RNA–Protein interactions for RNA: ENST00000530703.1

ABCA7-213, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 2

Gene ABCA7, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-213ENST00000530703 NISCHQ9Y2I1 1504 aa40.81■■■■■ 4.12
ABCA7-213ENST00000530703 CCDC180Q9P1Z9 1646 aa36.35■■■■□ 3.41
ABCA7-213ENST00000530703 ABCC9O60706 1549 aa35.48■■■■□ 3.27
ABCA7-213ENST00000530703 RB1CC1Q8TDY2 1594 aa34.16■■■■□ 3.06
ABCA7-213ENST00000530703 NACADO15069 1562 aa34.12■■■■□ 3.05
ABCA7-213ENST00000530703 DCAF8L2P0C7V8 631 aa34.02■■■■□ 3.04
ABCA7-213ENST00000530703 ZCCHC6Q5VYS8 1495 aaKnown RBP34.01■■■■□ 3.03
ABCA7-213ENST00000530703 MYO15BQ96JP2 1530 aa33.9■■■■□ 3.02
ABCA7-213ENST00000530703 DCAF1Q9Y4B6 1507 aa33.77■■■■□ 3
ABCA7-213ENST00000530703 UNC13AQ9UPW8 1703 aa33.49■■■□□ 2.95
ABCA7-213ENST00000530703 SCRIBQ14160 1630 aa33.14■■■□□ 2.9
ABCA7-213ENST00000530703 BICRAQ9NZM4 1560 aa33.14■■■□□ 2.9
ABCA7-213ENST00000530703 PABPN1Q86U42 306 aaKnown RBP eCLIP33.11■■■□□ 2.89
ABCA7-213ENST00000530703 SHROOM4Q9ULL8 1493 aa32.77■■■□□ 2.84
ABCA7-213ENST00000530703 DNAJC5BQ9UF47 199 aa32.5■■■□□ 2.79
ABCA7-213ENST00000530703 EIF4G1Q04637 1599 aaKnown RBP32.25■■■□□ 2.75
ABCA7-213ENST00000530703 CC2D2AQ9P2K1 1620 aa32.13■■■□□ 2.73
ABCA7-213ENST00000530703 CECR2Q9BXF3 1484 aa31.87■■■□□ 2.69
ABCA7-213ENST00000530703 SMARCA4P51532 1647 aa31.7■■■□□ 2.66
ABCA7-213ENST00000530703 BAZ1AQ9NRL2 1556 aaPredicted RBP31.64■■■□□ 2.66
ABCA7-213ENST00000530703 ATAD2BQ9ULI0 1458 aa31.48■■■□□ 2.63
ABCA7-213ENST00000530703 SMARCA2P51531 1590 aa31.47■■■□□ 2.63
ABCA7-213ENST00000530703 MROH2BQ7Z745 1585 aa31.46■■■□□ 2.63
ABCA7-213ENST00000530703 NCAPD3P42695 1498 aa31.45■■■□□ 2.62
ABCA7-213ENST00000530703 PEG3Q9GZU2 1588 aa31.38■■■□□ 2.61
ABCA7-213ENST00000530703 HMGXB3Q12766 1538 aa31.34■■■□□ 2.61
ABCA7-213ENST00000530703 BAZ1BQ9UIG0 1483 aaKnown RBP31.23■■■□□ 2.59
ABCA7-213ENST00000530703 WIZO95785 1651 aa31.16■■■□□ 2.58
ABCA7-213ENST00000530703 RSF1Q96T23 1441 aaPredicted RBP31.07■■■□□ 2.57
ABCA7-213ENST00000530703 TOP2AP11388 1531 aaKnown RBP30.81■■■□□ 2.52
ABCA7-213ENST00000530703 NESP48681 1621 aa30.72■■■□□ 2.51
ABCA7-213ENST00000530703 LAMC3Q9Y6N6 1575 aa30.66■■■□□ 2.5
ABCA7-213ENST00000530703 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
ABCA7-213ENST00000530703 CADPSQ9ULU8 1353 aa30.52■■■□□ 2.48
ABCA7-213ENST00000530703 KIF21AQ7Z4S6 1674 aa30.43■■■□□ 2.46
ABCA7-213ENST00000530703 CCDC88BA6NC98 1476 aa30.41■■■□□ 2.46
ABCA7-213ENST00000530703 PDS5BQ9NTI5 1447 aa30.4■■■□□ 2.46
ABCA7-213ENST00000530703 CFTRP13569 1480 aa30.36■■■□□ 2.45
ABCA7-213ENST00000530703 THOC2Q8NI27 1593 aaKnown RBP30.29■■■□□ 2.44
ABCA7-213ENST00000530703 PRDM2Q13029 1718 aa30.28■■■□□ 2.44
ABCA7-213ENST00000530703 SUPT5HO00267 1087 aaKnown RBP30.27■■■□□ 2.44
ABCA7-213ENST00000530703 CUX2O14529 1486 aa30.25■■■□□ 2.43
ABCA7-213ENST00000530703 FANCD2Q9BXW9 1451 aa30.2■■■□□ 2.43
ABCA7-213ENST00000530703 CEP164Q9UPV0 1460 aa30.18■■■□□ 2.42
ABCA7-213ENST00000530703 MRC2Q9UBG0 1479 aa30.12■■■□□ 2.41
ABCA7-213ENST00000530703 WDR62O43379 1518 aa30.03■■■□□ 2.4
ABCA7-213ENST00000530703 URB2Q14146 1524 aaKnown RBP29.91■■■□□ 2.38
ABCA7-213ENST00000530703 TOPBP1Q92547 1522 aa29.73■■■□□ 2.35
ABCA7-213ENST00000530703 DNMBPQ6XZF7 1577 aa29.72■■■□□ 2.35
ABCA7-213ENST00000530703 ABCC8Q09428 1581 aa29.71■■■□□ 2.35
ABCA7-213ENST00000530703 IFT140Q96RY7 1462 aa29.53■■■□□ 2.32
ABCA7-213ENST00000530703 CUX1P39880 1505 aa29.52■■■□□ 2.32
ABCA7-213ENST00000530703 POLA1P09884 1462 aaPredicted RBP29.48■■■□□ 2.31
ABCA7-213ENST00000530703 TARBP1Q13395 1621 aaKnown RBP29.43■■■□□ 2.3
ABCA7-213ENST00000530703 FGD5Q6ZNL6 1462 aa29.41■■■□□ 2.3
ABCA7-213ENST00000530703 ZNF608Q9ULD9 1512 aaPredicted RBP29.4■■■□□ 2.3
ABCA7-213ENST00000530703 RAD54L2Q9Y4B4 1467 aa29.33■■■□□ 2.29
ABCA7-213ENST00000530703 EIF4G3O43432 1585 aaKnown RBP29.33■■■□□ 2.29
ABCA7-213ENST00000530703 SOGA1O94964 1423 aa29.32■■■□□ 2.28
ABCA7-213ENST00000530703 BIVM-ERCC5R4GMW8 1640 aa29.31■■■□□ 2.28
ABCA7-213ENST00000530703 WRNQ14191 1432 aaPredicted RBP eCLIP29.3■■■□□ 2.28
ABCA7-213ENST00000530703 TOP2BQ02880 1626 aa29.28■■■□□ 2.28
ABCA7-213ENST00000530703 SYNJ1O43426 1573 aa29.27■■■□□ 2.28
ABCA7-213ENST00000530703 DNAJC5Q9H3Z4 198 aa29.26■■■□□ 2.27
ABCA7-213ENST00000530703 WDR97A6NE52 1622 aa29.24■■■□□ 2.27
ABCA7-213ENST00000530703 AQRO60306 1485 aaKnown RBP eCLIP29.21■■■□□ 2.27
ABCA7-213ENST00000530703 TDRD9Q8NDG6 1382 aaKnown RBP29.15■■■□□ 2.26
ABCA7-213ENST00000530703 ABCA10Q8WWZ4 1543 aa29.12■■■□□ 2.25
ABCA7-213ENST00000530703 ABCA5Q8WWZ7 1642 aa29.05■■■□□ 2.24
ABCA7-213ENST00000530703 PBRM1Q86U86 1689 aa29.04■■■□□ 2.24
ABCA7-213ENST00000530703 GAPVD1Q14C86 1478 aa29.01■■■□□ 2.23
ABCA7-213ENST00000530703 CHD1O14646 1710 aa29■■■□□ 2.23
ABCA7-213ENST00000530703 GRIN2BQ13224 1484 aa29■■■□□ 2.23
ABCA7-213ENST00000530703 SNAPC4Q5SXM2 1469 aa28.97■■■□□ 2.23
ABCA7-213ENST00000530703 OSCARQ8IYS5 282 aa28.95■■■□□ 2.22
ABCA7-213ENST00000530703 MAGI1Q96QZ7 1491 aaPredicted RBP28.93■■■□□ 2.22
ABCA7-213ENST00000530703 FBLN2P98095 1184 aa28.84■■■□□ 2.21
ABCA7-213ENST00000530703 SYNJ2O15056 1496 aa28.81■■■□□ 2.2
ABCA7-213ENST00000530703 ERICH3Q5RHP9 1530 aa28.79■■■□□ 2.2
ABCA7-213ENST00000530703 ADAMTS12P58397 1594 aa28.76■■■□□ 2.19
ABCA7-213ENST00000530703 CHMP7Q8WUX9 453 aaPredicted RBP28.76■■■□□ 2.19
ABCA7-213ENST00000530703 KIF27Q86VH2 1401 aa28.69■■■□□ 2.18
ABCA7-213ENST00000530703 FHAD1B1AJZ9 1412 aa28.67■■■□□ 2.18
ABCA7-213ENST00000530703 GRIN2AQ12879 1464 aa28.64■■■□□ 2.17
ABCA7-213ENST00000530703 CLASP1Q7Z460 1538 aa28.63■■■□□ 2.17
ABCA7-213ENST00000530703 RIMBP3CA6NJZ7 1639 aa28.58■■■□□ 2.17
ABCA7-213ENST00000530703 RIMBP3BA6NNM3 1639 aa28.58■■■□□ 2.17
ABCA7-213ENST00000530703 RIMBP3Q9UFD9 1639 aa28.58■■■□□ 2.17
ABCA7-213ENST00000530703 TRIM41Q8WV44 630 aa28.58■■■□□ 2.17
ABCA7-213ENST00000530703 CUL7Q14999 1698 aa28.56■■■□□ 2.16
ABCA7-213ENST00000530703 ARHGEF11O15085 1522 aa28.55■■■□□ 2.16
ABCA7-213ENST00000530703 IGF1RP08069 1367 aa28.55■■■□□ 2.16
ABCA7-213ENST00000530703 CEP170Q5SW79 1584 aa28.52■■■□□ 2.16
ABCA7-213ENST00000530703 NUP160Q12769 1436 aa28.5■■■□□ 2.15
ABCA7-213ENST00000530703 RUSC2Q8N2Y8 1516 aa28.44■■■□□ 2.14
ABCA7-213ENST00000530703 CARMIL1Q5VZK9 1371 aa28.38■■■□□ 2.13
ABCA7-213ENST00000530703 SHROOM2Q13796 1616 aa28.33■■■□□ 2.13
ABCA7-213ENST00000530703 ARAP1Q96P48 1450 aa28.32■■■□□ 2.12
ABCA7-213ENST00000530703 CHIC1Q5VXU3 224 aa28.25■■■□□ 2.11
ABCA7-213ENST00000530703 RAPGEF2Q9Y4G8 1499 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms