RNA–Protein interactions for RNA: ENST00000530714.6

PAX6-223, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-223ENST00000530714 NISCHQ9Y2I1 1504 aa26.85■■□□□ 1.89
PAX6-223ENST00000530714 CCDC180Q9P1Z9 1646 aa24.09■■□□□ 1.45
PAX6-223ENST00000530714 ABCC9O60706 1549 aa23.39■■□□□ 1.34
PAX6-223ENST00000530714 RB1CC1Q8TDY2 1594 aa22.57■■□□□ 1.2
PAX6-223ENST00000530714 NACADO15069 1562 aa22.54■■□□□ 1.2
PAX6-223ENST00000530714 MYO15BQ96JP2 1530 aa22.43■■□□□ 1.18
PAX6-223ENST00000530714 ZCCHC6Q5VYS8 1495 aaKnown RBP22.41■■□□□ 1.18
PAX6-223ENST00000530714 DCAF1Q9Y4B6 1507 aa22.3■■□□□ 1.16
PAX6-223ENST00000530714 UNC13AQ9UPW8 1703 aa22.25■■□□□ 1.15
PAX6-223ENST00000530714 DCAF8L2P0C7V8 631 aa22.04■■□□□ 1.12
PAX6-223ENST00000530714 BICRAQ9NZM4 1560 aa21.97■■□□□ 1.11
PAX6-223ENST00000530714 SCRIBQ14160 1630 aa21.81■■□□□ 1.08
PAX6-223ENST00000530714 SHROOM4Q9ULL8 1493 aa21.75■■□□□ 1.07
PAX6-223ENST00000530714 PABPN1Q86U42 306 aaKnown RBP eCLIP21.68■■□□□ 1.06
PAX6-223ENST00000530714 DNAJC5BQ9UF47 199 aa21.47■■□□□ 1.03
PAX6-223ENST00000530714 EIF4G1Q04637 1599 aaKnown RBP21.35■■□□□ 1.01
PAX6-223ENST00000530714 CC2D2AQ9P2K1 1620 aa21.26■□□□□ 0.99
PAX6-223ENST00000530714 CECR2Q9BXF3 1484 aa21.05■□□□□ 0.96
PAX6-223ENST00000530714 SMARCA4P51532 1647 aa20.92■□□□□ 0.94
PAX6-223ENST00000530714 BAZ1AQ9NRL2 1556 aaPredicted RBP20.83■□□□□ 0.92
PAX6-223ENST00000530714 PEG3Q9GZU2 1588 aa20.77■□□□□ 0.92
PAX6-223ENST00000530714 SMARCA2P51531 1590 aa20.75■□□□□ 0.91
PAX6-223ENST00000530714 HMGXB3Q12766 1538 aa20.74■□□□□ 0.91
PAX6-223ENST00000530714 NCAPD3P42695 1498 aa20.74■□□□□ 0.91
PAX6-223ENST00000530714 ATAD2BQ9ULI0 1458 aa20.73■□□□□ 0.91
PAX6-223ENST00000530714 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
PAX6-223ENST00000530714 BAZ1BQ9UIG0 1483 aaKnown RBP20.54■□□□□ 0.88
PAX6-223ENST00000530714 WIZO95785 1651 aa20.48■□□□□ 0.87
PAX6-223ENST00000530714 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
PAX6-223ENST00000530714 RSF1Q96T23 1441 aaPredicted RBP20.35■□□□□ 0.85
PAX6-223ENST00000530714 TOP2AP11388 1531 aaKnown RBP20.28■□□□□ 0.84
PAX6-223ENST00000530714 LAMC3Q9Y6N6 1575 aa20.28■□□□□ 0.84
PAX6-223ENST00000530714 NESP48681 1621 aa20.25■□□□□ 0.83
PAX6-223ENST00000530714 KIF21AQ7Z4S6 1674 aa20.17■□□□□ 0.82
PAX6-223ENST00000530714 THOC2Q8NI27 1593 aaKnown RBP20.14■□□□□ 0.81
PAX6-223ENST00000530714 ERCC6Q03468 1493 aa20.14■□□□□ 0.81
PAX6-223ENST00000530714 PRDM2Q13029 1718 aa20.08■□□□□ 0.81
PAX6-223ENST00000530714 CUX2O14529 1486 aa20.08■□□□□ 0.81
PAX6-223ENST00000530714 CADPSQ9ULU8 1353 aa20.05■□□□□ 0.8
PAX6-223ENST00000530714 CFTRP13569 1480 aa20■□□□□ 0.79
PAX6-223ENST00000530714 PDS5BQ9NTI5 1447 aa20■□□□□ 0.79
PAX6-223ENST00000530714 CCDC88BA6NC98 1476 aa19.93■□□□□ 0.78
PAX6-223ENST00000530714 WDR62O43379 1518 aa19.91■□□□□ 0.78
PAX6-223ENST00000530714 MRC2Q9UBG0 1479 aa19.88■□□□□ 0.77
PAX6-223ENST00000530714 FANCD2Q9BXW9 1451 aa19.87■□□□□ 0.77
PAX6-223ENST00000530714 CEP164Q9UPV0 1460 aa19.87■□□□□ 0.77
PAX6-223ENST00000530714 URB2Q14146 1524 aaKnown RBP19.73■□□□□ 0.75
PAX6-223ENST00000530714 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
PAX6-223ENST00000530714 DNMBPQ6XZF7 1577 aa19.61■□□□□ 0.73
PAX6-223ENST00000530714 TOPBP1Q92547 1522 aa19.59■□□□□ 0.73
PAX6-223ENST00000530714 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
PAX6-223ENST00000530714 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
PAX6-223ENST00000530714 IFT140Q96RY7 1462 aa19.46■□□□□ 0.71
PAX6-223ENST00000530714 EIF4G3O43432 1585 aaKnown RBP19.42■□□□□ 0.7
PAX6-223ENST00000530714 POLA1P09884 1462 aaPredicted RBP19.41■□□□□ 0.7
PAX6-223ENST00000530714 CUX1P39880 1505 aa19.41■□□□□ 0.7
PAX6-223ENST00000530714 DNAJC5Q9H3Z4 198 aa19.4■□□□□ 0.7
PAX6-223ENST00000530714 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
PAX6-223ENST00000530714 ZNF608Q9ULD9 1512 aaPredicted RBP19.38■□□□□ 0.69
PAX6-223ENST00000530714 FGD5Q6ZNL6 1462 aa19.34■□□□□ 0.69
PAX6-223ENST00000530714 BIVM-ERCC5R4GMW8 1640 aa19.33■□□□□ 0.69
PAX6-223ENST00000530714 TRIM41Q8WV44 630 aa19.29■□□□□ 0.68
PAX6-223ENST00000530714 TOP2BQ02880 1626 aa19.27■□□□□ 0.68
PAX6-223ENST00000530714 SYNJ1O43426 1573 aa19.25■□□□□ 0.67
PAX6-223ENST00000530714 RAD54L2Q9Y4B4 1467 aa19.25■□□□□ 0.67
PAX6-223ENST00000530714 CHD1O14646 1710 aa19.22■□□□□ 0.67
PAX6-223ENST00000530714 ABCA5Q8WWZ7 1642 aa19.21■□□□□ 0.67
PAX6-223ENST00000530714 PBRM1Q86U86 1689 aa19.2■□□□□ 0.66
PAX6-223ENST00000530714 SOGA1O94964 1423 aa19.2■□□□□ 0.66
PAX6-223ENST00000530714 AQRO60306 1485 aaKnown RBP eCLIP19.18■□□□□ 0.66
PAX6-223ENST00000530714 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.66
PAX6-223ENST00000530714 ABCA10Q8WWZ4 1543 aa19.17■□□□□ 0.66
PAX6-223ENST00000530714 TDRD9Q8NDG6 1382 aaKnown RBP19.09■□□□□ 0.65
PAX6-223ENST00000530714 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
PAX6-223ENST00000530714 SNAPC4Q5SXM2 1469 aa19.08■□□□□ 0.64
PAX6-223ENST00000530714 GRIN2BQ13224 1484 aa19.07■□□□□ 0.64
PAX6-223ENST00000530714 GAPVD1Q14C86 1478 aa19.04■□□□□ 0.64
PAX6-223ENST00000530714 ADAMTS12P58397 1594 aa19.01■□□□□ 0.63
PAX6-223ENST00000530714 SYNJ2O15056 1496 aa18.99■□□□□ 0.63
PAX6-223ENST00000530714 OSCARQ8IYS5 282 aa18.99■□□□□ 0.63
PAX6-223ENST00000530714 CLASP1Q7Z460 1538 aa18.99■□□□□ 0.63
PAX6-223ENST00000530714 RIMBP3CA6NJZ7 1639 aa18.97■□□□□ 0.63
PAX6-223ENST00000530714 RIMBP3BA6NNM3 1639 aa18.97■□□□□ 0.63
PAX6-223ENST00000530714 RIMBP3Q9UFD9 1639 aa18.97■□□□□ 0.63
PAX6-223ENST00000530714 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
PAX6-223ENST00000530714 ARHGEF11O15085 1522 aa18.92■□□□□ 0.62
PAX6-223ENST00000530714 EEA1Q15075 1411 aa18.91■□□□□ 0.62
PAX6-223ENST00000530714 GRIN2AQ12879 1464 aa18.87■□□□□ 0.61
PAX6-223ENST00000530714 CEP170Q5SW79 1584 aa18.84■□□□□ 0.61
PAX6-223ENST00000530714 FAM9AQ8IZU1 332 aaPredicted RBP18.83■□□□□ 0.6
PAX6-223ENST00000530714 CUL7Q14999 1698 aa18.82■□□□□ 0.6
PAX6-223ENST00000530714 FHAD1B1AJZ9 1412 aa18.82■□□□□ 0.6
PAX6-223ENST00000530714 NUP160Q12769 1436 aa18.81■□□□□ 0.6
PAX6-223ENST00000530714 LOC105371045A0A1W2PR82 267 aa18.8■□□□□ 0.6
PAX6-223ENST00000530714 SHROOM2Q13796 1616 aa18.79■□□□□ 0.6
PAX6-223ENST00000530714 FBLN2P98095 1184 aa18.77■□□□□ 0.6
PAX6-223ENST00000530714 ARAP1Q96P48 1450 aa18.77■□□□□ 0.59
PAX6-223ENST00000530714 RUSC2Q8N2Y8 1516 aa18.76■□□□□ 0.59
PAX6-223ENST00000530714 CHMP7Q8WUX9 453 aaPredicted RBP18.76■□□□□ 0.59
PAX6-223ENST00000530714 KIF27Q86VH2 1401 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms