RNA–Protein interactions for RNA: ENST00000531142.1

NRIP3-204, Transcript of nuclear receptor interacting protein 3, humanhuman

TSL 4

Gene NRIP3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3-204ENST00000531142 NISCHQ9Y2I1 1504 aa16.96■□□□□ 0.31
NRIP3-204ENST00000531142 AEBP2Q6ZN18 517 aaPredicted RBP15.98■□□□□ 0.15
NRIP3-204ENST00000531142 ABCC9O60706 1549 aa15.71■□□□□ 0.11
NRIP3-204ENST00000531142 CCDC180Q9P1Z9 1646 aa15.24■□□□□ 0.03
NRIP3-204ENST00000531142 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
NRIP3-204ENST00000531142 CHIC1Q5VXU3 224 aa14.83□□□□□ -0.04
NRIP3-204ENST00000531142 RB1CC1Q8TDY2 1594 aa14.72□□□□□ -0.05
NRIP3-204ENST00000531142 PABPN1Q86U42 306 aaKnown RBP eCLIP14.66□□□□□ -0.06
NRIP3-204ENST00000531142 DCAF8L2P0C7V8 631 aa14.58□□□□□ -0.08
NRIP3-204ENST00000531142 NACADO15069 1562 aa14.55□□□□□ -0.08
NRIP3-204ENST00000531142 BICRAQ9NZM4 1560 aa14.36□□□□□ -0.11
NRIP3-204ENST00000531142 UNC13AQ9UPW8 1703 aa14.35□□□□□ -0.11
NRIP3-204ENST00000531142 MYO15BQ96JP2 1530 aa14.23□□□□□ -0.13
NRIP3-204ENST00000531142 POTEDQ86YR6 584 aa14.19□□□□□ -0.14
NRIP3-204ENST00000531142 CECR2Q9BXF3 1484 aa14.17□□□□□ -0.14
NRIP3-204ENST00000531142 CC2D2AQ9P2K1 1620 aa14.12□□□□□ -0.15
NRIP3-204ENST00000531142 DNAJC5Q9H3Z4 198 aa14.09□□□□□ -0.15
NRIP3-204ENST00000531142 SHROOM4Q9ULL8 1493 aa14.04□□□□□ -0.16
NRIP3-204ENST00000531142 EIF4G1Q04637 1599 aaKnown RBP14.01□□□□□ -0.17
NRIP3-204ENST00000531142 ZCCHC6Q5VYS8 1495 aaKnown RBP13.96□□□□□ -0.17
NRIP3-204ENST00000531142 SCRIBQ14160 1630 aa13.95□□□□□ -0.18
NRIP3-204ENST00000531142 DCAF1Q9Y4B6 1507 aa13.95□□□□□ -0.18
NRIP3-204ENST00000531142 SENP3Q9H4L4 574 aaPredicted RBP13.75□□□□□ -0.21
NRIP3-204ENST00000531142 CUX2O14529 1486 aa13.61□□□□□ -0.23
NRIP3-204ENST00000531142 ERCC6Q03468 1493 aa13.55□□□□□ -0.24
NRIP3-204ENST00000531142 NCAPD3P42695 1498 aa13.5□□□□□ -0.25
NRIP3-204ENST00000531142 NESP48681 1621 aa13.42□□□□□ -0.26
NRIP3-204ENST00000531142 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
NRIP3-204ENST00000531142 PHF23Q9BUL5 403 aaPredicted RBP13.4□□□□□ -0.26
NRIP3-204ENST00000531142 TRIM41Q8WV44 630 aa13.34□□□□□ -0.27
NRIP3-204ENST00000531142 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
NRIP3-204ENST00000531142 SMARCA2P51531 1590 aa13.29□□□□□ -0.28
NRIP3-204ENST00000531142 SMARCA4P51532 1647 aa13.26□□□□□ -0.29
NRIP3-204ENST00000531142 THOC2Q8NI27 1593 aaKnown RBP13.25□□□□□ -0.29
NRIP3-204ENST00000531142 BAZ1BQ9UIG0 1483 aaKnown RBP13.23□□□□□ -0.29
NRIP3-204ENST00000531142 LAMC3Q9Y6N6 1575 aa13.17□□□□□ -0.3
NRIP3-204ENST00000531142 PDS5BQ9NTI5 1447 aa13.16□□□□□ -0.3
NRIP3-204ENST00000531142 BAZ1AQ9NRL2 1556 aaPredicted RBP13.14□□□□□ -0.31
NRIP3-204ENST00000531142 PEG3Q9GZU2 1588 aa13.13□□□□□ -0.31
NRIP3-204ENST00000531142 KIF21AQ7Z4S6 1674 aa13.12□□□□□ -0.31
NRIP3-204ENST00000531142 MROH2BQ7Z745 1585 aa13.1□□□□□ -0.31
NRIP3-204ENST00000531142 CADPSQ9ULU8 1353 aa13.09□□□□□ -0.31
NRIP3-204ENST00000531142 MRC2Q9UBG0 1479 aa13.05□□□□□ -0.32
NRIP3-204ENST00000531142 OSCARQ8IYS5 282 aa13.03□□□□□ -0.32
NRIP3-204ENST00000531142 WDR62O43379 1518 aa13.02□□□□□ -0.33
NRIP3-204ENST00000531142 FOXD1Q16676 465 aa12.99□□□□□ -0.33
NRIP3-204ENST00000531142 CEP164Q9UPV0 1460 aa12.92□□□□□ -0.34
NRIP3-204ENST00000531142 FANCD2Q9BXW9 1451 aa12.91□□□□□ -0.34
NRIP3-204ENST00000531142 WIZO95785 1651 aa12.88□□□□□ -0.35
NRIP3-204ENST00000531142 CFTRP13569 1480 aa12.85□□□□□ -0.35
NRIP3-204ENST00000531142 URB2Q14146 1524 aaKnown RBP12.84□□□□□ -0.35
NRIP3-204ENST00000531142 RIMBP3CA6NJZ7 1639 aa12.8□□□□□ -0.36
NRIP3-204ENST00000531142 RIMBP3BA6NNM3 1639 aa12.8□□□□□ -0.36
NRIP3-204ENST00000531142 RIMBP3Q9UFD9 1639 aa12.8□□□□□ -0.36
NRIP3-204ENST00000531142 CYB5RLQ6IPT4 315 aa12.78□□□□□ -0.36
NRIP3-204ENST00000531142 ZNF608Q9ULD9 1512 aaPredicted RBP12.77□□□□□ -0.37
NRIP3-204ENST00000531142 ARHGEF11O15085 1522 aa12.75□□□□□ -0.37
NRIP3-204ENST00000531142 RSF1Q96T23 1441 aaPredicted RBP12.73□□□□□ -0.37
NRIP3-204ENST00000531142 TRHP20396 242 aaPredicted RBP12.71□□□□□ -0.37
NRIP3-204ENST00000531142 IFT140Q96RY7 1462 aa12.69□□□□□ -0.38
NRIP3-204ENST00000531142 TOP2AP11388 1531 aaKnown RBP12.67□□□□□ -0.38
NRIP3-204ENST00000531142 AQRO60306 1485 aaKnown RBP eCLIP12.63□□□□□ -0.39
NRIP3-204ENST00000531142 TOPBP1Q92547 1522 aa12.62□□□□□ -0.39
NRIP3-204ENST00000531142 ARAP1Q96P48 1450 aa12.62□□□□□ -0.39
NRIP3-204ENST00000531142 FBLN2P98095 1184 aa12.62□□□□□ -0.39
NRIP3-204ENST00000531142 CCDC88BA6NC98 1476 aa12.61□□□□□ -0.39
NRIP3-204ENST00000531142 EIF4G3O43432 1585 aaKnown RBP12.58□□□□□ -0.4
NRIP3-204ENST00000531142 MSH5O43196 834 aa12.55□□□□□ -0.4
NRIP3-204ENST00000531142 ABCC8Q09428 1581 aa12.54□□□□□ -0.4
NRIP3-204ENST00000531142 TARBP1Q13395 1621 aaKnown RBP12.52□□□□□ -0.4
NRIP3-204ENST00000531142 CHD1O14646 1710 aa12.52□□□□□ -0.41
NRIP3-204ENST00000531142 PRDM2Q13029 1718 aa12.52□□□□□ -0.41
NRIP3-204ENST00000531142 TDRD9Q8NDG6 1382 aaKnown RBP12.51□□□□□ -0.41
NRIP3-204ENST00000531142 DNMBPQ6XZF7 1577 aa12.51□□□□□ -0.41
NRIP3-204ENST00000531142 RAD54L2Q9Y4B4 1467 aa12.49□□□□□ -0.41
NRIP3-204ENST00000531142 POLA1P09884 1462 aaPredicted RBP12.48□□□□□ -0.41
NRIP3-204ENST00000531142 CHMP7Q8WUX9 453 aaPredicted RBP12.46□□□□□ -0.41
NRIP3-204ENST00000531142 SOGA1O94964 1423 aa12.45□□□□□ -0.42
NRIP3-204ENST00000531142 SNAPC4Q5SXM2 1469 aa12.43□□□□□ -0.42
NRIP3-204ENST00000531142 CLASP1Q7Z460 1538 aa12.42□□□□□ -0.42
NRIP3-204ENST00000531142 FGD5Q6ZNL6 1462 aa12.36□□□□□ -0.43
NRIP3-204ENST00000531142 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
NRIP3-204ENST00000531142 GAPVD1Q14C86 1478 aa12.34□□□□□ -0.43
NRIP3-204ENST00000531142 MAGI1Q96QZ7 1491 aaPredicted RBP12.34□□□□□ -0.43
NRIP3-204ENST00000531142 SYNJ2O15056 1496 aa12.34□□□□□ -0.43
NRIP3-204ENST00000531142 GRIN2BQ13224 1484 aa12.34□□□□□ -0.43
NRIP3-204ENST00000531142 CUX1P39880 1505 aa12.31□□□□□ -0.44
NRIP3-204ENST00000531142 WDR97A6NE52 1622 aa12.28□□□□□ -0.44
NRIP3-204ENST00000531142 ERCC6L2Q5T890 1561 aa12.26□□□□□ -0.45
NRIP3-204ENST00000531142 ABCA10Q8WWZ4 1543 aa12.19□□□□□ -0.46
NRIP3-204ENST00000531142 GRIN2AQ12879 1464 aa12.18□□□□□ -0.46
NRIP3-204ENST00000531142 PBRM1Q86U86 1689 aa12.18□□□□□ -0.46
NRIP3-204ENST00000531142 NUP160Q12769 1436 aa12.17□□□□□ -0.46
NRIP3-204ENST00000531142 CEP170Q5SW79 1584 aa12.17□□□□□ -0.46
NRIP3-204ENST00000531142 ABCA5Q8WWZ7 1642 aa12.16□□□□□ -0.46
NRIP3-204ENST00000531142 FAM69CQ0P6D2 419 aa12.13□□□□□ -0.47
NRIP3-204ENST00000531142 KDM4FA0A1W2PPD8 638 aa12.12□□□□□ -0.47
NRIP3-204ENST00000531142 JPH4Q96JJ6 628 aa12.11□□□□□ -0.47
NRIP3-204ENST00000531142 PRG4Q92954 1404 aaPredicted RBP12.11□□□□□ -0.47
NRIP3-204ENST00000531142 SHROOM2Q13796 1616 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 520.9 ms