RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 NISCHQ9Y2I1 1504 aa19.03■□□□□ 0.64
NUP98-217ENST00000530345 CCDC180Q9P1Z9 1646 aa17.34■□□□□ 0.37
NUP98-217ENST00000530345 ABCC9O60706 1549 aa17.2■□□□□ 0.34
NUP98-217ENST00000530345 RB1CC1Q8TDY2 1594 aa16.49■□□□□ 0.23
NUP98-217ENST00000530345 NACADO15069 1562 aa16.34■□□□□ 0.21
NUP98-217ENST00000530345 UNC13AQ9UPW8 1703 aa16.16■□□□□ 0.18
NUP98-217ENST00000530345 DNAJC5BQ9UF47 199 aa16.13■□□□□ 0.17
NUP98-217ENST00000530345 MYO15BQ96JP2 1530 aa16.13■□□□□ 0.17
NUP98-217ENST00000530345 BICRAQ9NZM4 1560 aa15.93■□□□□ 0.14
NUP98-217ENST00000530345 SHROOM4Q9ULL8 1493 aa15.9■□□□□ 0.14
NUP98-217ENST00000530345 DCAF8L2P0C7V8 631 aa15.88■□□□□ 0.13
NUP98-217ENST00000530345 PABPN1Q86U42 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
NUP98-217ENST00000530345 DCAF1Q9Y4B6 1507 aa15.83■□□□□ 0.12
NUP98-217ENST00000530345 ZCCHC6Q5VYS8 1495 aaKnown RBP15.77■□□□□ 0.11
NUP98-217ENST00000530345 CC2D2AQ9P2K1 1620 aa15.63■□□□□ 0.09
NUP98-217ENST00000530345 SCRIBQ14160 1630 aa15.58■□□□□ 0.09
NUP98-217ENST00000530345 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.08
NUP98-217ENST00000530345 CECR2Q9BXF3 1484 aa15.57■□□□□ 0.08
NUP98-217ENST00000530345 DNAJC5Q9H3Z4 198 aa15.06■□□□□ 0
NUP98-217ENST00000530345 CUX2O14529 1486 aa15.05■□□□□ -0
NUP98-217ENST00000530345 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
NUP98-217ENST00000530345 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
NUP98-217ENST00000530345 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
NUP98-217ENST00000530345 ERCC6Q03468 1493 aa14.94□□□□□ -0.02
NUP98-217ENST00000530345 SMARCA4P51532 1647 aa14.92□□□□□ -0.02
NUP98-217ENST00000530345 ATAD2BQ9ULI0 1458 aa14.9□□□□□ -0.02
NUP98-217ENST00000530345 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
NUP98-217ENST00000530345 PEG3Q9GZU2 1588 aa14.84□□□□□ -0.03
NUP98-217ENST00000530345 BAZ1BQ9UIG0 1483 aaKnown RBP14.79□□□□□ -0.04
NUP98-217ENST00000530345 LAMC3Q9Y6N6 1575 aa14.79□□□□□ -0.04
NUP98-217ENST00000530345 THOC2Q8NI27 1593 aaKnown RBP14.76□□□□□ -0.05
NUP98-217ENST00000530345 NESP48681 1621 aa14.71□□□□□ -0.05
NUP98-217ENST00000530345 KIF21AQ7Z4S6 1674 aa14.68□□□□□ -0.06
NUP98-217ENST00000530345 PDS5BQ9NTI5 1447 aa14.63□□□□□ -0.07
NUP98-217ENST00000530345 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
NUP98-217ENST00000530345 WDR62O43379 1518 aa14.51□□□□□ -0.09
NUP98-217ENST00000530345 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
NUP98-217ENST00000530345 CADPSQ9ULU8 1353 aa14.5□□□□□ -0.09
NUP98-217ENST00000530345 WIZO95785 1651 aa14.46□□□□□ -0.1
NUP98-217ENST00000530345 PRDM2Q13029 1718 aa14.43□□□□□ -0.1
NUP98-217ENST00000530345 CEP164Q9UPV0 1460 aa14.43□□□□□ -0.1
NUP98-217ENST00000530345 FANCD2Q9BXW9 1451 aa14.35□□□□□ -0.11
NUP98-217ENST00000530345 CFTRP13569 1480 aa14.34□□□□□ -0.11
NUP98-217ENST00000530345 TOP2AP11388 1531 aaKnown RBP14.32□□□□□ -0.12
NUP98-217ENST00000530345 TRIM41Q8WV44 630 aa14.23□□□□□ -0.13
NUP98-217ENST00000530345 URB2Q14146 1524 aaKnown RBP14.22□□□□□ -0.13
NUP98-217ENST00000530345 RSF1Q96T23 1441 aaPredicted RBP14.22□□□□□ -0.13
NUP98-217ENST00000530345 OSCARQ8IYS5 282 aa14.19□□□□□ -0.14
NUP98-217ENST00000530345 IFT140Q96RY7 1462 aa14.15□□□□□ -0.14
NUP98-217ENST00000530345 ABCC8Q09428 1581 aa14.14□□□□□ -0.15
NUP98-217ENST00000530345 RIMBP3CA6NJZ7 1639 aa14.12□□□□□ -0.15
NUP98-217ENST00000530345 RIMBP3BA6NNM3 1639 aa14.12□□□□□ -0.15
NUP98-217ENST00000530345 RIMBP3Q9UFD9 1639 aa14.12□□□□□ -0.15
NUP98-217ENST00000530345 TOPBP1Q92547 1522 aa14.08□□□□□ -0.16
NUP98-217ENST00000530345 EIF4G3O43432 1585 aaKnown RBP14.08□□□□□ -0.16
NUP98-217ENST00000530345 DNMBPQ6XZF7 1577 aa14.07□□□□□ -0.16
NUP98-217ENST00000530345 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
NUP98-217ENST00000530345 ARHGEF11O15085 1522 aa14.04□□□□□ -0.16
NUP98-217ENST00000530345 CHD1O14646 1710 aa14.04□□□□□ -0.16
NUP98-217ENST00000530345 ZNF608Q9ULD9 1512 aaPredicted RBP14.02□□□□□ -0.16
NUP98-217ENST00000530345 WDR97A6NE52 1622 aa14.01□□□□□ -0.17
NUP98-217ENST00000530345 TARBP1Q13395 1621 aaKnown RBP14.01□□□□□ -0.17
NUP98-217ENST00000530345 POLA1P09884 1462 aaPredicted RBP13.91□□□□□ -0.18
NUP98-217ENST00000530345 AQRO60306 1485 aaKnown RBP eCLIP13.86□□□□□ -0.196e-6■□□□□ 8.5
NUP98-217ENST00000530345 ARAP1Q96P48 1450 aa13.86□□□□□ -0.19
NUP98-217ENST00000530345 SYNJ1O43426 1573 aa13.85□□□□□ -0.19
NUP98-217ENST00000530345 MAGI1Q96QZ7 1491 aaPredicted RBP13.84□□□□□ -0.19
NUP98-217ENST00000530345 CLASP1Q7Z460 1538 aa13.83□□□□□ -0.2
NUP98-217ENST00000530345 PBRM1Q86U86 1689 aa13.81□□□□□ -0.2
NUP98-217ENST00000530345 SOGA1O94964 1423 aa13.81□□□□□ -0.2
NUP98-217ENST00000530345 AEBP2Q6ZN18 517 aaPredicted RBP13.8□□□□□ -0.2
NUP98-217ENST00000530345 CYB5RLQ6IPT4 315 aa13.79□□□□□ -0.2
NUP98-217ENST00000530345 SNAPC4Q5SXM2 1469 aa13.79□□□□□ -0.2
NUP98-217ENST00000530345 FGD5Q6ZNL6 1462 aa13.79□□□□□ -0.2
NUP98-217ENST00000530345 GRIN2BQ13224 1484 aa13.77□□□□□ -0.21
NUP98-217ENST00000530345 RAD54L2Q9Y4B4 1467 aa13.77□□□□□ -0.21
NUP98-217ENST00000530345 SYNJ2O15056 1496 aa13.75□□□□□ -0.21
NUP98-217ENST00000530345 FBLN2P98095 1184 aa13.75□□□□□ -0.21
NUP98-217ENST00000530345 CUX1P39880 1505 aa13.74□□□□□ -0.21
NUP98-217ENST00000530345 TDRD9Q8NDG6 1382 aaKnown RBP13.72□□□□□ -0.21
NUP98-217ENST00000530345 ABCA5Q8WWZ7 1642 aa13.72□□□□□ -0.21
NUP98-217ENST00000530345 TRHP20396 242 aaPredicted RBP13.7□□□□□ -0.22
NUP98-217ENST00000530345 CHMP7Q8WUX9 453 aaPredicted RBP13.69□□□□□ -0.22
NUP98-217ENST00000530345 ABCA10Q8WWZ4 1543 aa13.68□□□□□ -0.22
NUP98-217ENST00000530345 GAPVD1Q14C86 1478 aa13.67□□□□□ -0.22
NUP98-217ENST00000530345 ADAMTS12P58397 1594 aa13.61□□□□□ -0.23
NUP98-217ENST00000530345 BIVM-ERCC5R4GMW8 1640 aa13.61□□□□□ -0.23
NUP98-217ENST00000530345 SHROOM2Q13796 1616 aa13.59□□□□□ -0.23
NUP98-217ENST00000530345 GRIN2AQ12879 1464 aa13.59□□□□□ -0.23
NUP98-217ENST00000530345 TOP2BQ02880 1626 aa13.57□□□□□ -0.24
NUP98-217ENST00000530345 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
NUP98-217ENST00000530345 NUP160Q12769 1436 aa13.55□□□□□ -0.24
NUP98-217ENST00000530345 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
NUP98-217ENST00000530345 CEP170Q5SW79 1584 aa13.54□□□□□ -0.24
NUP98-217ENST00000530345 KIF13AQ9H1H9 1805 aa13.52□□□□□ -0.25
NUP98-217ENST00000530345 FHAD1B1AJZ9 1412 aa13.51□□□□□ -0.25
NUP98-217ENST00000530345 ERCC6L2Q5T890 1561 aa13.48□□□□□ -0.25
NUP98-217ENST00000530345 CHIC1Q5VXU3 224 aa13.45□□□□□ -0.26
NUP98-217ENST00000530345 RUSC2Q8N2Y8 1516 aa13.43□□□□□ -0.26
NUP98-217ENST00000530345 MAPKBP1O60336 1514 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms