RNA–Protein interactions for RNA: ENST00000530396.1

NCAPD3-208, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 3

Gene NCAPD3, Length 1,521 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-208ENST00000530396 NISCHQ9Y2I1 1504 aa22.64■■□□□ 1.21
NCAPD3-208ENST00000530396 AEBP2Q6ZN18 517 aaPredicted RBP20.63■□□□□ 0.89
NCAPD3-208ENST00000530396 ABCC9O60706 1549 aa20.44■□□□□ 0.86
NCAPD3-208ENST00000530396 CCDC180Q9P1Z9 1646 aa20.39■□□□□ 0.85
NCAPD3-208ENST00000530396 CHIC1Q5VXU3 224 aa19.66■□□□□ 0.74
NCAPD3-208ENST00000530396 RB1CC1Q8TDY2 1594 aa19.45■□□□□ 0.7
NCAPD3-208ENST00000530396 NACADO15069 1562 aa19.3■□□□□ 0.68
NCAPD3-208ENST00000530396 DNAJC5BQ9UF47 199 aa19.25■□□□□ 0.67
NCAPD3-208ENST00000530396 DCAF8L2P0C7V8 631 aa19.09■□□□□ 0.65
NCAPD3-208ENST00000530396 MYO15BQ96JP2 1530 aa19.02■□□□□ 0.64
NCAPD3-208ENST00000530396 PABPN1Q86U42 306 aaKnown RBP eCLIP18.99■□□□□ 0.63
NCAPD3-208ENST00000530396 UNC13AQ9UPW8 1703 aa18.98■□□□□ 0.63
NCAPD3-208ENST00000530396 BICRAQ9NZM4 1560 aa18.87■□□□□ 0.61
NCAPD3-208ENST00000530396 ZCCHC6Q5VYS8 1495 aaKnown RBP18.75■□□□□ 0.59
NCAPD3-208ENST00000530396 DCAF1Q9Y4B6 1507 aa18.73■□□□□ 0.59
NCAPD3-208ENST00000530396 SHROOM4Q9ULL8 1493 aa18.67■□□□□ 0.58
NCAPD3-208ENST00000530396 SCRIBQ14160 1630 aa18.53■□□□□ 0.56
NCAPD3-208ENST00000530396 CC2D2AQ9P2K1 1620 aa18.48■□□□□ 0.55
NCAPD3-208ENST00000530396 CECR2Q9BXF3 1484 aa18.44■□□□□ 0.54
NCAPD3-208ENST00000530396 EIF4G1Q04637 1599 aaKnown RBP18.42■□□□□ 0.54
NCAPD3-208ENST00000530396 NCAPD3P42695 1498 aa17.81■□□□□ 0.44
NCAPD3-208ENST00000530396 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
NCAPD3-208ENST00000530396 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
NCAPD3-208ENST00000530396 CUX2O14529 1486 aa17.71■□□□□ 0.43
NCAPD3-208ENST00000530396 SMARCA2P51531 1590 aa17.69■□□□□ 0.42
NCAPD3-208ENST00000530396 SMARCA4P51532 1647 aa17.69■□□□□ 0.42
NCAPD3-208ENST00000530396 HMGXB3Q12766 1538 aa17.68■□□□□ 0.42
NCAPD3-208ENST00000530396 ERCC6Q03468 1493 aa17.68■□□□□ 0.42
NCAPD3-208ENST00000530396 BAZ1AQ9NRL2 1556 aaPredicted RBP17.59■□□□□ 0.41
NCAPD3-208ENST00000530396 BAZ1BQ9UIG0 1483 aaKnown RBP17.55■□□□□ 0.4
NCAPD3-208ENST00000530396 PEG3Q9GZU2 1588 aa17.54■□□□□ 0.4
NCAPD3-208ENST00000530396 NESP48681 1621 aa17.53■□□□□ 0.4
NCAPD3-208ENST00000530396 SENP3Q9H4L4 574 aaPredicted RBP17.46■□□□□ 0.39
NCAPD3-208ENST00000530396 MROH2BQ7Z745 1585 aa17.43■□□□□ 0.38
NCAPD3-208ENST00000530396 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
NCAPD3-208ENST00000530396 THOC2Q8NI27 1593 aaKnown RBP17.4■□□□□ 0.38
NCAPD3-208ENST00000530396 PDS5BQ9NTI5 1447 aa17.33■□□□□ 0.37
NCAPD3-208ENST00000530396 KIF21AQ7Z4S6 1674 aa17.31■□□□□ 0.36
NCAPD3-208ENST00000530396 PHF23Q9BUL5 403 aaPredicted RBP17.3■□□□□ 0.36
NCAPD3-208ENST00000530396 CADPSQ9ULU8 1353 aa17.25■□□□□ 0.35
NCAPD3-208ENST00000530396 WIZO95785 1651 aa17.21■□□□□ 0.35
NCAPD3-208ENST00000530396 MRC2Q9UBG0 1479 aa17.18■□□□□ 0.34
NCAPD3-208ENST00000530396 WDR62O43379 1518 aa17.15■□□□□ 0.34
NCAPD3-208ENST00000530396 CEP164Q9UPV0 1460 aa17.09■□□□□ 0.33
NCAPD3-208ENST00000530396 FANCD2Q9BXW9 1451 aa17.06■□□□□ 0.32
NCAPD3-208ENST00000530396 CFTRP13569 1480 aa17.04■□□□□ 0.32
NCAPD3-208ENST00000530396 RSF1Q96T23 1441 aaPredicted RBP17.03■□□□□ 0.32
NCAPD3-208ENST00000530396 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
NCAPD3-208ENST00000530396 TRIM41Q8WV44 630 aa16.92■□□□□ 0.3
NCAPD3-208ENST00000530396 URB2Q14146 1524 aaKnown RBP16.92■□□□□ 0.3
NCAPD3-208ENST00000530396 PRDM2Q13029 1718 aa16.87■□□□□ 0.29
NCAPD3-208ENST00000530396 OSCARQ8IYS5 282 aa16.86■□□□□ 0.29
NCAPD3-208ENST00000530396 CCDC88BA6NC98 1476 aa16.8■□□□□ 0.28
NCAPD3-208ENST00000530396 IFT140Q96RY7 1462 aa16.76■□□□□ 0.27
NCAPD3-208ENST00000530396 SUPT5HO00267 1087 aaKnown RBP16.74■□□□□ 0.27
NCAPD3-208ENST00000530396 TOPBP1Q92547 1522 aa16.72■□□□□ 0.27
NCAPD3-208ENST00000530396 ZNF608Q9ULD9 1512 aaPredicted RBP16.71■□□□□ 0.27
NCAPD3-208ENST00000530396 ABCC8Q09428 1581 aa16.7■□□□□ 0.26
NCAPD3-208ENST00000530396 DNMBPQ6XZF7 1577 aa16.66■□□□□ 0.26
NCAPD3-208ENST00000530396 POTEDQ86YR6 584 aa16.66■□□□□ 0.26
NCAPD3-208ENST00000530396 RIMBP3CA6NJZ7 1639 aa16.65■□□□□ 0.26
NCAPD3-208ENST00000530396 RIMBP3BA6NNM3 1639 aa16.65■□□□□ 0.26
NCAPD3-208ENST00000530396 RIMBP3Q9UFD9 1639 aa16.65■□□□□ 0.26
NCAPD3-208ENST00000530396 EIF4G3O43432 1585 aaKnown RBP16.64■□□□□ 0.25
NCAPD3-208ENST00000530396 ARHGEF11O15085 1522 aa16.59■□□□□ 0.25
NCAPD3-208ENST00000530396 TARBP1Q13395 1621 aaKnown RBP16.58■□□□□ 0.25
NCAPD3-208ENST00000530396 AQRO60306 1485 aaKnown RBP eCLIP16.54■□□□□ 0.246e-7■■■■□ 26.7
NCAPD3-208ENST00000530396 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
NCAPD3-208ENST00000530396 CHD1O14646 1710 aa16.52■□□□□ 0.24
NCAPD3-208ENST00000530396 RAD54L2Q9Y4B4 1467 aa16.46■□□□□ 0.23
NCAPD3-208ENST00000530396 SOGA1O94964 1423 aa16.46■□□□□ 0.23
NCAPD3-208ENST00000530396 WDR97A6NE52 1622 aa16.45■□□□□ 0.22
NCAPD3-208ENST00000530396 CYB5RLQ6IPT4 315 aa16.45■□□□□ 0.22
NCAPD3-208ENST00000530396 FBLN2P98095 1184 aa16.44■□□□□ 0.22
NCAPD3-208ENST00000530396 TDRD9Q8NDG6 1382 aaKnown RBP16.42■□□□□ 0.22
NCAPD3-208ENST00000530396 FGD5Q6ZNL6 1462 aa16.42■□□□□ 0.22
NCAPD3-208ENST00000530396 ARAP1Q96P48 1450 aa16.42■□□□□ 0.22
NCAPD3-208ENST00000530396 SNAPC4Q5SXM2 1469 aa16.39■□□□□ 0.21
NCAPD3-208ENST00000530396 CUX1P39880 1505 aa16.38■□□□□ 0.21
NCAPD3-208ENST00000530396 MAGI1Q96QZ7 1491 aaPredicted RBP16.36■□□□□ 0.21
NCAPD3-208ENST00000530396 CLASP1Q7Z460 1538 aa16.35■□□□□ 0.21
NCAPD3-208ENST00000530396 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
NCAPD3-208ENST00000530396 SYNJ1O43426 1573 aa16.33■□□□□ 0.2
NCAPD3-208ENST00000530396 CHMP7Q8WUX9 453 aaPredicted RBP16.33■□□□□ 0.2
NCAPD3-208ENST00000530396 FOXD1Q16676 465 aa16.32■□□□□ 0.2
NCAPD3-208ENST00000530396 SYNJ2O15056 1496 aa16.3■□□□□ 0.2
NCAPD3-208ENST00000530396 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
NCAPD3-208ENST00000530396 GAPVD1Q14C86 1478 aa16.26■□□□□ 0.19
NCAPD3-208ENST00000530396 PBRM1Q86U86 1689 aa16.26■□□□□ 0.19
NCAPD3-208ENST00000530396 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
NCAPD3-208ENST00000530396 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
NCAPD3-208ENST00000530396 WRNQ14191 1432 aaPredicted RBP eCLIP16.15■□□□□ 0.18
NCAPD3-208ENST00000530396 GRIN2AQ12879 1464 aa16.13■□□□□ 0.17
NCAPD3-208ENST00000530396 TOP2BQ02880 1626 aa16.11■□□□□ 0.17
NCAPD3-208ENST00000530396 BIVM-ERCC5R4GMW8 1640 aa16.11■□□□□ 0.17
NCAPD3-208ENST00000530396 ADAMTS12P58397 1594 aa16.11■□□□□ 0.17
NCAPD3-208ENST00000530396 NUP160Q12769 1436 aa16.09■□□□□ 0.17
NCAPD3-208ENST00000530396 CEP170Q5SW79 1584 aa16.07■□□□□ 0.16
NCAPD3-208ENST00000530396 FHAD1B1AJZ9 1412 aa16.06■□□□□ 0.16
NCAPD3-208ENST00000530396 ERCC6L2Q5T890 1561 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms