RNA–Protein interactions for RNA: ENST00000531293.1

SLN-203, Transcript of sarcolipin, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SLN, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLN-203ENST00000531293 NISCHQ9Y2I1 1504 aa24.62■■□□□ 1.53
SLN-203ENST00000531293 CCDC180Q9P1Z9 1646 aa22.08■■□□□ 1.13
SLN-203ENST00000531293 ABCC9O60706 1549 aa21.86■■□□□ 1.09
SLN-203ENST00000531293 RB1CC1Q8TDY2 1594 aa20.89■□□□□ 0.93
SLN-203ENST00000531293 NACADO15069 1562 aa20.79■□□□□ 0.92
SLN-203ENST00000531293 DCAF8L2P0C7V8 631 aa20.58■□□□□ 0.89
SLN-203ENST00000531293 MYO15BQ96JP2 1530 aa20.56■□□□□ 0.88
SLN-203ENST00000531293 UNC13AQ9UPW8 1703 aa20.53■□□□□ 0.88
SLN-203ENST00000531293 ZCCHC6Q5VYS8 1495 aaKnown RBP20.46■□□□□ 0.87
SLN-203ENST00000531293 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
SLN-203ENST00000531293 DCAF1Q9Y4B6 1507 aa20.36■□□□□ 0.85
SLN-203ENST00000531293 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
SLN-203ENST00000531293 PABPN1Q86U42 306 aaKnown RBP eCLIP20.33■□□□□ 0.85
SLN-203ENST00000531293 SCRIBQ14160 1630 aa20.1■□□□□ 0.81
SLN-203ENST00000531293 SHROOM4Q9ULL8 1493 aa20.02■□□□□ 0.8
SLN-203ENST00000531293 CC2D2AQ9P2K1 1620 aa19.8■□□□□ 0.76
SLN-203ENST00000531293 EIF4G1Q04637 1599 aaKnown RBP19.78■□□□□ 0.76
SLN-203ENST00000531293 CECR2Q9BXF3 1484 aa19.67■□□□□ 0.74
SLN-203ENST00000531293 SMARCA4P51532 1647 aa19.21■□□□□ 0.67
SLN-203ENST00000531293 NCAPD3P42695 1498 aa19.17■□□□□ 0.66
SLN-203ENST00000531293 ATAD2BQ9ULI0 1458 aa19.15■□□□□ 0.66
SLN-203ENST00000531293 SMARCA2P51531 1590 aa19.1■□□□□ 0.65
SLN-203ENST00000531293 BAZ1AQ9NRL2 1556 aaPredicted RBP19.1■□□□□ 0.65
SLN-203ENST00000531293 HMGXB3Q12766 1538 aa19.08■□□□□ 0.64
SLN-203ENST00000531293 PEG3Q9GZU2 1588 aa19.02■□□□□ 0.63
SLN-203ENST00000531293 MROH2BQ7Z745 1585 aa18.98■□□□□ 0.63
SLN-203ENST00000531293 BAZ1BQ9UIG0 1483 aaKnown RBP18.95■□□□□ 0.62
SLN-203ENST00000531293 NESP48681 1621 aa18.85■□□□□ 0.61
SLN-203ENST00000531293 ERCC6Q03468 1493 aa18.84■□□□□ 0.61
SLN-203ENST00000531293 WIZO95785 1651 aa18.79■□□□□ 0.6
SLN-203ENST00000531293 CUX2O14529 1486 aa18.77■□□□□ 0.6
SLN-203ENST00000531293 AEBP2Q6ZN18 517 aaPredicted RBP18.77■□□□□ 0.6
SLN-203ENST00000531293 LAMC3Q9Y6N6 1575 aa18.74■□□□□ 0.59
SLN-203ENST00000531293 THOC2Q8NI27 1593 aaKnown RBP18.68■□□□□ 0.58
SLN-203ENST00000531293 KIF21AQ7Z4S6 1674 aa18.66■□□□□ 0.58
SLN-203ENST00000531293 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
SLN-203ENST00000531293 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
SLN-203ENST00000531293 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
SLN-203ENST00000531293 DNAJC5Q9H3Z4 198 aa18.55■□□□□ 0.56
SLN-203ENST00000531293 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
SLN-203ENST00000531293 MRC2Q9UBG0 1479 aa18.44■□□□□ 0.54
SLN-203ENST00000531293 WDR62O43379 1518 aa18.43■□□□□ 0.54
SLN-203ENST00000531293 CFTRP13569 1480 aa18.42■□□□□ 0.54
SLN-203ENST00000531293 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.54
SLN-203ENST00000531293 FANCD2Q9BXW9 1451 aa18.38■□□□□ 0.53
SLN-203ENST00000531293 PRDM2Q13029 1718 aa18.36■□□□□ 0.53
SLN-203ENST00000531293 CCDC88BA6NC98 1476 aa18.31■□□□□ 0.52
SLN-203ENST00000531293 URB2Q14146 1524 aaKnown RBP18.25■□□□□ 0.51
SLN-203ENST00000531293 TOPBP1Q92547 1522 aa18.08■□□□□ 0.48
SLN-203ENST00000531293 DNMBPQ6XZF7 1577 aa18.03■□□□□ 0.48
SLN-203ENST00000531293 IFT140Q96RY7 1462 aa18.01■□□□□ 0.47
SLN-203ENST00000531293 ABCC8Q09428 1581 aa18■□□□□ 0.47
SLN-203ENST00000531293 ZNF608Q9ULD9 1512 aaPredicted RBP17.99■□□□□ 0.47
SLN-203ENST00000531293 SUPT5HO00267 1087 aaKnown RBP17.97■□□□□ 0.47
SLN-203ENST00000531293 EIF4G3O43432 1585 aaKnown RBP17.94■□□□□ 0.46
SLN-203ENST00000531293 TARBP1Q13395 1621 aaKnown RBP17.94■□□□□ 0.46
SLN-203ENST00000531293 POLA1P09884 1462 aaPredicted RBP17.9■□□□□ 0.46
SLN-203ENST00000531293 OSCARQ8IYS5 282 aa17.87■□□□□ 0.45
SLN-203ENST00000531293 CUX1P39880 1505 aa17.83■□□□□ 0.45
SLN-203ENST00000531293 AQRO60306 1485 aaKnown RBP eCLIP17.82■□□□□ 0.44
SLN-203ENST00000531293 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
SLN-203ENST00000531293 FGD5Q6ZNL6 1462 aa17.81■□□□□ 0.44
SLN-203ENST00000531293 CHD1O14646 1710 aa17.8■□□□□ 0.44
SLN-203ENST00000531293 TRIM41Q8WV44 630 aa17.77■□□□□ 0.44
SLN-203ENST00000531293 SOGA1O94964 1423 aa17.77■□□□□ 0.44
SLN-203ENST00000531293 WDR97A6NE52 1622 aa17.76■□□□□ 0.43
SLN-203ENST00000531293 RIMBP3CA6NJZ7 1639 aa17.74■□□□□ 0.43
SLN-203ENST00000531293 RIMBP3BA6NNM3 1639 aa17.74■□□□□ 0.43
SLN-203ENST00000531293 RIMBP3Q9UFD9 1639 aa17.74■□□□□ 0.43
SLN-203ENST00000531293 TDRD9Q8NDG6 1382 aaKnown RBP17.72■□□□□ 0.43
SLN-203ENST00000531293 ARHGEF11O15085 1522 aa17.67■□□□□ 0.42
SLN-203ENST00000531293 SNAPC4Q5SXM2 1469 aa17.67■□□□□ 0.42
SLN-203ENST00000531293 PBRM1Q86U86 1689 aa17.65■□□□□ 0.42
SLN-203ENST00000531293 ABCA5Q8WWZ7 1642 aa17.62■□□□□ 0.41
SLN-203ENST00000531293 GRIN2BQ13224 1484 aa17.62■□□□□ 0.41
SLN-203ENST00000531293 MAGI1Q96QZ7 1491 aaPredicted RBP17.62■□□□□ 0.41
SLN-203ENST00000531293 BIVM-ERCC5R4GMW8 1640 aa17.61■□□□□ 0.41
SLN-203ENST00000531293 ABCA10Q8WWZ4 1543 aa17.61■□□□□ 0.41
SLN-203ENST00000531293 FBLN2P98095 1184 aa17.6■□□□□ 0.41
SLN-203ENST00000531293 TOP2BQ02880 1626 aa17.59■□□□□ 0.41
SLN-203ENST00000531293 SYNJ1O43426 1573 aa17.59■□□□□ 0.41
SLN-203ENST00000531293 CLASP1Q7Z460 1538 aa17.57■□□□□ 0.4
SLN-203ENST00000531293 GAPVD1Q14C86 1478 aa17.57■□□□□ 0.4
SLN-203ENST00000531293 SYNJ2O15056 1496 aa17.56■□□□□ 0.4
SLN-203ENST00000531293 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
SLN-203ENST00000531293 ARAP1Q96P48 1450 aa17.52■□□□□ 0.4
SLN-203ENST00000531293 CHIC1Q5VXU3 224 aa17.51■□□□□ 0.39
SLN-203ENST00000531293 CHMP7Q8WUX9 453 aaPredicted RBP17.5■□□□□ 0.39
SLN-203ENST00000531293 ADAMTS12P58397 1594 aa17.46■□□□□ 0.39
SLN-203ENST00000531293 CYB5RLQ6IPT4 315 aa17.45■□□□□ 0.38
SLN-203ENST00000531293 GRIN2AQ12879 1464 aa17.41■□□□□ 0.38
SLN-203ENST00000531293 ERICH3Q5RHP9 1530 aa17.39■□□□□ 0.37
SLN-203ENST00000531293 CEP170Q5SW79 1584 aa17.38■□□□□ 0.37
SLN-203ENST00000531293 FHAD1B1AJZ9 1412 aa17.35■□□□□ 0.37
SLN-203ENST00000531293 NUP160Q12769 1436 aa17.35■□□□□ 0.37
SLN-203ENST00000531293 ERCC6L2Q5T890 1561 aa17.32■□□□□ 0.36
SLN-203ENST00000531293 SHROOM2Q13796 1616 aa17.31■□□□□ 0.36
SLN-203ENST00000531293 RUSC2Q8N2Y8 1516 aa17.22■□□□□ 0.35
SLN-203ENST00000531293 CUL7Q14999 1698 aa17.2■□□□□ 0.34
SLN-203ENST00000531293 TRHP20396 242 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms