RNA–Protein interactions for RNA: ENST00000530562.5

XRRA1-213, Transcript of X-ray radiation resistance associated 1, humanhuman

TSL 2

Gene XRRA1, Length 2,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRRA1-213ENST00000530562 NISCHQ9Y2I1 1504 aa28.48■■■□□ 2.15
XRRA1-213ENST00000530562 CCDC180Q9P1Z9 1646 aa24.68■■□□□ 1.54
XRRA1-213ENST00000530562 ZCCHC6Q5VYS8 1495 aaKnown RBP23.94■■□□□ 1.42
XRRA1-213ENST00000530562 DCAF8L2P0C7V8 631 aa23.68■■□□□ 1.38
XRRA1-213ENST00000530562 SHROOM4Q9ULL8 1493 aa23.53■■□□□ 1.36
XRRA1-213ENST00000530562 DCAF1Q9Y4B6 1507 aa23.45■■□□□ 1.34
XRRA1-213ENST00000530562 ABCC9O60706 1549 aa23.41■■□□□ 1.34
XRRA1-213ENST00000530562 MYO15BQ96JP2 1530 aa23.1■■□□□ 1.29
XRRA1-213ENST00000530562 NACADO15069 1562 aa22.99■■□□□ 1.27
XRRA1-213ENST00000530562 SCRIBQ14160 1630 aa22.87■■□□□ 1.25
XRRA1-213ENST00000530562 RB1CC1Q8TDY2 1594 aa22.78■■□□□ 1.24
XRRA1-213ENST00000530562 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
XRRA1-213ENST00000530562 UNC13AQ9UPW8 1703 aa22.36■■□□□ 1.17
XRRA1-213ENST00000530562 CECR2Q9BXF3 1484 aa22.19■■□□□ 1.14
XRRA1-213ENST00000530562 RSF1Q96T23 1441 aaPredicted RBP22.18■■□□□ 1.14
XRRA1-213ENST00000530562 PABPN1Q86U42 306 aaKnown RBP eCLIP22.16■■□□□ 1.14
XRRA1-213ENST00000530562 BICRAQ9NZM4 1560 aa22.13■■□□□ 1.13
XRRA1-213ENST00000530562 MROH2BQ7Z745 1585 aa22.06■■□□□ 1.12
XRRA1-213ENST00000530562 BAZ1AQ9NRL2 1556 aaPredicted RBP21.96■■□□□ 1.11
XRRA1-213ENST00000530562 WIZO95785 1651 aa21.89■■□□□ 1.1
XRRA1-213ENST00000530562 SMARCA4P51532 1647 aa21.86■■□□□ 1.09
XRRA1-213ENST00000530562 CHIC1Q5VXU3 224 aa21.7■■□□□ 1.06
XRRA1-213ENST00000530562 TOP2AP11388 1531 aaKnown RBP21.6■■□□□ 1.05
XRRA1-213ENST00000530562 PEG3Q9GZU2 1588 aa21.53■■□□□ 1.04
XRRA1-213ENST00000530562 ATAD2BQ9ULI0 1458 aa21.49■■□□□ 1.03
XRRA1-213ENST00000530562 EIF4G1Q04637 1599 aaKnown RBP21.46■■□□□ 1.03
XRRA1-213ENST00000530562 SMARCA2P51531 1590 aa21.44■■□□□ 1.02
XRRA1-213ENST00000530562 CCDC88BA6NC98 1476 aa21.43■■□□□ 1.02
XRRA1-213ENST00000530562 BAZ1BQ9UIG0 1483 aaKnown RBP21.39■■□□□ 1.01
XRRA1-213ENST00000530562 TRIM41Q8WV44 630 aa21.25■□□□□ 0.99
XRRA1-213ENST00000530562 NCAPD3P42695 1498 aa21.24■□□□□ 0.99
XRRA1-213ENST00000530562 HMGXB3Q12766 1538 aa21.2■□□□□ 0.98
XRRA1-213ENST00000530562 CC2D2AQ9P2K1 1620 aa21.13■□□□□ 0.97
XRRA1-213ENST00000530562 ABCC8Q09428 1581 aa21.08■□□□□ 0.97
XRRA1-213ENST00000530562 FAM9AQ8IZU1 332 aaPredicted RBP20.96■□□□□ 0.95
XRRA1-213ENST00000530562 LOC105371045A0A1W2PR82 267 aa20.96■□□□□ 0.95
XRRA1-213ENST00000530562 WRNQ14191 1432 aaPredicted RBP eCLIP20.88■□□□□ 0.93
XRRA1-213ENST00000530562 CFTRP13569 1480 aa20.83■□□□□ 0.92
XRRA1-213ENST00000530562 SYNJ1O43426 1573 aa20.79■□□□□ 0.92
XRRA1-213ENST00000530562 EHMT2Q96KQ7 1210 aa20.76■□□□□ 0.91
XRRA1-213ENST00000530562 CADPSQ9ULU8 1353 aa20.75■□□□□ 0.91
XRRA1-213ENST00000530562 SOGA1O94964 1423 aa20.71■□□□□ 0.91
XRRA1-213ENST00000530562 DNAJC5BQ9UF47 199 aa20.69■□□□□ 0.9
XRRA1-213ENST00000530562 PRDM2Q13029 1718 aa20.66■□□□□ 0.9
XRRA1-213ENST00000530562 TOP2BQ02880 1626 aa20.65■□□□□ 0.9
XRRA1-213ENST00000530562 RUSC2Q8N2Y8 1516 aa20.64■□□□□ 0.89
XRRA1-213ENST00000530562 CUX1P39880 1505 aa20.6■□□□□ 0.89
XRRA1-213ENST00000530562 NESP48681 1621 aa20.6■□□□□ 0.89
XRRA1-213ENST00000530562 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
XRRA1-213ENST00000530562 EEA1Q15075 1411 aa20.57■□□□□ 0.88
XRRA1-213ENST00000530562 CSRNP3Q8WYN3 585 aa20.54■□□□□ 0.88
XRRA1-213ENST00000530562 FANCD2Q9BXW9 1451 aa20.54■□□□□ 0.88
XRRA1-213ENST00000530562 LAMC3Q9Y6N6 1575 aa20.49■□□□□ 0.87
XRRA1-213ENST00000530562 CEP164Q9UPV0 1460 aa20.38■□□□□ 0.85
XRRA1-213ENST00000530562 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
XRRA1-213ENST00000530562 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
XRRA1-213ENST00000530562 UBTFP17480 764 aaKnown RBP20.36■□□□□ 0.85
XRRA1-213ENST00000530562 GOLGA3Q08378 1498 aa20.35■□□□□ 0.85
XRRA1-213ENST00000530562 DNMBPQ6XZF7 1577 aa20.33■□□□□ 0.85
XRRA1-213ENST00000530562 KIF27Q86VH2 1401 aa20.32■□□□□ 0.84
XRRA1-213ENST00000530562 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
XRRA1-213ENST00000530562 KIF21BO75037 1637 aa20.31■□□□□ 0.84
XRRA1-213ENST00000530562 TNIKQ9UKE5 1360 aa20.3■□□□□ 0.84
XRRA1-213ENST00000530562 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
XRRA1-213ENST00000530562 CUX2O14529 1486 aa20.28■□□□□ 0.84
XRRA1-213ENST00000530562 URB2Q14146 1524 aaKnown RBP20.27■□□□□ 0.84
XRRA1-213ENST00000530562 RAPGEF2Q9Y4G8 1499 aa20.27■□□□□ 0.84
XRRA1-213ENST00000530562 CEP162Q5TB80 1403 aa20.25■□□□□ 0.83
XRRA1-213ENST00000530562 POLA1P09884 1462 aaPredicted RBP20.25■□□□□ 0.83
XRRA1-213ENST00000530562 RAD54L2Q9Y4B4 1467 aa20.23■□□□□ 0.83
XRRA1-213ENST00000530562 PRXQ9BXM0 1461 aa20.2■□□□□ 0.82
XRRA1-213ENST00000530562 ERICH3Q5RHP9 1530 aa20.15■□□□□ 0.82
XRRA1-213ENST00000530562 IGF1RP08069 1367 aa20.14■□□□□ 0.81
XRRA1-213ENST00000530562 ABCA10Q8WWZ4 1543 aa20.14■□□□□ 0.81
XRRA1-213ENST00000530562 PCGF6Q9BYE7 350 aa20.14■□□□□ 0.81
XRRA1-213ENST00000530562 RANGAP1P46060 587 aaPredicted RBP20.1■□□□□ 0.81
XRRA1-213ENST00000530562 MRC2Q9UBG0 1479 aa20.09■□□□□ 0.81
XRRA1-213ENST00000530562 CLIP1P30622 1438 aa20.06■□□□□ 0.8
XRRA1-213ENST00000530562 CARMIL1Q5VZK9 1371 aa20.05■□□□□ 0.8
XRRA1-213ENST00000530562 WDR97A6NE52 1622 aa20.04■□□□□ 0.8
XRRA1-213ENST00000530562 PPARGC1BQ86YN6 1023 aaKnown RBP20.04■□□□□ 0.8
XRRA1-213ENST00000530562 ERCC6Q03468 1493 aa20.04■□□□□ 0.8
XRRA1-213ENST00000530562 TDRD9Q8NDG6 1382 aaKnown RBP20.03■□□□□ 0.8
XRRA1-213ENST00000530562 TRIM26Q12899 539 aaPredicted RBP20.01■□□□□ 0.79
XRRA1-213ENST00000530562 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
XRRA1-213ENST00000530562 WDR62O43379 1518 aa19.96■□□□□ 0.79
XRRA1-213ENST00000530562 ABCA5Q8WWZ7 1642 aa19.96■□□□□ 0.79
XRRA1-213ENST00000530562 GAPVD1Q14C86 1478 aa19.96■□□□□ 0.79
XRRA1-213ENST00000530562 CUL7Q14999 1698 aa19.91■□□□□ 0.78
XRRA1-213ENST00000530562 THOC2Q8NI27 1593 aaKnown RBP19.89■□□□□ 0.77
XRRA1-213ENST00000530562 VPS8Q8N3P4 1428 aa19.88■□□□□ 0.77
XRRA1-213ENST00000530562 TTBK1Q5TCY1 1321 aaPredicted RBP19.88■□□□□ 0.77
XRRA1-213ENST00000530562 AQRO60306 1485 aaKnown RBP eCLIP19.87■□□□□ 0.77
XRRA1-213ENST00000530562 IFT140Q96RY7 1462 aa19.85■□□□□ 0.77
XRRA1-213ENST00000530562 ARAP1Q96P48 1450 aa19.84■□□□□ 0.77
XRRA1-213ENST00000530562 ZNF608Q9ULD9 1512 aaPredicted RBP19.83■□□□□ 0.76
XRRA1-213ENST00000530562 ARHGAP35Q9NRY4 1499 aa19.81■□□□□ 0.76
XRRA1-213ENST00000530562 PBRM1Q86U86 1689 aa19.8■□□□□ 0.76
XRRA1-213ENST00000530562 GRIN2BQ13224 1484 aa19.76■□□□□ 0.75
XRRA1-213ENST00000530562 APLP2Q06481 763 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms