RNA–Protein interactions for RNA: ENST00000530656.5

PRDM11-204, Transcript of PR/SET domain 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRDM11, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM11-204ENST00000530656 NISCHQ9Y2I1 1504 aa29.36■■■□□ 2.29
PRDM11-204ENST00000530656 CCDC180Q9P1Z9 1646 aa25.62■■□□□ 1.69
PRDM11-204ENST00000530656 ZCCHC6Q5VYS8 1495 aaKnown RBP24.71■■□□□ 1.55
PRDM11-204ENST00000530656 ABCC9O60706 1549 aa24.46■■□□□ 1.51
PRDM11-204ENST00000530656 DCAF1Q9Y4B6 1507 aa24.36■■□□□ 1.49
PRDM11-204ENST00000530656 DCAF8L2P0C7V8 631 aa24.08■■□□□ 1.45
PRDM11-204ENST00000530656 MYO15BQ96JP2 1530 aa24.03■■□□□ 1.44
PRDM11-204ENST00000530656 SHROOM4Q9ULL8 1493 aa23.94■■□□□ 1.42
PRDM11-204ENST00000530656 NACADO15069 1562 aa23.8■■□□□ 1.4
PRDM11-204ENST00000530656 RB1CC1Q8TDY2 1594 aa23.65■■□□□ 1.38
PRDM11-204ENST00000530656 SCRIBQ14160 1630 aa23.46■■□□□ 1.35
PRDM11-204ENST00000530656 UNC13AQ9UPW8 1703 aa23.19■■□□□ 1.3
PRDM11-204ENST00000530656 SUPT5HO00267 1087 aaKnown RBP23.13■■□□□ 1.29
PRDM11-204ENST00000530656 PABPN1Q86U42 306 aaKnown RBP eCLIP23■■□□□ 1.27
PRDM11-204ENST00000530656 BICRAQ9NZM4 1560 aa22.99■■□□□ 1.27
PRDM11-204ENST00000530656 RSF1Q96T23 1441 aaPredicted RBP22.8■■□□□ 1.24
PRDM11-204ENST00000530656 CECR2Q9BXF3 1484 aa22.71■■□□□ 1.23
PRDM11-204ENST00000530656 BAZ1AQ9NRL2 1556 aaPredicted RBP22.71■■□□□ 1.23
PRDM11-204ENST00000530656 MROH2BQ7Z745 1585 aa22.63■■□□□ 1.21
PRDM11-204ENST00000530656 SMARCA4P51532 1647 aa22.55■■□□□ 1.2
PRDM11-204ENST00000530656 WIZO95785 1651 aa22.46■■□□□ 1.19
PRDM11-204ENST00000530656 TOP2AP11388 1531 aaKnown RBP22.32■■□□□ 1.16
PRDM11-204ENST00000530656 EIF4G1Q04637 1599 aaKnown RBP22.31■■□□□ 1.16
PRDM11-204ENST00000530656 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
PRDM11-204ENST00000530656 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
PRDM11-204ENST00000530656 SMARCA2P51531 1590 aa22.18■■□□□ 1.14
PRDM11-204ENST00000530656 CC2D2AQ9P2K1 1620 aa22.12■■□□□ 1.13
PRDM11-204ENST00000530656 ATAD2BQ9ULI0 1458 aa22.11■■□□□ 1.13
PRDM11-204ENST00000530656 DNAJC5BQ9UF47 199 aa22.11■■□□□ 1.13
PRDM11-204ENST00000530656 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
PRDM11-204ENST00000530656 CCDC88BA6NC98 1476 aa22.02■■□□□ 1.12
PRDM11-204ENST00000530656 HMGXB3Q12766 1538 aa21.95■■□□□ 1.1
PRDM11-204ENST00000530656 NCAPD3P42695 1498 aa21.95■■□□□ 1.1
PRDM11-204ENST00000530656 TRIM41Q8WV44 630 aa21.82■■□□□ 1.08
PRDM11-204ENST00000530656 ABCC8Q09428 1581 aa21.58■■□□□ 1.04
PRDM11-204ENST00000530656 WRNQ14191 1432 aaPredicted RBP eCLIP21.5■■□□□ 1.03
PRDM11-204ENST00000530656 CFTRP13569 1480 aa21.47■■□□□ 1.03
PRDM11-204ENST00000530656 PRDM2Q13029 1718 aa21.44■■□□□ 1.02
PRDM11-204ENST00000530656 EEA1Q15075 1411 aa21.39■■□□□ 1.01
PRDM11-204ENST00000530656 SYNJ1O43426 1573 aa21.36■■□□□ 1.01
PRDM11-204ENST00000530656 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
PRDM11-204ENST00000530656 NESP48681 1621 aa21.33■■□□□ 1.01
PRDM11-204ENST00000530656 LOC105371045A0A1W2PR82 267 aa21.33■■□□□ 1
PRDM11-204ENST00000530656 TOP2BQ02880 1626 aa21.33■■□□□ 1
PRDM11-204ENST00000530656 FAM9AQ8IZU1 332 aaPredicted RBP21.32■■□□□ 1
PRDM11-204ENST00000530656 BIVM-ERCC5R4GMW8 1640 aa21.31■■□□□ 1
PRDM11-204ENST00000530656 LAMC3Q9Y6N6 1575 aa21.25■□□□□ 0.99
PRDM11-204ENST00000530656 SOGA1O94964 1423 aa21.2■□□□□ 0.98
PRDM11-204ENST00000530656 CUX1P39880 1505 aa21.18■□□□□ 0.98
PRDM11-204ENST00000530656 FANCD2Q9BXW9 1451 aa21.12■□□□□ 0.97
PRDM11-204ENST00000530656 CSRNP3Q8WYN3 585 aa21.12■□□□□ 0.97
PRDM11-204ENST00000530656 PDS5BQ9NTI5 1447 aa21.11■□□□□ 0.97
PRDM11-204ENST00000530656 RUSC2Q8N2Y8 1516 aa21.07■□□□□ 0.96
PRDM11-204ENST00000530656 KIF21AQ7Z4S6 1674 aa21.05■□□□□ 0.96
PRDM11-204ENST00000530656 KIF21BO75037 1637 aa21.04■□□□□ 0.96
PRDM11-204ENST00000530656 GOLGA3Q08378 1498 aa21.04■□□□□ 0.96
PRDM11-204ENST00000530656 CEP164Q9UPV0 1460 aa21.03■□□□□ 0.96
PRDM11-204ENST00000530656 DNMBPQ6XZF7 1577 aa21■□□□□ 0.95
PRDM11-204ENST00000530656 ERCC6Q03468 1493 aa20.99■□□□□ 0.95
PRDM11-204ENST00000530656 TNIKQ9UKE5 1360 aa20.98■□□□□ 0.95
PRDM11-204ENST00000530656 KIF27Q86VH2 1401 aa20.98■□□□□ 0.95
PRDM11-204ENST00000530656 EHMT2Q96KQ7 1210 aa20.94■□□□□ 0.94
PRDM11-204ENST00000530656 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
PRDM11-204ENST00000530656 TOPBP1Q92547 1522 aa20.91■□□□□ 0.94
PRDM11-204ENST00000530656 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.93
PRDM11-204ENST00000530656 URB2Q14146 1524 aaKnown RBP20.87■□□□□ 0.93
PRDM11-204ENST00000530656 MRC2Q9UBG0 1479 aa20.86■□□□□ 0.93
PRDM11-204ENST00000530656 UBTFP17480 764 aaKnown RBP20.86■□□□□ 0.93
PRDM11-204ENST00000530656 CEP162Q5TB80 1403 aa20.86■□□□□ 0.93
PRDM11-204ENST00000530656 CUX2O14529 1486 aa20.84■□□□□ 0.93
PRDM11-204ENST00000530656 PRXQ9BXM0 1461 aa20.84■□□□□ 0.93
PRDM11-204ENST00000530656 THOC2Q8NI27 1593 aaKnown RBP20.83■□□□□ 0.92
PRDM11-204ENST00000530656 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
PRDM11-204ENST00000530656 RAPGEF2Q9Y4G8 1499 aa20.79■□□□□ 0.92
PRDM11-204ENST00000530656 ABCA10Q8WWZ4 1543 aa20.79■□□□□ 0.92
PRDM11-204ENST00000530656 WDR62O43379 1518 aa20.77■□□□□ 0.92
PRDM11-204ENST00000530656 WDR97A6NE52 1622 aa20.7■□□□□ 0.9
PRDM11-204ENST00000530656 IGF1RP08069 1367 aa20.69■□□□□ 0.9
PRDM11-204ENST00000530656 RAD54L2Q9Y4B4 1467 aa20.68■□□□□ 0.9
PRDM11-204ENST00000530656 CLIP1P30622 1438 aa20.67■□□□□ 0.9
PRDM11-204ENST00000530656 TRIM26Q12899 539 aaPredicted RBP20.64■□□□□ 0.9
PRDM11-204ENST00000530656 CUL7Q14999 1698 aa20.64■□□□□ 0.89
PRDM11-204ENST00000530656 CARMIL1Q5VZK9 1371 aa20.62■□□□□ 0.89
PRDM11-204ENST00000530656 ABCA5Q8WWZ7 1642 aa20.6■□□□□ 0.89
PRDM11-204ENST00000530656 PCGF6Q9BYE7 350 aa20.58■□□□□ 0.89
PRDM11-204ENST00000530656 TARBP1Q13395 1621 aaKnown RBP20.57■□□□□ 0.88
PRDM11-204ENST00000530656 GAPVD1Q14C86 1478 aa20.54■□□□□ 0.88
PRDM11-204ENST00000530656 IFT140Q96RY7 1462 aa20.53■□□□□ 0.88
PRDM11-204ENST00000530656 VPS8Q8N3P4 1428 aa20.53■□□□□ 0.88
PRDM11-204ENST00000530656 TDRD9Q8NDG6 1382 aaKnown RBP20.47■□□□□ 0.87
PRDM11-204ENST00000530656 ZNF608Q9ULD9 1512 aaPredicted RBP20.47■□□□□ 0.87
PRDM11-204ENST00000530656 PBRM1Q86U86 1689 aa20.43■□□□□ 0.86
PRDM11-204ENST00000530656 AQRO60306 1485 aaKnown RBP eCLIP20.42■□□□□ 0.86
PRDM11-204ENST00000530656 ARAP1Q96P48 1450 aa20.41■□□□□ 0.86
PRDM11-204ENST00000530656 CTTNBP2Q8WZ74 1663 aa20.4■□□□□ 0.86
PRDM11-204ENST00000530656 GRIN2BQ13224 1484 aa20.38■□□□□ 0.85
PRDM11-204ENST00000530656 ARHGAP35Q9NRY4 1499 aa20.37■□□□□ 0.85
PRDM11-204ENST00000530656 RANGAP1P46060 587 aaPredicted RBP20.37■□□□□ 0.85
PRDM11-204ENST00000530656 APLP2Q06481 763 aa20.37■□□□□ 0.85
PRDM11-204ENST00000530656 EFCAB5A4FU69 1503 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms