RNA–Protein interactions for RNA: ENST00000530487.5

CR1-211, Transcript of complement C3b/C4b receptor 1 (Knops blood group), humanhuman

TSL 2

Gene CR1, Length 1,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR1-211ENST00000530487 NISCHQ9Y2I1 1504 aa31.19■■■□□ 2.58
CR1-211ENST00000530487 CCDC180Q9P1Z9 1646 aa27.65■■■□□ 2.02
CR1-211ENST00000530487 ABCC9O60706 1549 aa26.29■■□□□ 1.8
CR1-211ENST00000530487 ZCCHC6Q5VYS8 1495 aaKnown RBP26.16■■□□□ 1.78
CR1-211ENST00000530487 DCAF1Q9Y4B6 1507 aa25.9■■□□□ 1.74
CR1-211ENST00000530487 MYO15BQ96JP2 1530 aa25.81■■□□□ 1.72
CR1-211ENST00000530487 NACADO15069 1562 aa25.73■■□□□ 1.71
CR1-211ENST00000530487 RB1CC1Q8TDY2 1594 aa25.62■■□□□ 1.69
CR1-211ENST00000530487 DCAF8L2P0C7V8 631 aa25.41■■□□□ 1.66
CR1-211ENST00000530487 UNC13AQ9UPW8 1703 aa25.29■■□□□ 1.64
CR1-211ENST00000530487 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
CR1-211ENST00000530487 BICRAQ9NZM4 1560 aa24.93■■□□□ 1.58
CR1-211ENST00000530487 SHROOM4Q9ULL8 1493 aa24.75■■□□□ 1.55
CR1-211ENST00000530487 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.51
CR1-211ENST00000530487 CECR2Q9BXF3 1484 aa24.2■■□□□ 1.47
CR1-211ENST00000530487 SMARCA4P51532 1647 aa24.16■■□□□ 1.46
CR1-211ENST00000530487 EIF4G1Q04637 1599 aaKnown RBP24.16■■□□□ 1.46
CR1-211ENST00000530487 BAZ1AQ9NRL2 1556 aaPredicted RBP24.13■■□□□ 1.45
CR1-211ENST00000530487 MROH2BQ7Z745 1585 aa24.04■■□□□ 1.44
CR1-211ENST00000530487 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.43
CR1-211ENST00000530487 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
CR1-211ENST00000530487 RSF1Q96T23 1441 aaPredicted RBP23.9■■□□□ 1.42
CR1-211ENST00000530487 WIZO95785 1651 aa23.86■■□□□ 1.41
CR1-211ENST00000530487 SMARCA2P51531 1590 aa23.81■■□□□ 1.4
CR1-211ENST00000530487 ATAD2BQ9ULI0 1458 aa23.78■■□□□ 1.4
CR1-211ENST00000530487 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
CR1-211ENST00000530487 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
CR1-211ENST00000530487 TOP2AP11388 1531 aaKnown RBP23.63■■□□□ 1.37
CR1-211ENST00000530487 BAZ1BQ9UIG0 1483 aaKnown RBP23.6■■□□□ 1.37
CR1-211ENST00000530487 DNAJC5BQ9UF47 199 aa23.58■■□□□ 1.37
CR1-211ENST00000530487 SUPT5HO00267 1087 aaKnown RBP23.43■■□□□ 1.34
CR1-211ENST00000530487 CCDC88BA6NC98 1476 aa23.25■■□□□ 1.31
CR1-211ENST00000530487 PRDM2Q13029 1718 aa23.15■■□□□ 1.3
CR1-211ENST00000530487 LAMC3Q9Y6N6 1575 aa23.04■■□□□ 1.28
CR1-211ENST00000530487 CFTRP13569 1480 aa23.01■■□□□ 1.27
CR1-211ENST00000530487 NESP48681 1621 aa22.97■■□□□ 1.27
CR1-211ENST00000530487 CADPSQ9ULU8 1353 aa22.95■■□□□ 1.26
CR1-211ENST00000530487 KIF21AQ7Z4S6 1674 aa22.87■■□□□ 1.25
CR1-211ENST00000530487 FANCD2Q9BXW9 1451 aa22.73■■□□□ 1.23
CR1-211ENST00000530487 PDS5BQ9NTI5 1447 aa22.71■■□□□ 1.23
CR1-211ENST00000530487 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
CR1-211ENST00000530487 CEP164Q9UPV0 1460 aa22.66■■□□□ 1.22
CR1-211ENST00000530487 ABCC8Q09428 1581 aa22.63■■□□□ 1.21
CR1-211ENST00000530487 BIVM-ERCC5R4GMW8 1640 aa22.58■■□□□ 1.21
CR1-211ENST00000530487 ERCC6Q03468 1493 aa22.56■■□□□ 1.2
CR1-211ENST00000530487 SYNJ1O43426 1573 aa22.55■■□□□ 1.2
CR1-211ENST00000530487 DNMBPQ6XZF7 1577 aa22.55■■□□□ 1.2
CR1-211ENST00000530487 MRC2Q9UBG0 1479 aa22.54■■□□□ 1.2
CR1-211ENST00000530487 WDR62O43379 1518 aa22.54■■□□□ 1.2
CR1-211ENST00000530487 CUX1P39880 1505 aa22.54■■□□□ 1.2
CR1-211ENST00000530487 URB2Q14146 1524 aaKnown RBP22.54■■□□□ 1.2
CR1-211ENST00000530487 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
CR1-211ENST00000530487 WRNQ14191 1432 aaPredicted RBP eCLIP22.49■■□□□ 1.19
CR1-211ENST00000530487 TOPBP1Q92547 1522 aa22.48■■□□□ 1.19
CR1-211ENST00000530487 WDR97A6NE52 1622 aa22.35■■□□□ 1.17
CR1-211ENST00000530487 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
CR1-211ENST00000530487 POLA1P09884 1462 aaPredicted RBP22.33■■□□□ 1.16
CR1-211ENST00000530487 TARBP1Q13395 1621 aaKnown RBP22.29■■□□□ 1.16
CR1-211ENST00000530487 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
CR1-211ENST00000530487 CUX2O14529 1486 aa22.28■■□□□ 1.16
CR1-211ENST00000530487 ABCA10Q8WWZ4 1543 aa22.17■■□□□ 1.14
CR1-211ENST00000530487 IFT140Q96RY7 1462 aa22.16■■□□□ 1.14
CR1-211ENST00000530487 RAD54L2Q9Y4B4 1467 aa22.16■■□□□ 1.14
CR1-211ENST00000530487 ABCA5Q8WWZ7 1642 aa22.15■■□□□ 1.14
CR1-211ENST00000530487 TRIM41Q8WV44 630 aa22.11■■□□□ 1.13
CR1-211ENST00000530487 SOGA1O94964 1423 aa22.11■■□□□ 1.13
CR1-211ENST00000530487 EIF4G3O43432 1585 aaKnown RBP22.09■■□□□ 1.13
CR1-211ENST00000530487 PBRM1Q86U86 1689 aa22.07■■□□□ 1.12
CR1-211ENST00000530487 ZNF608Q9ULD9 1512 aaPredicted RBP22.04■■□□□ 1.12
CR1-211ENST00000530487 RUSC2Q8N2Y8 1516 aa21.97■■□□□ 1.11
CR1-211ENST00000530487 KIF27Q86VH2 1401 aa21.94■■□□□ 1.1
CR1-211ENST00000530487 GAPVD1Q14C86 1478 aa21.93■■□□□ 1.1
CR1-211ENST00000530487 ERICH3Q5RHP9 1530 aa21.92■■□□□ 1.1
CR1-211ENST00000530487 AQRO60306 1485 aaKnown RBP eCLIP21.91■■□□□ 1.1
CR1-211ENST00000530487 EEA1Q15075 1411 aa21.9■■□□□ 1.1
CR1-211ENST00000530487 TDRD9Q8NDG6 1382 aaKnown RBP21.9■■□□□ 1.1
CR1-211ENST00000530487 CUL7Q14999 1698 aa21.88■■□□□ 1.09
CR1-211ENST00000530487 ADAMTS12P58397 1594 aa21.87■■□□□ 1.09
CR1-211ENST00000530487 GRIN2BQ13224 1484 aa21.86■■□□□ 1.09
CR1-211ENST00000530487 SNAPC4Q5SXM2 1469 aa21.79■■□□□ 1.08
CR1-211ENST00000530487 MAGI1Q96QZ7 1491 aaPredicted RBP21.79■■□□□ 1.08
CR1-211ENST00000530487 KIF21BO75037 1637 aa21.79■■□□□ 1.08
CR1-211ENST00000530487 IGF1RP08069 1367 aa21.77■■□□□ 1.08
CR1-211ENST00000530487 CHD1O14646 1710 aa21.76■■□□□ 1.07
CR1-211ENST00000530487 PRXQ9BXM0 1461 aa21.75■■□□□ 1.07
CR1-211ENST00000530487 FHAD1B1AJZ9 1412 aa21.69■■□□□ 1.06
CR1-211ENST00000530487 SYNJ2O15056 1496 aa21.68■■□□□ 1.06
CR1-211ENST00000530487 CSRNP3Q8WYN3 585 aa21.65■■□□□ 1.06
CR1-211ENST00000530487 CARMIL1Q5VZK9 1371 aa21.63■■□□□ 1.05
CR1-211ENST00000530487 GRIN2AQ12879 1464 aa21.63■■□□□ 1.05
CR1-211ENST00000530487 RAPGEF2Q9Y4G8 1499 aa21.63■■□□□ 1.05
CR1-211ENST00000530487 CTTNBP2Q8WZ74 1663 aa21.63■■□□□ 1.05
CR1-211ENST00000530487 FAM9AQ8IZU1 332 aaPredicted RBP21.61■■□□□ 1.05
CR1-211ENST00000530487 CEP170Q5SW79 1584 aa21.57■■□□□ 1.04
CR1-211ENST00000530487 GOLGA3Q08378 1498 aa21.57■■□□□ 1.04
CR1-211ENST00000530487 NUP160Q12769 1436 aa21.53■■□□□ 1.04
CR1-211ENST00000530487 CLASP1Q7Z460 1538 aa21.49■■□□□ 1.03
CR1-211ENST00000530487 IQGAP2Q13576 1575 aa21.43■■□□□ 1.02
CR1-211ENST00000530487 SHROOM2Q13796 1616 aa21.43■■□□□ 1.02
CR1-211ENST00000530487 CHMP7Q8WUX9 453 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms