP3CA6NJZ7 1639 aa13.95□□□□□ -0.18
NFRKB-208ENST00000531318 RIMBP3BA6NNM3 1639 aa13.95□□□□□ -0.18
NFRKB-208ENST00000531318 RIMBP3Q9UFD9 1639 aa13.95□□□□□ -0.18
NFRKB-208ENST00000531318 ZNF608Q9ULD9 1512 aaPredicted RBP13.9□□□□□ -0.18
NFRKB-208ENST00000531318 CCDC88BA6NC98 1476 aa13.87□□□□□ -0.19
NFRKB-208ENST00000531318 IFT140Q96RY7 1462 aa13.87□□□□□ -0.19
NFRKB-208ENST00000531318 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
NFRKB-208ENST00000531318 CHD1O14646 1710 aa13.85□□□□□ -0.19
NFRKB-208ENST00000531318 EIF4G3O43432 1585 aaKnown RBP13.85□□□□□ -0.19
NFRKB-208ENST00000531318 ARHGEF11O15085 1522 aa13.85□□□□□ -0.19
NFRKB-208ENST00000531318 DNMBPQ6XZF7 1577 aa13.79□□□□□ -0.2
NFRKB-208ENST00000531318 CYB5RLQ6IPT4 315 aa13.78□□□□□ -0.2
NFRKB-208ENST00000531318 FBLN2P98095 1184 aa13.77□□□□□ -0.21
NFRKB-208ENST00000531318 ABCC8Q09428 1581 aa13.77□□□□□ -0.21
NFRKB-208ENST00000531318 AQRO60306 1485 aaKnown RBP eCLIP13.76□□□□□ -0.212e-10■■■■□ 22.5
NFRKB-208ENST00000531318 TARBP1Q13395 1621 aaKnown RBP13.75□□□□□ -0.21
NFRKB-208ENST00000531318 TRHP20396 242 aaPredicted RBP13.73□□□□□ -0.21
NFRKB-208ENST00000531318 FOXD1Q16676 465 aa13.73□□□□□ -0.21
NFRKB-208ENST00000531318 POLA1P09884 1462 aaPredicted RBP13.69□□□□□ -0.22
NFRKB-208ENST00000531318 ARAP1Q96P48 1450 aa13.69□□□□□ -0.22
NFRKB-208ENST00000531318 RAD54L2Q9Y4B4 1467 aa13.68□□□□□ -0.22
NFRKB-208ENST00000531318 TDRD9Q8NDG6 1382 aaKnown RBP13.65□□□□□ -0.22
NFRKB-208ENST00000531318 SOGA1O94964 1423 aa13.64□□□□□ -0.23
NFRKB-208ENST00000531318 SNAPC4Q5SXM2 1469 aa13.62□□□□□ -0.23
NFRKB-208ENST00000531318 FGD5Q6ZNL6 1462 aa13.61□□□□□ -0.23
NFRKB-208ENST00000531318 CHMP7Q8WUX9 453 aaPredicted RBP13.58□□□□□ -0.24
NFRKB-208ENST00000531318 SYNJ1O43426 1573 aa13.58□□□□□ -0.24
NFRKB-208ENST00000531318 CLASP1Q7Z460 1538 aa13.57□□□□□ -0.24
NFRKB-208ENST00000531318 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
NFRKB-208ENST00000531318 CUX1P39880 1505 aa13.55□□□□□ -0.24
NFRKB-208ENST00000531318 WDR97A6NE52 1622 aa13.55□□□□□ -0.24
NFRKB-208ENST00000531318 MAGI1Q96QZ7 1491 aaPredicted RBP13.54□□□□□ -0.24
NFRKB-208ENST00000531318 GRIN2BQ13224 1484 aa13.52□□□□□ -0.25
NFRKB-208ENST00000531318 SYNJ2O15056 1496 aa13.49□□□□□ -0.25
NFRKB-208ENST00000531318 GAPVD1Q14C86 1478 aa13.47□□□□□ -0.25
NFRKB-208ENST00000531318 ABCA5Q8WWZ7 1642 aa13.42□□□□□ -0.26
NFRKB-208ENST00000531318 ERCC6L2Q5T890 1561 aa13.4□□□□□ -0.26
NFRKB-208ENST00000531318 ABCA10Q8WWZ4 1543 aa13.39□□□□□ -0.27
NFRKB-208ENST00000531318 PLPPR3Q6T4P5 718 aa13.38□□□□□ -0.27
NFRKB-208ENST00000531318 SUPT5HO00267 1087 aaKnown RBP13.37□□□□□ -0.27
NFRKB-208ENST00000531318 GRIN2AQ12879 1464 aa13.36□□□□□ -0.27
NFRKB-208ENST00000531318 ADAMTS12P58397 1594 aa13.35□□□□□ -0.27
NFRKB-208ENST00000531318 CEP170Q5SW79 1584 aa13.35□□□□□ -0.27
NFRKB-208ENST00000531318 WRNQ14191 1432 aaPredicted RBP eCLIP13.31□□□□□ -0.28
NFRKB-208ENST00000531318 KIF13AQ9H1H9 1805 aa13.31□□□□□ -0.28
NFRKB-208ENST00000531318 BIVM-ERCC5R4GMW8 1640 aa13.31□□□□□ -0.28
NFRKB-208ENST00000531318 TOP2BQ02880 1626 aa13.28□□□□□ -0.28
NFRKB-208ENST00000531318 NUP160Q12769 1436 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms