RNA–Protein interactions for RNA: ENST00000530788.1

MSANTD4-204, Transcript of Myb/SANT DNA binding domain containing 4 with coiled-coils, humanhuman

TSL 1 (best)

Gene MSANTD4, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD4-204ENST00000530788 NISCHQ9Y2I1 1504 aa37.13■■■■□ 3.53
MSANTD4-204ENST00000530788 ABCC9O60706 1549 aa34.93■■■■□ 3.18
MSANTD4-204ENST00000530788 CCDC180Q9P1Z9 1646 aa33.8■■■■□ 3
MSANTD4-204ENST00000530788 DNAJC5BQ9UF47 199 aa33.78■■■■□ 3
MSANTD4-204ENST00000530788 RB1CC1Q8TDY2 1594 aa32.73■■■□□ 2.83
MSANTD4-204ENST00000530788 PABPN1Q86U42 306 aaKnown RBP eCLIP32.35■■■□□ 2.77
MSANTD4-204ENST00000530788 NACADO15069 1562 aa32.22■■■□□ 2.75
MSANTD4-204ENST00000530788 UNC13AQ9UPW8 1703 aa32.01■■■□□ 2.72
MSANTD4-204ENST00000530788 DCAF8L2P0C7V8 631 aa31.87■■■□□ 2.69
MSANTD4-204ENST00000530788 BICRAQ9NZM4 1560 aa31.84■■■□□ 2.69
MSANTD4-204ENST00000530788 DNAJC5Q9H3Z4 198 aa31.82■■■□□ 2.68
MSANTD4-204ENST00000530788 CECR2Q9BXF3 1484 aa31.58■■■□□ 2.65
MSANTD4-204ENST00000530788 CC2D2AQ9P2K1 1620 aa31.49■■■□□ 2.63
MSANTD4-204ENST00000530788 MYO15BQ96JP2 1530 aa31.38■■■□□ 2.61
MSANTD4-204ENST00000530788 SHROOM4Q9ULL8 1493 aa31.24■■■□□ 2.59
MSANTD4-204ENST00000530788 EIF4G1Q04637 1599 aaKnown RBP31.14■■■□□ 2.58
MSANTD4-204ENST00000530788 SCRIBQ14160 1630 aa30.76■■■□□ 2.51
MSANTD4-204ENST00000530788 DCAF1Q9Y4B6 1507 aa30.57■■■□□ 2.49
MSANTD4-204ENST00000530788 CUX2O14529 1486 aa30.53■■■□□ 2.48
MSANTD4-204ENST00000530788 ZCCHC6Q5VYS8 1495 aaKnown RBP30.52■■■□□ 2.48
MSANTD4-204ENST00000530788 ERCC6Q03468 1493 aa30.23■■■□□ 2.43
MSANTD4-204ENST00000530788 AEBP2Q6ZN18 517 aaPredicted RBP30.03■■■□□ 2.4
MSANTD4-204ENST00000530788 TRIM41Q8WV44 630 aa29.99■■■□□ 2.39
MSANTD4-204ENST00000530788 NCAPD3P42695 1498 aa29.76■■■□□ 2.35
MSANTD4-204ENST00000530788 NESP48681 1621 aa29.69■■■□□ 2.34
MSANTD4-204ENST00000530788 THOC2Q8NI27 1593 aaKnown RBP29.6■■■□□ 2.33
MSANTD4-204ENST00000530788 ATAD2BQ9ULI0 1458 aa29.52■■■□□ 2.32
MSANTD4-204ENST00000530788 HMGXB3Q12766 1538 aa29.43■■■□□ 2.3
MSANTD4-204ENST00000530788 SMARCA2P51531 1590 aa29.37■■■□□ 2.29
MSANTD4-204ENST00000530788 KIF21AQ7Z4S6 1674 aa29.28■■■□□ 2.28
MSANTD4-204ENST00000530788 LAMC3Q9Y6N6 1575 aa29.27■■■□□ 2.28
MSANTD4-204ENST00000530788 SMARCA4P51532 1647 aa29.21■■■□□ 2.27
MSANTD4-204ENST00000530788 BAZ1BQ9UIG0 1483 aaKnown RBP29.18■■■□□ 2.26
MSANTD4-204ENST00000530788 PDS5BQ9NTI5 1447 aa29.14■■■□□ 2.26
MSANTD4-204ENST00000530788 BAZ1AQ9NRL2 1556 aaPredicted RBP29.07■■■□□ 2.24
MSANTD4-204ENST00000530788 MRC2Q9UBG0 1479 aa28.97■■■□□ 2.23
MSANTD4-204ENST00000530788 OSCARQ8IYS5 282 aa28.96■■■□□ 2.23
MSANTD4-204ENST00000530788 WDR62O43379 1518 aa28.93■■■□□ 2.22
MSANTD4-204ENST00000530788 PEG3Q9GZU2 1588 aa28.92■■■□□ 2.22
MSANTD4-204ENST00000530788 CADPSQ9ULU8 1353 aa28.8■■■□□ 2.2
MSANTD4-204ENST00000530788 RIMBP3CA6NJZ7 1639 aa28.73■■■□□ 2.19
MSANTD4-204ENST00000530788 RIMBP3BA6NNM3 1639 aa28.73■■■□□ 2.19
MSANTD4-204ENST00000530788 RIMBP3Q9UFD9 1639 aa28.73■■■□□ 2.19
MSANTD4-204ENST00000530788 CHIC1Q5VXU3 224 aa28.67■■■□□ 2.18
MSANTD4-204ENST00000530788 CEP164Q9UPV0 1460 aa28.63■■■□□ 2.17
MSANTD4-204ENST00000530788 MROH2BQ7Z745 1585 aa28.61■■■□□ 2.17
MSANTD4-204ENST00000530788 ARHGEF11O15085 1522 aa28.52■■■□□ 2.16
MSANTD4-204ENST00000530788 FANCD2Q9BXW9 1451 aa28.49■■■□□ 2.15
MSANTD4-204ENST00000530788 TRHP20396 242 aaPredicted RBP28.45■■■□□ 2.14
MSANTD4-204ENST00000530788 CYB5RLQ6IPT4 315 aa28.39■■■□□ 2.14
MSANTD4-204ENST00000530788 URB2Q14146 1524 aaKnown RBP28.34■■■□□ 2.13
MSANTD4-204ENST00000530788 CFTRP13569 1480 aa28.24■■■□□ 2.11
MSANTD4-204ENST00000530788 WIZO95785 1651 aa28.23■■■□□ 2.11
MSANTD4-204ENST00000530788 ZNF608Q9ULD9 1512 aaPredicted RBP28.18■■■□□ 2.1
MSANTD4-204ENST00000530788 ARAP1Q96P48 1450 aa28.16■■■□□ 2.1
MSANTD4-204ENST00000530788 IFT140Q96RY7 1462 aa28.08■■■□□ 2.09
MSANTD4-204ENST00000530788 CHD1O14646 1710 aa27.98■■■□□ 2.07
MSANTD4-204ENST00000530788 EIF4G3O43432 1585 aaKnown RBP27.96■■■□□ 2.07
MSANTD4-204ENST00000530788 RSF1Q96T23 1441 aaPredicted RBP27.94■■■□□ 2.06
MSANTD4-204ENST00000530788 PRDM2Q13029 1718 aa27.88■■■□□ 2.05
MSANTD4-204ENST00000530788 FBLN2P98095 1184 aa27.84■■■□□ 2.05
MSANTD4-204ENST00000530788 TOPBP1Q92547 1522 aa27.83■■■□□ 2.05
MSANTD4-204ENST00000530788 AQRO60306 1485 aaKnown RBP eCLIP27.78■■■□□ 2.04
MSANTD4-204ENST00000530788 TOP2AP11388 1531 aaKnown RBP27.77■■■□□ 2.04
MSANTD4-204ENST00000530788 TARBP1Q13395 1621 aaKnown RBP27.67■■■□□ 2.02
MSANTD4-204ENST00000530788 ABCC8Q09428 1581 aa27.67■■■□□ 2.02
MSANTD4-204ENST00000530788 DNMBPQ6XZF7 1577 aa27.62■■■□□ 2.01
MSANTD4-204ENST00000530788 CLASP1Q7Z460 1538 aa27.62■■■□□ 2.01
MSANTD4-204ENST00000530788 SYNJ1O43426 1573 aa27.48■■□□□ 1.99
MSANTD4-204ENST00000530788 CCDC88BA6NC98 1476 aa27.48■■□□□ 1.99
MSANTD4-204ENST00000530788 POLA1P09884 1462 aaPredicted RBP27.47■■□□□ 1.99
MSANTD4-204ENST00000530788 SNAPC4Q5SXM2 1469 aa27.46■■□□□ 1.99
MSANTD4-204ENST00000530788 TDRD9Q8NDG6 1382 aaKnown RBP27.44■■□□□ 1.98
MSANTD4-204ENST00000530788 CHMP7Q8WUX9 453 aaPredicted RBP27.43■■□□□ 1.98
MSANTD4-204ENST00000530788 GAPVD1Q14C86 1478 aa27.42■■□□□ 1.98
MSANTD4-204ENST00000530788 RAD54L2Q9Y4B4 1467 aa27.41■■□□□ 1.98
MSANTD4-204ENST00000530788 ILDR1Q86SU0 546 aaPredicted RBP27.38■■□□□ 1.97
MSANTD4-204ENST00000530788 SOGA1O94964 1423 aa27.33■■□□□ 1.96
MSANTD4-204ENST00000530788 MAGI1Q96QZ7 1491 aaPredicted RBP27.32■■□□□ 1.96
MSANTD4-204ENST00000530788 WDR97A6NE52 1622 aa27.28■■□□□ 1.96
MSANTD4-204ENST00000530788 SYNJ2O15056 1496 aa27.26■■□□□ 1.95
MSANTD4-204ENST00000530788 GRIN2BQ13224 1484 aa27.21■■□□□ 1.95
MSANTD4-204ENST00000530788 FGD5Q6ZNL6 1462 aa27.15■■□□□ 1.94
MSANTD4-204ENST00000530788 KIF13AQ9H1H9 1805 aa27.13■■□□□ 1.93
MSANTD4-204ENST00000530788 ERCC6L2Q5T890 1561 aa27.13■■□□□ 1.93
MSANTD4-204ENST00000530788 PBRM1Q86U86 1689 aa27.05■■□□□ 1.92
MSANTD4-204ENST00000530788 KDM4FA0A1W2PPD8 638 aa27.04■■□□□ 1.92
MSANTD4-204ENST00000530788 CEP170Q5SW79 1584 aa26.96■■□□□ 1.91
MSANTD4-204ENST00000530788 CUX1P39880 1505 aa26.95■■□□□ 1.9
MSANTD4-204ENST00000530788 GRIN2AQ12879 1464 aa26.87■■□□□ 1.89
MSANTD4-204ENST00000530788 FAM69CQ0P6D2 419 aa26.86■■□□□ 1.89
MSANTD4-204ENST00000530788 SHROOM2Q13796 1616 aa26.83■■□□□ 1.89
MSANTD4-204ENST00000530788 ABCA5Q8WWZ7 1642 aa26.83■■□□□ 1.89
MSANTD4-204ENST00000530788 NUP160Q12769 1436 aa26.82■■□□□ 1.88
MSANTD4-204ENST00000530788 ABCC10Q5T3U5 1492 aa26.81■■□□□ 1.88
MSANTD4-204ENST00000530788 KDM6BO15054 1643 aa26.79■■□□□ 1.88
MSANTD4-204ENST00000530788 ABCA10Q8WWZ4 1543 aa26.75■■□□□ 1.87
MSANTD4-204ENST00000530788 DIP2BQ9P265 1576 aa26.72■■□□□ 1.87
MSANTD4-204ENST00000530788 ADAMTS12P58397 1594 aa26.71■■□□□ 1.87
MSANTD4-204ENST00000530788 MAPKBP1O60336 1514 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms