RNA–Protein interactions for RNA: ENST00000530984.1

GRHL3-209, Transcript of grainyhead like transcription factor 3, humanhuman

TSL 4

Gene GRHL3, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRHL3-209ENST00000530984 NISCHQ9Y2I1 1504 aa30.04■■■□□ 2.4
GRHL3-209ENST00000530984 CCDC180Q9P1Z9 1646 aa26.88■■□□□ 1.89
GRHL3-209ENST00000530984 ABCC9O60706 1549 aa26.2■■□□□ 1.79
GRHL3-209ENST00000530984 RB1CC1Q8TDY2 1594 aa25.22■■□□□ 1.63
GRHL3-209ENST00000530984 NACADO15069 1562 aa25.16■■□□□ 1.62
GRHL3-209ENST00000530984 ZCCHC6Q5VYS8 1495 aaKnown RBP25.04■■□□□ 1.6
GRHL3-209ENST00000530984 DCAF8L2P0C7V8 631 aa25■■□□□ 1.59
GRHL3-209ENST00000530984 MYO15BQ96JP2 1530 aa24.94■■□□□ 1.58
GRHL3-209ENST00000530984 UNC13AQ9UPW8 1703 aa24.88■■□□□ 1.57
GRHL3-209ENST00000530984 DCAF1Q9Y4B6 1507 aa24.85■■□□□ 1.57
GRHL3-209ENST00000530984 BICRAQ9NZM4 1560 aa24.5■■□□□ 1.51
GRHL3-209ENST00000530984 SCRIBQ14160 1630 aa24.49■■□□□ 1.51
GRHL3-209ENST00000530984 PABPN1Q86U42 306 aaKnown RBP eCLIP24.38■■□□□ 1.49
GRHL3-209ENST00000530984 SHROOM4Q9ULL8 1493 aa24.14■■□□□ 1.46
GRHL3-209ENST00000530984 DNAJC5BQ9UF47 199 aa23.98■■□□□ 1.43
GRHL3-209ENST00000530984 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
GRHL3-209ENST00000530984 CC2D2AQ9P2K1 1620 aa23.77■■□□□ 1.4
GRHL3-209ENST00000530984 CECR2Q9BXF3 1484 aa23.52■■□□□ 1.36
GRHL3-209ENST00000530984 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
GRHL3-209ENST00000530984 BAZ1AQ9NRL2 1556 aaPredicted RBP23.31■■□□□ 1.32
GRHL3-209ENST00000530984 SMARCA2P51531 1590 aa23.19■■□□□ 1.3
GRHL3-209ENST00000530984 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
GRHL3-209ENST00000530984 ATAD2BQ9ULI0 1458 aa23.17■■□□□ 1.3
GRHL3-209ENST00000530984 NCAPD3P42695 1498 aa23.13■■□□□ 1.29
GRHL3-209ENST00000530984 PEG3Q9GZU2 1588 aa23.13■■□□□ 1.29
GRHL3-209ENST00000530984 HMGXB3Q12766 1538 aa23.12■■□□□ 1.29
GRHL3-209ENST00000530984 BAZ1BQ9UIG0 1483 aaKnown RBP23.02■■□□□ 1.28
GRHL3-209ENST00000530984 WIZO95785 1651 aa23.01■■□□□ 1.27
GRHL3-209ENST00000530984 RSF1Q96T23 1441 aaPredicted RBP22.82■■□□□ 1.24
GRHL3-209ENST00000530984 TOP2AP11388 1531 aaKnown RBP22.7■■□□□ 1.22
GRHL3-209ENST00000530984 NESP48681 1621 aa22.68■■□□□ 1.22
GRHL3-209ENST00000530984 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
GRHL3-209ENST00000530984 KIF21AQ7Z4S6 1674 aa22.58■■□□□ 1.2
GRHL3-209ENST00000530984 ERCC6Q03468 1493 aa22.57■■□□□ 1.2
GRHL3-209ENST00000530984 PRDM2Q13029 1718 aa22.48■■□□□ 1.19
GRHL3-209ENST00000530984 THOC2Q8NI27 1593 aaKnown RBP22.43■■□□□ 1.18
GRHL3-209ENST00000530984 CADPSQ9ULU8 1353 aa22.43■■□□□ 1.18
GRHL3-209ENST00000530984 CCDC88BA6NC98 1476 aa22.37■■□□□ 1.17
GRHL3-209ENST00000530984 PDS5BQ9NTI5 1447 aa22.37■■□□□ 1.17
GRHL3-209ENST00000530984 CUX2O14529 1486 aa22.34■■□□□ 1.17
GRHL3-209ENST00000530984 CFTRP13569 1480 aa22.34■■□□□ 1.17
GRHL3-209ENST00000530984 FANCD2Q9BXW9 1451 aa22.25■■□□□ 1.15
GRHL3-209ENST00000530984 CEP164Q9UPV0 1460 aa22.25■■□□□ 1.15
GRHL3-209ENST00000530984 MRC2Q9UBG0 1479 aa22.22■■□□□ 1.15
GRHL3-209ENST00000530984 WDR62O43379 1518 aa22.18■■□□□ 1.14
GRHL3-209ENST00000530984 SUPT5HO00267 1087 aaKnown RBP22.18■■□□□ 1.14
GRHL3-209ENST00000530984 URB2Q14146 1524 aaKnown RBP22.06■■□□□ 1.12
GRHL3-209ENST00000530984 DNMBPQ6XZF7 1577 aa21.93■■□□□ 1.1
GRHL3-209ENST00000530984 TOPBP1Q92547 1522 aa21.92■■□□□ 1.1
GRHL3-209ENST00000530984 ABCC8Q09428 1581 aa21.86■■□□□ 1.09
GRHL3-209ENST00000530984 CUX1P39880 1505 aa21.75■■□□□ 1.07
GRHL3-209ENST00000530984 TARBP1Q13395 1621 aaKnown RBP21.74■■□□□ 1.07
GRHL3-209ENST00000530984 IFT140Q96RY7 1462 aa21.74■■□□□ 1.07
GRHL3-209ENST00000530984 POLA1P09884 1462 aaPredicted RBP21.71■■□□□ 1.07
GRHL3-209ENST00000530984 EIF4G3O43432 1585 aaKnown RBP21.7■■□□□ 1.06
GRHL3-209ENST00000530984 ZNF608Q9ULD9 1512 aaPredicted RBP21.68■■□□□ 1.06
GRHL3-209ENST00000530984 FGD5Q6ZNL6 1462 aa21.67■■□□□ 1.06
GRHL3-209ENST00000530984 WDR97A6NE52 1622 aa21.66■■□□□ 1.06
GRHL3-209ENST00000530984 BIVM-ERCC5R4GMW8 1640 aa21.65■■□□□ 1.06
GRHL3-209ENST00000530984 RAD54L2Q9Y4B4 1467 aa21.61■■□□□ 1.05
GRHL3-209ENST00000530984 SYNJ1O43426 1573 aa21.6■■□□□ 1.05
GRHL3-209ENST00000530984 DNAJC5Q9H3Z4 198 aa21.59■■□□□ 1.05
GRHL3-209ENST00000530984 TOP2BQ02880 1626 aa21.58■■□□□ 1.05
GRHL3-209ENST00000530984 SOGA1O94964 1423 aa21.56■■□□□ 1.04
GRHL3-209ENST00000530984 WRNQ14191 1432 aaPredicted RBP eCLIP21.54■■□□□ 1.04
GRHL3-209ENST00000530984 PBRM1Q86U86 1689 aa21.53■■□□□ 1.04
GRHL3-209ENST00000530984 CHD1O14646 1710 aa21.52■■□□□ 1.04
GRHL3-209ENST00000530984 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.03
GRHL3-209ENST00000530984 ABCA5Q8WWZ7 1642 aa21.46■■□□□ 1.03
GRHL3-209ENST00000530984 TDRD9Q8NDG6 1382 aaKnown RBP21.45■■□□□ 1.02
GRHL3-209ENST00000530984 ABCA10Q8WWZ4 1543 aa21.43■■□□□ 1.02
GRHL3-209ENST00000530984 SNAPC4Q5SXM2 1469 aa21.37■■□□□ 1.01
GRHL3-209ENST00000530984 GRIN2BQ13224 1484 aa21.35■■□□□ 1.01
GRHL3-209ENST00000530984 GAPVD1Q14C86 1478 aa21.35■■□□□ 1.01
GRHL3-209ENST00000530984 MAGI1Q96QZ7 1491 aaPredicted RBP21.32■■□□□ 1
GRHL3-209ENST00000530984 OSCARQ8IYS5 282 aa21.29■■□□□ 1
GRHL3-209ENST00000530984 ADAMTS12P58397 1594 aa21.24■□□□□ 0.99
GRHL3-209ENST00000530984 SYNJ2O15056 1496 aa21.23■□□□□ 0.99
GRHL3-209ENST00000530984 FBLN2P98095 1184 aa21.21■□□□□ 0.99
GRHL3-209ENST00000530984 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
GRHL3-209ENST00000530984 RIMBP3CA6NJZ7 1639 aa21.18■□□□□ 0.98
GRHL3-209ENST00000530984 RIMBP3BA6NNM3 1639 aa21.18■□□□□ 0.98
GRHL3-209ENST00000530984 RIMBP3Q9UFD9 1639 aa21.18■□□□□ 0.98
GRHL3-209ENST00000530984 CLASP1Q7Z460 1538 aa21.15■□□□□ 0.98
GRHL3-209ENST00000530984 CHMP7Q8WUX9 453 aaPredicted RBP21.13■□□□□ 0.97
GRHL3-209ENST00000530984 GRIN2AQ12879 1464 aa21.11■□□□□ 0.97
GRHL3-209ENST00000530984 ARHGEF11O15085 1522 aa21.1■□□□□ 0.97
GRHL3-209ENST00000530984 CUL7Q14999 1698 aa21.09■□□□□ 0.97
GRHL3-209ENST00000530984 FHAD1B1AJZ9 1412 aa21.08■□□□□ 0.97
GRHL3-209ENST00000530984 KIF27Q86VH2 1401 aa21.07■□□□□ 0.96
GRHL3-209ENST00000530984 CEP170Q5SW79 1584 aa21.06■□□□□ 0.96
GRHL3-209ENST00000530984 NUP160Q12769 1436 aa20.98■□□□□ 0.95
GRHL3-209ENST00000530984 RUSC2Q8N2Y8 1516 aa20.95■□□□□ 0.94
GRHL3-209ENST00000530984 SHROOM2Q13796 1616 aa20.94■□□□□ 0.94
GRHL3-209ENST00000530984 IGF1RP08069 1367 aa20.94■□□□□ 0.94
GRHL3-209ENST00000530984 TRIM41Q8WV44 630 aa20.93■□□□□ 0.94
GRHL3-209ENST00000530984 ARAP1Q96P48 1450 aa20.92■□□□□ 0.94
GRHL3-209ENST00000530984 ERCC6L2Q5T890 1561 aa20.87■□□□□ 0.93
GRHL3-209ENST00000530984 CARMIL1Q5VZK9 1371 aa20.84■□□□□ 0.93
GRHL3-209ENST00000530984 CTTNBP2Q8WZ74 1663 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms