RNA–Protein interactions for RNA: ENST00000530280.1

XRRA1-212, Transcript of X-ray radiation resistance associated 1, humanhuman

TSL 3

Gene XRRA1, Length 414 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRRA1-212ENST00000530280 NISCHQ9Y2I1 1504 aa16.2■□□□□ 0.18
XRRA1-212ENST00000530280 CCDC180Q9P1Z9 1646 aa14.57□□□□□ -0.08
XRRA1-212ENST00000530280 ABCC9O60706 1549 aa13.9□□□□□ -0.18
XRRA1-212ENST00000530280 MYO15BQ96JP2 1530 aa13.58□□□□□ -0.24
XRRA1-212ENST00000530280 NACADO15069 1562 aa13.57□□□□□ -0.24
XRRA1-212ENST00000530280 ZCCHC6Q5VYS8 1495 aaKnown RBP13.55□□□□□ -0.24
XRRA1-212ENST00000530280 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
XRRA1-212ENST00000530280 DCAF1Q9Y4B6 1507 aa13.52□□□□□ -0.25
XRRA1-212ENST00000530280 UNC13AQ9UPW8 1703 aa13.44□□□□□ -0.26
XRRA1-212ENST00000530280 BICRAQ9NZM4 1560 aa13.2□□□□□ -0.3
XRRA1-212ENST00000530280 DCAF8L2P0C7V8 631 aa13.11□□□□□ -0.31
XRRA1-212ENST00000530280 SHROOM4Q9ULL8 1493 aa13.1□□□□□ -0.31
XRRA1-212ENST00000530280 SCRIBQ14160 1630 aa13.09□□□□□ -0.31
XRRA1-212ENST00000530280 PABPN1Q86U42 306 aaKnown RBP eCLIP12.87□□□□□ -0.35
XRRA1-212ENST00000530280 EIF4G1Q04637 1599 aaKnown RBP12.79□□□□□ -0.36
XRRA1-212ENST00000530280 CC2D2AQ9P2K1 1620 aa12.72□□□□□ -0.37
XRRA1-212ENST00000530280 DNAJC5BQ9UF47 199 aa12.69□□□□□ -0.38
XRRA1-212ENST00000530280 SMARCA4P51532 1647 aa12.62□□□□□ -0.39
XRRA1-212ENST00000530280 PEG3Q9GZU2 1588 aa12.56□□□□□ -0.4
XRRA1-212ENST00000530280 BAZ1AQ9NRL2 1556 aaPredicted RBP12.56□□□□□ -0.4
XRRA1-212ENST00000530280 CECR2Q9BXF3 1484 aa12.54□□□□□ -0.4
XRRA1-212ENST00000530280 SMARCA2P51531 1590 aa12.49□□□□□ -0.41
XRRA1-212ENST00000530280 HMGXB3Q12766 1538 aa12.49□□□□□ -0.41
XRRA1-212ENST00000530280 NCAPD3P42695 1498 aa12.46□□□□□ -0.41
XRRA1-212ENST00000530280 MROH2BQ7Z745 1585 aa12.45□□□□□ -0.42
XRRA1-212ENST00000530280 ATAD2BQ9ULI0 1458 aa12.45□□□□□ -0.42
XRRA1-212ENST00000530280 WIZO95785 1651 aa12.37□□□□□ -0.43
XRRA1-212ENST00000530280 BAZ1BQ9UIG0 1483 aaKnown RBP12.32□□□□□ -0.44
XRRA1-212ENST00000530280 RSF1Q96T23 1441 aaPredicted RBP12.28□□□□□ -0.44
XRRA1-212ENST00000530280 TOP2AP11388 1531 aaKnown RBP12.25□□□□□ -0.45
XRRA1-212ENST00000530280 PRDM2Q13029 1718 aa12.21□□□□□ -0.45
XRRA1-212ENST00000530280 LAMC3Q9Y6N6 1575 aa12.18□□□□□ -0.46
XRRA1-212ENST00000530280 KIF21AQ7Z4S6 1674 aa12.11□□□□□ -0.47
XRRA1-212ENST00000530280 NESP48681 1621 aa12.09□□□□□ -0.47
XRRA1-212ENST00000530280 THOC2Q8NI27 1593 aaKnown RBP12.06□□□□□ -0.48
XRRA1-212ENST00000530280 CFTRP13569 1480 aa12.03□□□□□ -0.48
XRRA1-212ENST00000530280 CADPSQ9ULU8 1353 aa12.03□□□□□ -0.48
XRRA1-212ENST00000530280 CCDC88BA6NC98 1476 aa12.01□□□□□ -0.49
XRRA1-212ENST00000530280 PDS5BQ9NTI5 1447 aa11.97□□□□□ -0.49
XRRA1-212ENST00000530280 CUX2O14529 1486 aa11.96□□□□□ -0.49
XRRA1-212ENST00000530280 ERCC6Q03468 1493 aa11.95□□□□□ -0.5
XRRA1-212ENST00000530280 WDR62O43379 1518 aa11.93□□□□□ -0.5
XRRA1-212ENST00000530280 FANCD2Q9BXW9 1451 aa11.9□□□□□ -0.5
XRRA1-212ENST00000530280 CEP164Q9UPV0 1460 aa11.9□□□□□ -0.5
XRRA1-212ENST00000530280 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
XRRA1-212ENST00000530280 URB2Q14146 1524 aaKnown RBP11.82□□□□□ -0.52
XRRA1-212ENST00000530280 DNMBPQ6XZF7 1577 aa11.8□□□□□ -0.52
XRRA1-212ENST00000530280 ABCC8Q09428 1581 aa11.77□□□□□ -0.53
XRRA1-212ENST00000530280 TOPBP1Q92547 1522 aa11.76□□□□□ -0.53
XRRA1-212ENST00000530280 WDR97A6NE52 1622 aa11.73□□□□□ -0.53
XRRA1-212ENST00000530280 SUPT5HO00267 1087 aaKnown RBP11.73□□□□□ -0.53
XRRA1-212ENST00000530280 TARBP1Q13395 1621 aaKnown RBP11.72□□□□□ -0.53
XRRA1-212ENST00000530280 BIVM-ERCC5R4GMW8 1640 aa11.72□□□□□ -0.53
XRRA1-212ENST00000530280 CUX1P39880 1505 aa11.7□□□□□ -0.54
XRRA1-212ENST00000530280 TOP2BQ02880 1626 aa11.67□□□□□ -0.54
XRRA1-212ENST00000530280 POLA1P09884 1462 aaPredicted RBP11.66□□□□□ -0.54
XRRA1-212ENST00000530280 IFT140Q96RY7 1462 aa11.66□□□□□ -0.54
XRRA1-212ENST00000530280 EIF4G3O43432 1585 aaKnown RBP11.64□□□□□ -0.55
XRRA1-212ENST00000530280 SYNJ1O43426 1573 aa11.62□□□□□ -0.55
XRRA1-212ENST00000530280 FGD5Q6ZNL6 1462 aa11.61□□□□□ -0.55
XRRA1-212ENST00000530280 PBRM1Q86U86 1689 aa11.59□□□□□ -0.55
XRRA1-212ENST00000530280 ABCA5Q8WWZ7 1642 aa11.59□□□□□ -0.55
XRRA1-212ENST00000530280 ZNF608Q9ULD9 1512 aaPredicted RBP11.58□□□□□ -0.56
XRRA1-212ENST00000530280 ABCA10Q8WWZ4 1543 aa11.55□□□□□ -0.56
XRRA1-212ENST00000530280 WRNQ14191 1432 aaPredicted RBP eCLIP11.55□□□□□ -0.56
XRRA1-212ENST00000530280 CHD1O14646 1710 aa11.55□□□□□ -0.56
XRRA1-212ENST00000530280 RAD54L2Q9Y4B4 1467 aa11.53□□□□□ -0.56
XRRA1-212ENST00000530280 SOGA1O94964 1423 aa11.52□□□□□ -0.57
XRRA1-212ENST00000530280 AQRO60306 1485 aaKnown RBP eCLIP11.46□□□□□ -0.57
XRRA1-212ENST00000530280 MAGI1Q96QZ7 1491 aaPredicted RBP11.45□□□□□ -0.58
XRRA1-212ENST00000530280 GRIN2BQ13224 1484 aa11.44□□□□□ -0.58
XRRA1-212ENST00000530280 ADAMTS12P58397 1594 aa11.44□□□□□ -0.58
XRRA1-212ENST00000530280 ERICH3Q5RHP9 1530 aa11.44□□□□□ -0.58
XRRA1-212ENST00000530280 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
XRRA1-212ENST00000530280 DNAJC5Q9H3Z4 198 aa11.42□□□□□ -0.58
XRRA1-212ENST00000530280 SNAPC4Q5SXM2 1469 aa11.41□□□□□ -0.58
XRRA1-212ENST00000530280 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
XRRA1-212ENST00000530280 CUL7Q14999 1698 aa11.39□□□□□ -0.59
XRRA1-212ENST00000530280 SYNJ2O15056 1496 aa11.38□□□□□ -0.59
XRRA1-212ENST00000530280 CLASP1Q7Z460 1538 aa11.38□□□□□ -0.59
XRRA1-212ENST00000530280 SHROOM2Q13796 1616 aa11.32□□□□□ -0.6
XRRA1-212ENST00000530280 GRIN2AQ12879 1464 aa11.32□□□□□ -0.6
XRRA1-212ENST00000530280 FHAD1B1AJZ9 1412 aa11.31□□□□□ -0.6
XRRA1-212ENST00000530280 RIMBP3CA6NJZ7 1639 aa11.31□□□□□ -0.6
XRRA1-212ENST00000530280 RIMBP3BA6NNM3 1639 aa11.31□□□□□ -0.6
XRRA1-212ENST00000530280 RIMBP3Q9UFD9 1639 aa11.31□□□□□ -0.6
XRRA1-212ENST00000530280 CEP170Q5SW79 1584 aa11.3□□□□□ -0.6
XRRA1-212ENST00000530280 NUP160Q12769 1436 aa11.3□□□□□ -0.6
XRRA1-212ENST00000530280 KIF27Q86VH2 1401 aa11.3□□□□□ -0.6
XRRA1-212ENST00000530280 RUSC2Q8N2Y8 1516 aa11.29□□□□□ -0.6
XRRA1-212ENST00000530280 OSCARQ8IYS5 282 aa11.28□□□□□ -0.6
XRRA1-212ENST00000530280 ARHGEF11O15085 1522 aa11.26□□□□□ -0.61
XRRA1-212ENST00000530280 IGF1RP08069 1367 aa11.24□□□□□ -0.61
XRRA1-212ENST00000530280 CTTNBP2Q8WZ74 1663 aa11.24□□□□□ -0.61
XRRA1-212ENST00000530280 CHMP7Q8WUX9 453 aaPredicted RBP11.19□□□□□ -0.62
XRRA1-212ENST00000530280 ARAP1Q96P48 1450 aa11.17□□□□□ -0.62
XRRA1-212ENST00000530280 PRXQ9BXM0 1461 aa11.17□□□□□ -0.62
XRRA1-212ENST00000530280 EEA1Q15075 1411 aa11.17□□□□□ -0.62
XRRA1-212ENST00000530280 ERCC6L2Q5T890 1561 aa11.16□□□□□ -0.62
XRRA1-212ENST00000530280 CARMIL1Q5VZK9 1371 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms