RNA–Protein interactions for RNA: ENST00000531116.5

PKNOX2-205, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 2

Gene PKNOX2, Length 1,673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-205ENST00000531116 NISCHQ9Y2I1 1504 aa38.44■■■■□ 3.74
PKNOX2-205ENST00000531116 CCDC180Q9P1Z9 1646 aa34.13■■■■□ 3.05
PKNOX2-205ENST00000531116 ABCC9O60706 1549 aa33.5■■■□□ 2.95
PKNOX2-205ENST00000531116 DCAF8L2P0C7V8 631 aa32.24■■■□□ 2.75
PKNOX2-205ENST00000531116 RB1CC1Q8TDY2 1594 aa32.16■■■□□ 2.74
PKNOX2-205ENST00000531116 NACADO15069 1562 aa32.1■■■□□ 2.73
PKNOX2-205ENST00000531116 ZCCHC6Q5VYS8 1495 aaKnown RBP32.02■■■□□ 2.72
PKNOX2-205ENST00000531116 MYO15BQ96JP2 1530 aa31.88■■■□□ 2.69
PKNOX2-205ENST00000531116 DCAF1Q9Y4B6 1507 aa31.75■■■□□ 2.67
PKNOX2-205ENST00000531116 UNC13AQ9UPW8 1703 aa31.45■■■□□ 2.63
PKNOX2-205ENST00000531116 PABPN1Q86U42 306 aaKnown RBP eCLIP31.34■■■□□ 2.61
PKNOX2-205ENST00000531116 SCRIBQ14160 1630 aa31.23■■■□□ 2.59
PKNOX2-205ENST00000531116 BICRAQ9NZM4 1560 aa31.2■■■□□ 2.58
PKNOX2-205ENST00000531116 SHROOM4Q9ULL8 1493 aa30.8■■■□□ 2.52
PKNOX2-205ENST00000531116 DNAJC5BQ9UF47 199 aa30.78■■■□□ 2.52
PKNOX2-205ENST00000531116 EIF4G1Q04637 1599 aaKnown RBP30.39■■■□□ 2.46
PKNOX2-205ENST00000531116 CC2D2AQ9P2K1 1620 aa30.27■■■□□ 2.44
PKNOX2-205ENST00000531116 CECR2Q9BXF3 1484 aa30.08■■■□□ 2.41
PKNOX2-205ENST00000531116 SMARCA4P51532 1647 aa29.83■■■□□ 2.37
PKNOX2-205ENST00000531116 BAZ1AQ9NRL2 1556 aaPredicted RBP29.79■■■□□ 2.36
PKNOX2-205ENST00000531116 ATAD2BQ9ULI0 1458 aa29.68■■■□□ 2.34
PKNOX2-205ENST00000531116 MROH2BQ7Z745 1585 aa29.65■■■□□ 2.34
PKNOX2-205ENST00000531116 NCAPD3P42695 1498 aa29.64■■■□□ 2.33
PKNOX2-205ENST00000531116 SMARCA2P51531 1590 aa29.61■■■□□ 2.33
PKNOX2-205ENST00000531116 PEG3Q9GZU2 1588 aa29.5■■■□□ 2.31
PKNOX2-205ENST00000531116 HMGXB3Q12766 1538 aa29.48■■■□□ 2.31
PKNOX2-205ENST00000531116 BAZ1BQ9UIG0 1483 aaKnown RBP29.44■■■□□ 2.3
PKNOX2-205ENST00000531116 WIZO95785 1651 aa29.35■■■□□ 2.29
PKNOX2-205ENST00000531116 RSF1Q96T23 1441 aaPredicted RBP29.3■■■□□ 2.28
PKNOX2-205ENST00000531116 TOP2AP11388 1531 aaKnown RBP28.99■■■□□ 2.23
PKNOX2-205ENST00000531116 NESP48681 1621 aa28.99■■■□□ 2.23
PKNOX2-205ENST00000531116 ERCC6Q03468 1493 aa28.87■■■□□ 2.21
PKNOX2-205ENST00000531116 LAMC3Q9Y6N6 1575 aa28.86■■■□□ 2.21
PKNOX2-205ENST00000531116 CADPSQ9ULU8 1353 aa28.8■■■□□ 2.2
PKNOX2-205ENST00000531116 CCDC88BA6NC98 1476 aa28.68■■■□□ 2.18
PKNOX2-205ENST00000531116 PDS5BQ9NTI5 1447 aa28.68■■■□□ 2.18
PKNOX2-205ENST00000531116 SUPT5HO00267 1087 aaKnown RBP28.64■■■□□ 2.18
PKNOX2-205ENST00000531116 KIF21AQ7Z4S6 1674 aa28.62■■■□□ 2.17
PKNOX2-205ENST00000531116 CFTRP13569 1480 aa28.61■■■□□ 2.17
PKNOX2-205ENST00000531116 THOC2Q8NI27 1593 aaKnown RBP28.51■■■□□ 2.15
PKNOX2-205ENST00000531116 CUX2O14529 1486 aa28.5■■■□□ 2.15
PKNOX2-205ENST00000531116 FANCD2Q9BXW9 1451 aa28.48■■■□□ 2.15
PKNOX2-205ENST00000531116 CEP164Q9UPV0 1460 aa28.44■■■□□ 2.14
PKNOX2-205ENST00000531116 MRC2Q9UBG0 1479 aa28.39■■■□□ 2.13
PKNOX2-205ENST00000531116 PRDM2Q13029 1718 aa28.37■■■□□ 2.13
PKNOX2-205ENST00000531116 WDR62O43379 1518 aa28.28■■■□□ 2.12
PKNOX2-205ENST00000531116 URB2Q14146 1524 aaKnown RBP28.19■■■□□ 2.1
PKNOX2-205ENST00000531116 TOPBP1Q92547 1522 aa28.01■■■□□ 2.08
PKNOX2-205ENST00000531116 ABCC8Q09428 1581 aa27.97■■■□□ 2.07
PKNOX2-205ENST00000531116 DNMBPQ6XZF7 1577 aa27.97■■■□□ 2.07
PKNOX2-205ENST00000531116 IFT140Q96RY7 1462 aa27.83■■■□□ 2.05
PKNOX2-205ENST00000531116 CUX1P39880 1505 aa27.81■■■□□ 2.04
PKNOX2-205ENST00000531116 POLA1P09884 1462 aaPredicted RBP27.79■■■□□ 2.04
PKNOX2-205ENST00000531116 ZNF608Q9ULD9 1512 aaPredicted RBP27.74■■■□□ 2.03
PKNOX2-205ENST00000531116 FGD5Q6ZNL6 1462 aa27.73■■■□□ 2.03
PKNOX2-205ENST00000531116 RAD54L2Q9Y4B4 1467 aa27.69■■■□□ 2.02
PKNOX2-205ENST00000531116 TARBP1Q13395 1621 aaKnown RBP27.69■■■□□ 2.02
PKNOX2-205ENST00000531116 SOGA1O94964 1423 aa27.68■■■□□ 2.02
PKNOX2-205ENST00000531116 DNAJC5Q9H3Z4 198 aa27.68■■■□□ 2.02
PKNOX2-205ENST00000531116 WRNQ14191 1432 aaPredicted RBP eCLIP27.64■■■□□ 2.01
PKNOX2-205ENST00000531116 EIF4G3O43432 1585 aaKnown RBP27.61■■■□□ 2.01
PKNOX2-205ENST00000531116 AQRO60306 1485 aaKnown RBP eCLIP27.59■■■□□ 2.01
PKNOX2-205ENST00000531116 SYNJ1O43426 1573 aa27.58■■■□□ 2
PKNOX2-205ENST00000531116 TOP2BQ02880 1626 aa27.55■■■□□ 2
PKNOX2-205ENST00000531116 TDRD9Q8NDG6 1382 aaKnown RBP27.55■■■□□ 2
PKNOX2-205ENST00000531116 BIVM-ERCC5R4GMW8 1640 aa27.54■■■□□ 2
PKNOX2-205ENST00000531116 WDR97A6NE52 1622 aa27.46■■□□□ 1.99
PKNOX2-205ENST00000531116 ABCA10Q8WWZ4 1543 aa27.42■■□□□ 1.98
PKNOX2-205ENST00000531116 OSCARQ8IYS5 282 aa27.37■■□□□ 1.97
PKNOX2-205ENST00000531116 GAPVD1Q14C86 1478 aa27.35■■□□□ 1.97
PKNOX2-205ENST00000531116 GRIN2BQ13224 1484 aa27.33■■□□□ 1.97
PKNOX2-205ENST00000531116 SNAPC4Q5SXM2 1469 aa27.33■■□□□ 1.96
PKNOX2-205ENST00000531116 ABCA5Q8WWZ7 1642 aa27.32■■□□□ 1.96
PKNOX2-205ENST00000531116 FBLN2P98095 1184 aa27.3■■□□□ 1.96
PKNOX2-205ENST00000531116 PBRM1Q86U86 1689 aa27.29■■□□□ 1.96
PKNOX2-205ENST00000531116 CHD1O14646 1710 aa27.27■■□□□ 1.96
PKNOX2-205ENST00000531116 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
PKNOX2-205ENST00000531116 CHMP7Q8WUX9 453 aaPredicted RBP27.2■■□□□ 1.94
PKNOX2-205ENST00000531116 SYNJ2O15056 1496 aa27.16■■□□□ 1.94
PKNOX2-205ENST00000531116 ERICH3Q5RHP9 1530 aa27.09■■□□□ 1.93
PKNOX2-205ENST00000531116 ADAMTS12P58397 1594 aa27.06■■□□□ 1.92
PKNOX2-205ENST00000531116 KIF27Q86VH2 1401 aa27.05■■□□□ 1.92
PKNOX2-205ENST00000531116 FHAD1B1AJZ9 1412 aa27.02■■□□□ 1.92
PKNOX2-205ENST00000531116 TRIM41Q8WV44 630 aa27.02■■□□□ 1.92
PKNOX2-205ENST00000531116 GRIN2AQ12879 1464 aa26.99■■□□□ 1.91
PKNOX2-205ENST00000531116 CLASP1Q7Z460 1538 aa26.95■■□□□ 1.91
PKNOX2-205ENST00000531116 IGF1RP08069 1367 aa26.95■■□□□ 1.9
PKNOX2-205ENST00000531116 RIMBP3CA6NJZ7 1639 aa26.93■■□□□ 1.9
PKNOX2-205ENST00000531116 RIMBP3BA6NNM3 1639 aa26.93■■□□□ 1.9
PKNOX2-205ENST00000531116 RIMBP3Q9UFD9 1639 aa26.93■■□□□ 1.9
PKNOX2-205ENST00000531116 ARHGEF11O15085 1522 aa26.92■■□□□ 1.9
PKNOX2-205ENST00000531116 CEP170Q5SW79 1584 aa26.87■■□□□ 1.89
PKNOX2-205ENST00000531116 RUSC2Q8N2Y8 1516 aa26.86■■□□□ 1.89
PKNOX2-205ENST00000531116 NUP160Q12769 1436 aa26.85■■□□□ 1.89
PKNOX2-205ENST00000531116 CUL7Q14999 1698 aa26.85■■□□□ 1.89
PKNOX2-205ENST00000531116 CARMIL1Q5VZK9 1371 aa26.79■■□□□ 1.88
PKNOX2-205ENST00000531116 CYB5RLQ6IPT4 315 aa26.72■■□□□ 1.87
PKNOX2-205ENST00000531116 ARAP1Q96P48 1450 aa26.71■■□□□ 1.87
PKNOX2-205ENST00000531116 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
PKNOX2-205ENST00000531116 SHROOM2Q13796 1616 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms