RNA–Protein interactions for RNA: ENST00000531003.1

BCO2-212, Transcript of beta-carotene oxygenase 2, humanhuman

TSL 4

Gene BCO2, Length 494 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCO2-212ENST00000531003 NISCHQ9Y2I1 1504 aa28.69■■■□□ 2.18
BCO2-212ENST00000531003 ABCC9O60706 1549 aa25.79■■□□□ 1.72
BCO2-212ENST00000531003 CCDC180Q9P1Z9 1646 aa25.75■■□□□ 1.71
BCO2-212ENST00000531003 RB1CC1Q8TDY2 1594 aa24.58■■□□□ 1.52
BCO2-212ENST00000531003 DCAF8L2P0C7V8 631 aa24.41■■□□□ 1.5
BCO2-212ENST00000531003 NACADO15069 1562 aa24.38■■□□□ 1.49
BCO2-212ENST00000531003 DNAJC5BQ9UF47 199 aa24.13■■□□□ 1.45
BCO2-212ENST00000531003 PABPN1Q86U42 306 aaKnown RBP eCLIP24.03■■□□□ 1.44
BCO2-212ENST00000531003 MYO15BQ96JP2 1530 aa24.01■■□□□ 1.43
BCO2-212ENST00000531003 UNC13AQ9UPW8 1703 aa23.89■■□□□ 1.41
BCO2-212ENST00000531003 ZCCHC6Q5VYS8 1495 aaKnown RBP23.74■■□□□ 1.39
BCO2-212ENST00000531003 BICRAQ9NZM4 1560 aa23.73■■□□□ 1.39
BCO2-212ENST00000531003 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
BCO2-212ENST00000531003 SHROOM4Q9ULL8 1493 aa23.52■■□□□ 1.36
BCO2-212ENST00000531003 SCRIBQ14160 1630 aa23.47■■□□□ 1.35
BCO2-212ENST00000531003 CC2D2AQ9P2K1 1620 aa23.27■■□□□ 1.32
BCO2-212ENST00000531003 CECR2Q9BXF3 1484 aa23.25■■□□□ 1.31
BCO2-212ENST00000531003 EIF4G1Q04637 1599 aaKnown RBP23.22■■□□□ 1.31
BCO2-212ENST00000531003 NCAPD3P42695 1498 aa22.49■■□□□ 1.19
BCO2-212ENST00000531003 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
BCO2-212ENST00000531003 SMARCA2P51531 1590 aa22.4■■□□□ 1.18
BCO2-212ENST00000531003 SMARCA4P51532 1647 aa22.37■■□□□ 1.17
BCO2-212ENST00000531003 ERCC6Q03468 1493 aa22.35■■□□□ 1.17
BCO2-212ENST00000531003 HMGXB3Q12766 1538 aa22.31■■□□□ 1.16
BCO2-212ENST00000531003 BAZ1AQ9NRL2 1556 aaPredicted RBP22.3■■□□□ 1.16
BCO2-212ENST00000531003 DNAJC5Q9H3Z4 198 aa22.27■■□□□ 1.16
BCO2-212ENST00000531003 CUX2O14529 1486 aa22.26■■□□□ 1.15
BCO2-212ENST00000531003 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
BCO2-212ENST00000531003 PEG3Q9GZU2 1588 aa22.13■■□□□ 1.13
BCO2-212ENST00000531003 NESP48681 1621 aa22.1■■□□□ 1.13
BCO2-212ENST00000531003 MROH2BQ7Z745 1585 aa22.07■■□□□ 1.12
BCO2-212ENST00000531003 LAMC3Q9Y6N6 1575 aa22.01■■□□□ 1.11
BCO2-212ENST00000531003 PDS5BQ9NTI5 1447 aa21.95■■□□□ 1.1
BCO2-212ENST00000531003 THOC2Q8NI27 1593 aaKnown RBP21.86■■□□□ 1.09
BCO2-212ENST00000531003 CADPSQ9ULU8 1353 aa21.84■■□□□ 1.09
BCO2-212ENST00000531003 KIF21AQ7Z4S6 1674 aa21.82■■□□□ 1.08
BCO2-212ENST00000531003 WIZO95785 1651 aa21.81■■□□□ 1.08
BCO2-212ENST00000531003 MRC2Q9UBG0 1479 aa21.7■■□□□ 1.06
BCO2-212ENST00000531003 RSF1Q96T23 1441 aaPredicted RBP21.63■■□□□ 1.05
BCO2-212ENST00000531003 CEP164Q9UPV0 1460 aa21.63■■□□□ 1.05
BCO2-212ENST00000531003 WDR62O43379 1518 aa21.6■■□□□ 1.05
BCO2-212ENST00000531003 FANCD2Q9BXW9 1451 aa21.58■■□□□ 1.05
BCO2-212ENST00000531003 TOP2AP11388 1531 aaKnown RBP21.56■■□□□ 1.04
BCO2-212ENST00000531003 CFTRP13569 1480 aa21.55■■□□□ 1.04
BCO2-212ENST00000531003 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
BCO2-212ENST00000531003 URB2Q14146 1524 aaKnown RBP21.34■■□□□ 1.01
BCO2-212ENST00000531003 OSCARQ8IYS5 282 aa21.33■■□□□ 1.01
BCO2-212ENST00000531003 CCDC88BA6NC98 1476 aa21.32■■□□□ 1
BCO2-212ENST00000531003 PRDM2Q13029 1718 aa21.32■■□□□ 1
BCO2-212ENST00000531003 IFT140Q96RY7 1462 aa21.2■□□□□ 0.98
BCO2-212ENST00000531003 ABCC8Q09428 1581 aa21.19■□□□□ 0.98
BCO2-212ENST00000531003 TOPBP1Q92547 1522 aa21.14■□□□□ 0.98
BCO2-212ENST00000531003 ZNF608Q9ULD9 1512 aaPredicted RBP21.09■□□□□ 0.97
BCO2-212ENST00000531003 DNMBPQ6XZF7 1577 aa21.08■□□□□ 0.97
BCO2-212ENST00000531003 SUPT5HO00267 1087 aaKnown RBP21.04■□□□□ 0.96
BCO2-212ENST00000531003 EIF4G3O43432 1585 aaKnown RBP20.98■□□□□ 0.95
BCO2-212ENST00000531003 FBLN2P98095 1184 aa20.94■□□□□ 0.94
BCO2-212ENST00000531003 AQRO60306 1485 aaKnown RBP eCLIP20.94■□□□□ 0.94
BCO2-212ENST00000531003 POLA1P09884 1462 aaPredicted RBP20.92■□□□□ 0.94
BCO2-212ENST00000531003 RIMBP3CA6NJZ7 1639 aa20.92■□□□□ 0.94
BCO2-212ENST00000531003 RIMBP3BA6NNM3 1639 aa20.92■□□□□ 0.94
BCO2-212ENST00000531003 TARBP1Q13395 1621 aaKnown RBP20.92■□□□□ 0.94
BCO2-212ENST00000531003 RIMBP3Q9UFD9 1639 aa20.92■□□□□ 0.94
BCO2-212ENST00000531003 SOGA1O94964 1423 aa20.89■□□□□ 0.94
BCO2-212ENST00000531003 ARHGEF11O15085 1522 aa20.87■□□□□ 0.93
BCO2-212ENST00000531003 RAD54L2Q9Y4B4 1467 aa20.84■□□□□ 0.93
BCO2-212ENST00000531003 CHD1O14646 1710 aa20.83■□□□□ 0.92
BCO2-212ENST00000531003 TDRD9Q8NDG6 1382 aaKnown RBP20.83■□□□□ 0.92
BCO2-212ENST00000531003 CYB5RLQ6IPT4 315 aa20.81■□□□□ 0.92
BCO2-212ENST00000531003 FGD5Q6ZNL6 1462 aa20.8■□□□□ 0.92
BCO2-212ENST00000531003 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
BCO2-212ENST00000531003 CHMP7Q8WUX9 453 aaPredicted RBP20.77■□□□□ 0.92
BCO2-212ENST00000531003 CUX1P39880 1505 aa20.74■□□□□ 0.91
BCO2-212ENST00000531003 SNAPC4Q5SXM2 1469 aa20.72■□□□□ 0.91
BCO2-212ENST00000531003 GRIN2BQ13224 1484 aa20.7■□□□□ 0.9
BCO2-212ENST00000531003 MAGI1Q96QZ7 1491 aaPredicted RBP20.69■□□□□ 0.9
BCO2-212ENST00000531003 TRHP20396 242 aaPredicted RBP20.66■□□□□ 0.9
BCO2-212ENST00000531003 SYNJ1O43426 1573 aa20.65■□□□□ 0.9
BCO2-212ENST00000531003 ARAP1Q96P48 1450 aa20.63■□□□□ 0.89
BCO2-212ENST00000531003 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
BCO2-212ENST00000531003 GAPVD1Q14C86 1478 aa20.62■□□□□ 0.89
BCO2-212ENST00000531003 CLASP1Q7Z460 1538 aa20.57■□□□□ 0.88
BCO2-212ENST00000531003 ABCA10Q8WWZ4 1543 aa20.57■□□□□ 0.88
BCO2-212ENST00000531003 PBRM1Q86U86 1689 aa20.56■□□□□ 0.88
BCO2-212ENST00000531003 WRNQ14191 1432 aaPredicted RBP eCLIP20.55■□□□□ 0.88
BCO2-212ENST00000531003 ABCA5Q8WWZ7 1642 aa20.49■□□□□ 0.87
BCO2-212ENST00000531003 TOP2BQ02880 1626 aa20.43■□□□□ 0.86
BCO2-212ENST00000531003 BIVM-ERCC5R4GMW8 1640 aa20.42■□□□□ 0.86
BCO2-212ENST00000531003 GRIN2AQ12879 1464 aa20.41■□□□□ 0.86
BCO2-212ENST00000531003 FHAD1B1AJZ9 1412 aa20.36■□□□□ 0.85
BCO2-212ENST00000531003 ADAMTS12P58397 1594 aa20.35■□□□□ 0.85
BCO2-212ENST00000531003 ERICH3Q5RHP9 1530 aa20.32■□□□□ 0.84
BCO2-212ENST00000531003 NUP160Q12769 1436 aa20.31■□□□□ 0.84
BCO2-212ENST00000531003 CEP170Q5SW79 1584 aa20.29■□□□□ 0.84
BCO2-212ENST00000531003 ERCC6L2Q5T890 1561 aa20.21■□□□□ 0.83
BCO2-212ENST00000531003 JPH4Q96JJ6 628 aa20.2■□□□□ 0.82
BCO2-212ENST00000531003 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
BCO2-212ENST00000531003 PRG4Q92954 1404 aaPredicted RBP20.18■□□□□ 0.82
BCO2-212ENST00000531003 NPM1P06748 294 aaKnown RBP eCLIP20.13■□□□□ 0.81
BCO2-212ENST00000531003 KIF27Q86VH2 1401 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms