RNA–Protein interactions for RNA: ENST00000529445.1

SORL1-208, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 616 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-208ENST00000529445 NISCHQ9Y2I1 1504 aa30.13■■■□□ 2.41
SORL1-208ENST00000529445 CCDC180Q9P1Z9 1646 aa27.05■■□□□ 1.92
SORL1-208ENST00000529445 ABCC9O60706 1549 aa26.76■■□□□ 1.87
SORL1-208ENST00000529445 RB1CC1Q8TDY2 1594 aa25.63■■□□□ 1.69
SORL1-208ENST00000529445 NACADO15069 1562 aa25.48■■□□□ 1.67
SORL1-208ENST00000529445 DCAF8L2P0C7V8 631 aa25.24■■□□□ 1.63
SORL1-208ENST00000529445 MYO15BQ96JP2 1530 aa25.2■■□□□ 1.62
SORL1-208ENST00000529445 UNC13AQ9UPW8 1703 aa25.07■■□□□ 1.6
SORL1-208ENST00000529445 ZCCHC6Q5VYS8 1495 aaKnown RBP25.03■■□□□ 1.6
SORL1-208ENST00000529445 DCAF1Q9Y4B6 1507 aa24.94■■□□□ 1.58
SORL1-208ENST00000529445 PABPN1Q86U42 306 aaKnown RBP eCLIP24.88■■□□□ 1.57
SORL1-208ENST00000529445 DNAJC5BQ9UF47 199 aa24.85■■□□□ 1.57
SORL1-208ENST00000529445 BICRAQ9NZM4 1560 aa24.83■■□□□ 1.57
SORL1-208ENST00000529445 SCRIBQ14160 1630 aa24.61■■□□□ 1.53
SORL1-208ENST00000529445 SHROOM4Q9ULL8 1493 aa24.6■■□□□ 1.53
SORL1-208ENST00000529445 EIF4G1Q04637 1599 aaKnown RBP24.23■■□□□ 1.47
SORL1-208ENST00000529445 CC2D2AQ9P2K1 1620 aa24.23■■□□□ 1.47
SORL1-208ENST00000529445 CECR2Q9BXF3 1484 aa24.11■■□□□ 1.45
SORL1-208ENST00000529445 SMARCA4P51532 1647 aa23.49■■□□□ 1.35
SORL1-208ENST00000529445 NCAPD3P42695 1498 aa23.48■■□□□ 1.35
SORL1-208ENST00000529445 SMARCA2P51531 1590 aa23.43■■□□□ 1.34
SORL1-208ENST00000529445 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
SORL1-208ENST00000529445 BAZ1AQ9NRL2 1556 aaPredicted RBP23.41■■□□□ 1.34
SORL1-208ENST00000529445 HMGXB3Q12766 1538 aa23.38■■□□□ 1.33
SORL1-208ENST00000529445 PEG3Q9GZU2 1588 aa23.27■■□□□ 1.32
SORL1-208ENST00000529445 BAZ1BQ9UIG0 1483 aaKnown RBP23.24■■□□□ 1.31
SORL1-208ENST00000529445 MROH2BQ7Z745 1585 aa23.19■■□□□ 1.3
SORL1-208ENST00000529445 ERCC6Q03468 1493 aa23.14■■□□□ 1.29
SORL1-208ENST00000529445 CUX2O14529 1486 aa23.05■■□□□ 1.28
SORL1-208ENST00000529445 NESP48681 1621 aa23.03■■□□□ 1.28
SORL1-208ENST00000529445 LAMC3Q9Y6N6 1575 aa22.98■■□□□ 1.27
SORL1-208ENST00000529445 WIZO95785 1651 aa22.95■■□□□ 1.26
SORL1-208ENST00000529445 THOC2Q8NI27 1593 aaKnown RBP22.84■■□□□ 1.25
SORL1-208ENST00000529445 KIF21AQ7Z4S6 1674 aa22.82■■□□□ 1.24
SORL1-208ENST00000529445 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
SORL1-208ENST00000529445 RSF1Q96T23 1441 aaPredicted RBP22.76■■□□□ 1.23
SORL1-208ENST00000529445 CADPSQ9ULU8 1353 aa22.76■■□□□ 1.23
SORL1-208ENST00000529445 DNAJC5Q9H3Z4 198 aa22.74■■□□□ 1.23
SORL1-208ENST00000529445 TOP2AP11388 1531 aaKnown RBP22.7■■□□□ 1.22
SORL1-208ENST00000529445 MRC2Q9UBG0 1479 aa22.61■■□□□ 1.21
SORL1-208ENST00000529445 WDR62O43379 1518 aa22.57■■□□□ 1.2
SORL1-208ENST00000529445 CEP164Q9UPV0 1460 aa22.56■■□□□ 1.2
SORL1-208ENST00000529445 CFTRP13569 1480 aa22.55■■□□□ 1.2
SORL1-208ENST00000529445 FANCD2Q9BXW9 1451 aa22.53■■□□□ 1.2
SORL1-208ENST00000529445 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
SORL1-208ENST00000529445 PRDM2Q13029 1718 aa22.48■■□□□ 1.19
SORL1-208ENST00000529445 CHIC1Q5VXU3 224 aa22.41■■□□□ 1.18
SORL1-208ENST00000529445 CCDC88BA6NC98 1476 aa22.38■■□□□ 1.17
SORL1-208ENST00000529445 URB2Q14146 1524 aaKnown RBP22.32■■□□□ 1.16
SORL1-208ENST00000529445 TOPBP1Q92547 1522 aa22.12■■□□□ 1.13
SORL1-208ENST00000529445 ABCC8Q09428 1581 aa22.12■■□□□ 1.13
SORL1-208ENST00000529445 IFT140Q96RY7 1462 aa22.09■■□□□ 1.13
SORL1-208ENST00000529445 DNMBPQ6XZF7 1577 aa22.09■■□□□ 1.13
SORL1-208ENST00000529445 ZNF608Q9ULD9 1512 aaPredicted RBP22■■□□□ 1.11
SORL1-208ENST00000529445 EIF4G3O43432 1585 aaKnown RBP21.96■■□□□ 1.11
SORL1-208ENST00000529445 OSCARQ8IYS5 282 aa21.94■■□□□ 1.1
SORL1-208ENST00000529445 TARBP1Q13395 1621 aaKnown RBP21.93■■□□□ 1.1
SORL1-208ENST00000529445 POLA1P09884 1462 aaPredicted RBP21.9■■□□□ 1.1
SORL1-208ENST00000529445 SUPT5HO00267 1087 aaKnown RBP21.82■■□□□ 1.08
SORL1-208ENST00000529445 TRIM41Q8WV44 630 aa21.82■■□□□ 1.08
SORL1-208ENST00000529445 CUX1P39880 1505 aa21.8■■□□□ 1.08
SORL1-208ENST00000529445 AQRO60306 1485 aaKnown RBP eCLIP21.8■■□□□ 1.08
SORL1-208ENST00000529445 FGD5Q6ZNL6 1462 aa21.79■■□□□ 1.08
SORL1-208ENST00000529445 WDR97A6NE52 1622 aa21.79■■□□□ 1.08
SORL1-208ENST00000529445 RAD54L2Q9Y4B4 1467 aa21.78■■□□□ 1.08
SORL1-208ENST00000529445 SOGA1O94964 1423 aa21.78■■□□□ 1.08
SORL1-208ENST00000529445 CHD1O14646 1710 aa21.77■■□□□ 1.08
SORL1-208ENST00000529445 RIMBP3CA6NJZ7 1639 aa21.72■■□□□ 1.07
SORL1-208ENST00000529445 RIMBP3BA6NNM3 1639 aa21.72■■□□□ 1.07
SORL1-208ENST00000529445 RIMBP3Q9UFD9 1639 aa21.72■■□□□ 1.07
SORL1-208ENST00000529445 TDRD9Q8NDG6 1382 aaKnown RBP21.69■■□□□ 1.06
SORL1-208ENST00000529445 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
SORL1-208ENST00000529445 SNAPC4Q5SXM2 1469 aa21.64■■□□□ 1.05
SORL1-208ENST00000529445 MAGI1Q96QZ7 1491 aaPredicted RBP21.62■■□□□ 1.05
SORL1-208ENST00000529445 GRIN2BQ13224 1484 aa21.61■■□□□ 1.05
SORL1-208ENST00000529445 FBLN2P98095 1184 aa21.61■■□□□ 1.05
SORL1-208ENST00000529445 PBRM1Q86U86 1689 aa21.6■■□□□ 1.05
SORL1-208ENST00000529445 ABCA10Q8WWZ4 1543 aa21.57■■□□□ 1.04
SORL1-208ENST00000529445 ABCA5Q8WWZ7 1642 aa21.55■■□□□ 1.04
SORL1-208ENST00000529445 BIVM-ERCC5R4GMW8 1640 aa21.55■■□□□ 1.04
SORL1-208ENST00000529445 GAPVD1Q14C86 1478 aa21.54■■□□□ 1.04
SORL1-208ENST00000529445 TOP2BQ02880 1626 aa21.53■■□□□ 1.04
SORL1-208ENST00000529445 SYNJ1O43426 1573 aa21.53■■□□□ 1.04
SORL1-208ENST00000529445 SYNJ2O15056 1496 aa21.52■■□□□ 1.04
SORL1-208ENST00000529445 CLASP1Q7Z460 1538 aa21.5■■□□□ 1.03
SORL1-208ENST00000529445 WRNQ14191 1432 aaPredicted RBP eCLIP21.5■■□□□ 1.03
SORL1-208ENST00000529445 CHMP7Q8WUX9 453 aaPredicted RBP21.49■■□□□ 1.03
SORL1-208ENST00000529445 ARAP1Q96P48 1450 aa21.45■■□□□ 1.02
SORL1-208ENST00000529445 CYB5RLQ6IPT4 315 aa21.4■■□□□ 1.02
SORL1-208ENST00000529445 ADAMTS12P58397 1594 aa21.39■■□□□ 1.01
SORL1-208ENST00000529445 GRIN2AQ12879 1464 aa21.33■■□□□ 1.01
SORL1-208ENST00000529445 ERICH3Q5RHP9 1530 aa21.32■■□□□ 1
SORL1-208ENST00000529445 FHAD1B1AJZ9 1412 aa21.28■■□□□ 1
SORL1-208ENST00000529445 CEP170Q5SW79 1584 aa21.26■□□□□ 0.99
SORL1-208ENST00000529445 NUP160Q12769 1436 aa21.24■□□□□ 0.99
SORL1-208ENST00000529445 SHROOM2Q13796 1616 aa21.18■□□□□ 0.98
SORL1-208ENST00000529445 ERCC6L2Q5T890 1561 aa21.14■□□□□ 0.97
SORL1-208ENST00000529445 TRHP20396 242 aaPredicted RBP21.12■□□□□ 0.97
SORL1-208ENST00000529445 RUSC2Q8N2Y8 1516 aa21.09■□□□□ 0.97
SORL1-208ENST00000529445 CUL7Q14999 1698 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms