RNA–Protein interactions for RNA: ENST00000531168.1

MMP8-204, Transcript of matrix metallopeptidase 8, humanhuman

TSL 3

Gene MMP8, Length 528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8-204ENST00000531168 NISCHQ9Y2I1 1504 aa22.52■■□□□ 1.2
MMP8-204ENST00000531168 CCDC180Q9P1Z9 1646 aa20.2■□□□□ 0.82
MMP8-204ENST00000531168 ABCC9O60706 1549 aa19.54■□□□□ 0.72
MMP8-204ENST00000531168 RB1CC1Q8TDY2 1594 aa18.89■□□□□ 0.61
MMP8-204ENST00000531168 NACADO15069 1562 aa18.86■□□□□ 0.61
MMP8-204ENST00000531168 ZCCHC6Q5VYS8 1495 aaKnown RBP18.82■□□□□ 0.6
MMP8-204ENST00000531168 MYO15BQ96JP2 1530 aa18.79■□□□□ 0.6
MMP8-204ENST00000531168 DCAF1Q9Y4B6 1507 aa18.7■□□□□ 0.58
MMP8-204ENST00000531168 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
MMP8-204ENST00000531168 DCAF8L2P0C7V8 631 aa18.46■□□□□ 0.55
MMP8-204ENST00000531168 BICRAQ9NZM4 1560 aa18.4■□□□□ 0.54
MMP8-204ENST00000531168 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
MMP8-204ENST00000531168 SHROOM4Q9ULL8 1493 aa18.17■□□□□ 0.5
MMP8-204ENST00000531168 PABPN1Q86U42 306 aaKnown RBP eCLIP18.11■□□□□ 0.49
MMP8-204ENST00000531168 DNAJC5BQ9UF47 199 aa17.88■□□□□ 0.45
MMP8-204ENST00000531168 EIF4G1Q04637 1599 aaKnown RBP17.85■□□□□ 0.45
MMP8-204ENST00000531168 CC2D2AQ9P2K1 1620 aa17.79■□□□□ 0.44
MMP8-204ENST00000531168 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
MMP8-204ENST00000531168 SMARCA4P51532 1647 aa17.55■□□□□ 0.4
MMP8-204ENST00000531168 BAZ1AQ9NRL2 1556 aaPredicted RBP17.47■□□□□ 0.39
MMP8-204ENST00000531168 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
MMP8-204ENST00000531168 SMARCA2P51531 1590 aa17.37■□□□□ 0.37
MMP8-204ENST00000531168 ATAD2BQ9ULI0 1458 aa17.37■□□□□ 0.37
MMP8-204ENST00000531168 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
MMP8-204ENST00000531168 MROH2BQ7Z745 1585 aa17.36■□□□□ 0.37
MMP8-204ENST00000531168 NCAPD3P42695 1498 aa17.35■□□□□ 0.37
MMP8-204ENST00000531168 WIZO95785 1651 aa17.23■□□□□ 0.35
MMP8-204ENST00000531168 BAZ1BQ9UIG0 1483 aaKnown RBP17.2■□□□□ 0.34
MMP8-204ENST00000531168 RSF1Q96T23 1441 aaPredicted RBP17.09■□□□□ 0.33
MMP8-204ENST00000531168 TOP2AP11388 1531 aaKnown RBP17.03■□□□□ 0.32
MMP8-204ENST00000531168 LAMC3Q9Y6N6 1575 aa16.97■□□□□ 0.31
MMP8-204ENST00000531168 NESP48681 1621 aa16.95■□□□□ 0.3
MMP8-204ENST00000531168 KIF21AQ7Z4S6 1674 aa16.91■□□□□ 0.3
MMP8-204ENST00000531168 PRDM2Q13029 1718 aa16.9■□□□□ 0.3
MMP8-204ENST00000531168 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
MMP8-204ENST00000531168 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
MMP8-204ENST00000531168 CADPSQ9ULU8 1353 aa16.77■□□□□ 0.28
MMP8-204ENST00000531168 CFTRP13569 1480 aa16.75■□□□□ 0.27
MMP8-204ENST00000531168 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
MMP8-204ENST00000531168 CUX2O14529 1486 aa16.73■□□□□ 0.27
MMP8-204ENST00000531168 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
MMP8-204ENST00000531168 WDR62O43379 1518 aa16.65■□□□□ 0.26
MMP8-204ENST00000531168 FANCD2Q9BXW9 1451 aa16.63■□□□□ 0.25
MMP8-204ENST00000531168 CEP164Q9UPV0 1460 aa16.63■□□□□ 0.25
MMP8-204ENST00000531168 MRC2Q9UBG0 1479 aa16.62■□□□□ 0.25
MMP8-204ENST00000531168 URB2Q14146 1524 aaKnown RBP16.53■□□□□ 0.24
MMP8-204ENST00000531168 DNMBPQ6XZF7 1577 aa16.43■□□□□ 0.22
MMP8-204ENST00000531168 SUPT5HO00267 1087 aaKnown RBP16.43■□□□□ 0.22
MMP8-204ENST00000531168 TOPBP1Q92547 1522 aa16.41■□□□□ 0.22
MMP8-204ENST00000531168 ABCC8Q09428 1581 aa16.35■□□□□ 0.21
MMP8-204ENST00000531168 TARBP1Q13395 1621 aaKnown RBP16.32■□□□□ 0.2
MMP8-204ENST00000531168 CUX1P39880 1505 aa16.3■□□□□ 0.2
MMP8-204ENST00000531168 WDR97A6NE52 1622 aa16.3■□□□□ 0.2
MMP8-204ENST00000531168 IFT140Q96RY7 1462 aa16.28■□□□□ 0.2
MMP8-204ENST00000531168 BIVM-ERCC5R4GMW8 1640 aa16.27■□□□□ 0.19
MMP8-204ENST00000531168 EIF4G3O43432 1585 aaKnown RBP16.26■□□□□ 0.19
MMP8-204ENST00000531168 POLA1P09884 1462 aaPredicted RBP16.26■□□□□ 0.19
MMP8-204ENST00000531168 ZNF608Q9ULD9 1512 aaPredicted RBP16.22■□□□□ 0.19
MMP8-204ENST00000531168 FGD5Q6ZNL6 1462 aa16.22■□□□□ 0.19
MMP8-204ENST00000531168 TOP2BQ02880 1626 aa16.19■□□□□ 0.18
MMP8-204ENST00000531168 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
MMP8-204ENST00000531168 RAD54L2Q9Y4B4 1467 aa16.14■□□□□ 0.17
MMP8-204ENST00000531168 PBRM1Q86U86 1689 aa16.14■□□□□ 0.17
MMP8-204ENST00000531168 ABCA5Q8WWZ7 1642 aa16.12■□□□□ 0.17
MMP8-204ENST00000531168 CHD1O14646 1710 aa16.11■□□□□ 0.17
MMP8-204ENST00000531168 WRNQ14191 1432 aaPredicted RBP eCLIP16.1■□□□□ 0.17
MMP8-204ENST00000531168 SOGA1O94964 1423 aa16.08■□□□□ 0.16
MMP8-204ENST00000531168 ABCA10Q8WWZ4 1543 aa16.08■□□□□ 0.16
MMP8-204ENST00000531168 DNAJC5Q9H3Z4 198 aa16.07■□□□□ 0.16
MMP8-204ENST00000531168 AQRO60306 1485 aaKnown RBP eCLIP16.05■□□□□ 0.16
MMP8-204ENST00000531168 TDRD9Q8NDG6 1382 aaKnown RBP15.98■□□□□ 0.15
MMP8-204ENST00000531168 SNAPC4Q5SXM2 1469 aa15.97■□□□□ 0.15
MMP8-204ENST00000531168 GRIN2BQ13224 1484 aa15.97■□□□□ 0.15
MMP8-204ENST00000531168 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
MMP8-204ENST00000531168 GAPVD1Q14C86 1478 aa15.95■□□□□ 0.14
MMP8-204ENST00000531168 ADAMTS12P58397 1594 aa15.95■□□□□ 0.14
MMP8-204ENST00000531168 ERICH3Q5RHP9 1530 aa15.89■□□□□ 0.13
MMP8-204ENST00000531168 CLASP1Q7Z460 1538 aa15.89■□□□□ 0.13
MMP8-204ENST00000531168 SYNJ2O15056 1496 aa15.88■□□□□ 0.13
MMP8-204ENST00000531168 RIMBP3CA6NJZ7 1639 aa15.85■□□□□ 0.13
MMP8-204ENST00000531168 RIMBP3BA6NNM3 1639 aa15.85■□□□□ 0.13
MMP8-204ENST00000531168 RIMBP3Q9UFD9 1639 aa15.85■□□□□ 0.13
MMP8-204ENST00000531168 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
MMP8-204ENST00000531168 CUL7Q14999 1698 aa15.81■□□□□ 0.12
MMP8-204ENST00000531168 GRIN2AQ12879 1464 aa15.79■□□□□ 0.12
MMP8-204ENST00000531168 CEP170Q5SW79 1584 aa15.79■□□□□ 0.12
MMP8-204ENST00000531168 ARHGEF11O15085 1522 aa15.78■□□□□ 0.12
MMP8-204ENST00000531168 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.11
MMP8-204ENST00000531168 SHROOM2Q13796 1616 aa15.75■□□□□ 0.11
MMP8-204ENST00000531168 NUP160Q12769 1436 aa15.74■□□□□ 0.11
MMP8-204ENST00000531168 KIF27Q86VH2 1401 aa15.73■□□□□ 0.11
MMP8-204ENST00000531168 RUSC2Q8N2Y8 1516 aa15.73■□□□□ 0.11
MMP8-204ENST00000531168 FBLN2P98095 1184 aa15.69■□□□□ 0.1
MMP8-204ENST00000531168 CHMP7Q8WUX9 453 aaPredicted RBP15.68■□□□□ 0.1
MMP8-204ENST00000531168 ARAP1Q96P48 1450 aa15.65■□□□□ 0.1
MMP8-204ENST00000531168 IGF1RP08069 1367 aa15.65■□□□□ 0.1
MMP8-204ENST00000531168 ERCC6L2Q5T890 1561 aa15.62■□□□□ 0.09
MMP8-204ENST00000531168 CTTNBP2Q8WZ74 1663 aa15.6■□□□□ 0.09
MMP8-204ENST00000531168 CARMIL1Q5VZK9 1371 aa15.54■□□□□ 0.08
MMP8-204ENST00000531168 KIAA0586Q9BVV6 1533 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms