RNA–Protein interactions for RNA: ENST00000530381.1

PITPNM1-213, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

TSL 3

Gene PITPNM1, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-213ENST00000530381 NISCHQ9Y2I1 1504 aa32.8■■■□□ 2.84
PITPNM1-213ENST00000530381 ABCC9O60706 1549 aa29.76■■■□□ 2.35
PITPNM1-213ENST00000530381 CCDC180Q9P1Z9 1646 aa29.44■■■□□ 2.3
PITPNM1-213ENST00000530381 RB1CC1Q8TDY2 1594 aa28.22■■■□□ 2.11
PITPNM1-213ENST00000530381 DNAJC5BQ9UF47 199 aa28.16■■■□□ 2.1
PITPNM1-213ENST00000530381 NACADO15069 1562 aa27.99■■■□□ 2.07
PITPNM1-213ENST00000530381 DCAF8L2P0C7V8 631 aa27.9■■■□□ 2.06
PITPNM1-213ENST00000530381 PABPN1Q86U42 306 aaKnown RBP eCLIP27.73■■■□□ 2.03
PITPNM1-213ENST00000530381 MYO15BQ96JP2 1530 aa27.57■■■□□ 2
PITPNM1-213ENST00000530381 UNC13AQ9UPW8 1703 aa27.34■■□□□ 1.97
PITPNM1-213ENST00000530381 BICRAQ9NZM4 1560 aa27.34■■□□□ 1.97
PITPNM1-213ENST00000530381 ZCCHC6Q5VYS8 1495 aaKnown RBP27.12■■□□□ 1.93
PITPNM1-213ENST00000530381 DCAF1Q9Y4B6 1507 aa27.1■■□□□ 1.93
PITPNM1-213ENST00000530381 SHROOM4Q9ULL8 1493 aa27.07■■□□□ 1.92
PITPNM1-213ENST00000530381 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
PITPNM1-213ENST00000530381 SCRIBQ14160 1630 aa26.82■■□□□ 1.88
PITPNM1-213ENST00000530381 CC2D2AQ9P2K1 1620 aa26.82■■□□□ 1.88
PITPNM1-213ENST00000530381 EIF4G1Q04637 1599 aaKnown RBP26.72■■□□□ 1.87
PITPNM1-213ENST00000530381 DNAJC5Q9H3Z4 198 aa26.11■■□□□ 1.77
PITPNM1-213ENST00000530381 NCAPD3P42695 1498 aa25.89■■□□□ 1.73
PITPNM1-213ENST00000530381 CUX2O14529 1486 aa25.79■■□□□ 1.72
PITPNM1-213ENST00000530381 ERCC6Q03468 1493 aa25.76■■□□□ 1.71
PITPNM1-213ENST00000530381 ATAD2BQ9ULI0 1458 aa25.74■■□□□ 1.71
PITPNM1-213ENST00000530381 SMARCA2P51531 1590 aa25.65■■□□□ 1.7
PITPNM1-213ENST00000530381 HMGXB3Q12766 1538 aa25.61■■□□□ 1.69
PITPNM1-213ENST00000530381 SMARCA4P51532 1647 aa25.57■■□□□ 1.68
PITPNM1-213ENST00000530381 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
PITPNM1-213ENST00000530381 BAZ1BQ9UIG0 1483 aaKnown RBP25.47■■□□□ 1.67
PITPNM1-213ENST00000530381 NESP48681 1621 aa25.46■■□□□ 1.67
PITPNM1-213ENST00000530381 PEG3Q9GZU2 1588 aa25.36■■□□□ 1.65
PITPNM1-213ENST00000530381 LAMC3Q9Y6N6 1575 aa25.27■■□□□ 1.64
PITPNM1-213ENST00000530381 MROH2BQ7Z745 1585 aa25.24■■□□□ 1.63
PITPNM1-213ENST00000530381 PDS5BQ9NTI5 1447 aa25.23■■□□□ 1.63
PITPNM1-213ENST00000530381 THOC2Q8NI27 1593 aaKnown RBP25.19■■□□□ 1.62
PITPNM1-213ENST00000530381 CADPSQ9ULU8 1353 aa25.11■■□□□ 1.61
PITPNM1-213ENST00000530381 KIF21AQ7Z4S6 1674 aa25.01■■□□□ 1.59
PITPNM1-213ENST00000530381 MRC2Q9UBG0 1479 aa24.96■■□□□ 1.59
PITPNM1-213ENST00000530381 WDR62O43379 1518 aa24.87■■□□□ 1.57
PITPNM1-213ENST00000530381 WIZO95785 1651 aa24.85■■□□□ 1.57
PITPNM1-213ENST00000530381 TRIM41Q8WV44 630 aa24.83■■□□□ 1.57
PITPNM1-213ENST00000530381 CEP164Q9UPV0 1460 aa24.82■■□□□ 1.56
PITPNM1-213ENST00000530381 FANCD2Q9BXW9 1451 aa24.77■■□□□ 1.56
PITPNM1-213ENST00000530381 CFTRP13569 1480 aa24.74■■□□□ 1.55
PITPNM1-213ENST00000530381 RSF1Q96T23 1441 aaPredicted RBP24.69■■□□□ 1.54
PITPNM1-213ENST00000530381 OSCARQ8IYS5 282 aa24.66■■□□□ 1.54
PITPNM1-213ENST00000530381 TOP2AP11388 1531 aaKnown RBP24.6■■□□□ 1.53
PITPNM1-213ENST00000530381 URB2Q14146 1524 aaKnown RBP24.55■■□□□ 1.52
PITPNM1-213ENST00000530381 CCDC88BA6NC98 1476 aa24.36■■□□□ 1.49
PITPNM1-213ENST00000530381 IFT140Q96RY7 1462 aa24.36■■□□□ 1.49
PITPNM1-213ENST00000530381 ZNF608Q9ULD9 1512 aaPredicted RBP24.28■■□□□ 1.48
PITPNM1-213ENST00000530381 ABCC8Q09428 1581 aa24.26■■□□□ 1.47
PITPNM1-213ENST00000530381 TOPBP1Q92547 1522 aa24.25■■□□□ 1.47
PITPNM1-213ENST00000530381 PRDM2Q13029 1718 aa24.22■■□□□ 1.47
PITPNM1-213ENST00000530381 RIMBP3CA6NJZ7 1639 aa24.17■■□□□ 1.46
PITPNM1-213ENST00000530381 RIMBP3BA6NNM3 1639 aa24.17■■□□□ 1.46
PITPNM1-213ENST00000530381 RIMBP3Q9UFD9 1639 aa24.17■■□□□ 1.46
PITPNM1-213ENST00000530381 ARHGEF11O15085 1522 aa24.13■■□□□ 1.45
PITPNM1-213ENST00000530381 DNMBPQ6XZF7 1577 aa24.12■■□□□ 1.45
PITPNM1-213ENST00000530381 CYB5RLQ6IPT4 315 aa24.08■■□□□ 1.45
PITPNM1-213ENST00000530381 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.44
PITPNM1-213ENST00000530381 AQRO60306 1485 aaKnown RBP eCLIP24.07■■□□□ 1.442e-6■■□□□ 13.2
PITPNM1-213ENST00000530381 FBLN2P98095 1184 aa24.03■■□□□ 1.44
PITPNM1-213ENST00000530381 POLA1P09884 1462 aaPredicted RBP24■■□□□ 1.43
PITPNM1-213ENST00000530381 TARBP1Q13395 1621 aaKnown RBP23.99■■□□□ 1.43
PITPNM1-213ENST00000530381 SOGA1O94964 1423 aa23.95■■□□□ 1.42
PITPNM1-213ENST00000530381 TDRD9Q8NDG6 1382 aaKnown RBP23.91■■□□□ 1.42
PITPNM1-213ENST00000530381 RAD54L2Q9Y4B4 1467 aa23.9■■□□□ 1.42
PITPNM1-213ENST00000530381 TRHP20396 242 aaPredicted RBP23.9■■□□□ 1.42
PITPNM1-213ENST00000530381 ARAP1Q96P48 1450 aa23.87■■□□□ 1.41
PITPNM1-213ENST00000530381 CHD1O14646 1710 aa23.86■■□□□ 1.41
PITPNM1-213ENST00000530381 CHMP7Q8WUX9 453 aaPredicted RBP23.84■■□□□ 1.41
PITPNM1-213ENST00000530381 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
PITPNM1-213ENST00000530381 SNAPC4Q5SXM2 1469 aa23.8■■□□□ 1.4
PITPNM1-213ENST00000530381 WDR97A6NE52 1622 aa23.79■■□□□ 1.4
PITPNM1-213ENST00000530381 MAGI1Q96QZ7 1491 aaPredicted RBP23.76■■□□□ 1.39
PITPNM1-213ENST00000530381 GRIN2BQ13224 1484 aa23.75■■□□□ 1.39
PITPNM1-213ENST00000530381 CUX1P39880 1505 aa23.72■■□□□ 1.39
PITPNM1-213ENST00000530381 SYNJ1O43426 1573 aa23.69■■□□□ 1.38
PITPNM1-213ENST00000530381 CLASP1Q7Z460 1538 aa23.69■■□□□ 1.38
PITPNM1-213ENST00000530381 SYNJ2O15056 1496 aa23.68■■□□□ 1.38
PITPNM1-213ENST00000530381 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
PITPNM1-213ENST00000530381 ABCA10Q8WWZ4 1543 aa23.54■■□□□ 1.36
PITPNM1-213ENST00000530381 WRNQ14191 1432 aaPredicted RBP eCLIP23.47■■□□□ 1.35
PITPNM1-213ENST00000530381 SUPT5HO00267 1087 aaKnown RBP23.46■■□□□ 1.35
PITPNM1-213ENST00000530381 PBRM1Q86U86 1689 aa23.44■■□□□ 1.34
PITPNM1-213ENST00000530381 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
PITPNM1-213ENST00000530381 GRIN2AQ12879 1464 aa23.41■■□□□ 1.34
PITPNM1-213ENST00000530381 AEBP2Q6ZN18 517 aaPredicted RBP23.39■■□□□ 1.33
PITPNM1-213ENST00000530381 NUP160Q12769 1436 aa23.35■■□□□ 1.33
PITPNM1-213ENST00000530381 FHAD1B1AJZ9 1412 aa23.33■■□□□ 1.33
PITPNM1-213ENST00000530381 ADAMTS12P58397 1594 aa23.29■■□□□ 1.32
PITPNM1-213ENST00000530381 ERCC6L2Q5T890 1561 aa23.28■■□□□ 1.32
PITPNM1-213ENST00000530381 CEP170Q5SW79 1584 aa23.27■■□□□ 1.32
PITPNM1-213ENST00000530381 TOP2BQ02880 1626 aa23.27■■□□□ 1.32
PITPNM1-213ENST00000530381 ERICH3Q5RHP9 1530 aa23.24■■□□□ 1.31
PITPNM1-213ENST00000530381 BIVM-ERCC5R4GMW8 1640 aa23.22■■□□□ 1.31
PITPNM1-213ENST00000530381 JPH4Q96JJ6 628 aa23.2■■□□□ 1.3
PITPNM1-213ENST00000530381 SHROOM2Q13796 1616 aa23.19■■□□□ 1.3
PITPNM1-213ENST00000530381 PRG4Q92954 1404 aaPredicted RBP23.17■■□□□ 1.3
PITPNM1-213ENST00000530381 NPM1P06748 294 aaKnown RBP eCLIP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms