RNA–Protein interactions for RNA: ENST00000529396.1

SPOCD1-211, Transcript of SPOC domain containing 1, humanhuman

TSL 4

Gene SPOCD1, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCD1-211ENST00000529396 NISCHQ9Y2I1 1504 aa33.63■■■□□ 2.97
SPOCD1-211ENST00000529396 CCDC180Q9P1Z9 1646 aa30.18■■■□□ 2.42
SPOCD1-211ENST00000529396 ABCC9O60706 1549 aa29.84■■■□□ 2.37
SPOCD1-211ENST00000529396 RB1CC1Q8TDY2 1594 aa28.53■■■□□ 2.16
SPOCD1-211ENST00000529396 NACADO15069 1562 aa28.38■■■□□ 2.13
SPOCD1-211ENST00000529396 DCAF8L2P0C7V8 631 aa28.26■■■□□ 2.11
SPOCD1-211ENST00000529396 MYO15BQ96JP2 1530 aa28.08■■■□□ 2.08
SPOCD1-211ENST00000529396 UNC13AQ9UPW8 1703 aa28.05■■■□□ 2.08
SPOCD1-211ENST00000529396 ZCCHC6Q5VYS8 1495 aaKnown RBP28.02■■■□□ 2.08
SPOCD1-211ENST00000529396 DCAF1Q9Y4B6 1507 aa27.85■■■□□ 2.05
SPOCD1-211ENST00000529396 PABPN1Q86U42 306 aaKnown RBP eCLIP27.78■■■□□ 2.04
SPOCD1-211ENST00000529396 BICRAQ9NZM4 1560 aa27.72■■■□□ 2.03
SPOCD1-211ENST00000529396 DNAJC5BQ9UF47 199 aa27.7■■■□□ 2.02
SPOCD1-211ENST00000529396 SCRIBQ14160 1630 aa27.47■■□□□ 1.99
SPOCD1-211ENST00000529396 SHROOM4Q9ULL8 1493 aa27.33■■□□□ 1.97
SPOCD1-211ENST00000529396 CC2D2AQ9P2K1 1620 aa26.99■■□□□ 1.91
SPOCD1-211ENST00000529396 EIF4G1Q04637 1599 aaKnown RBP26.99■■□□□ 1.91
SPOCD1-211ENST00000529396 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
SPOCD1-211ENST00000529396 SMARCA4P51532 1647 aa26.25■■□□□ 1.79
SPOCD1-211ENST00000529396 NCAPD3P42695 1498 aa26.15■■□□□ 1.78
SPOCD1-211ENST00000529396 ATAD2BQ9ULI0 1458 aa26.11■■□□□ 1.77
SPOCD1-211ENST00000529396 SMARCA2P51531 1590 aa26.1■■□□□ 1.77
SPOCD1-211ENST00000529396 BAZ1AQ9NRL2 1556 aaPredicted RBP26.1■■□□□ 1.77
SPOCD1-211ENST00000529396 HMGXB3Q12766 1538 aa26.05■■□□□ 1.76
SPOCD1-211ENST00000529396 PEG3Q9GZU2 1588 aa25.98■■□□□ 1.75
SPOCD1-211ENST00000529396 MROH2BQ7Z745 1585 aa25.93■■□□□ 1.74
SPOCD1-211ENST00000529396 BAZ1BQ9UIG0 1483 aaKnown RBP25.9■■□□□ 1.74
SPOCD1-211ENST00000529396 ERCC6Q03468 1493 aa25.83■■□□□ 1.73
SPOCD1-211ENST00000529396 RSF1Q96T23 1441 aaPredicted RBP25.73■■□□□ 1.71
SPOCD1-211ENST00000529396 NESP48681 1621 aa25.69■■□□□ 1.7
SPOCD1-211ENST00000529396 WIZO95785 1651 aa25.68■■□□□ 1.7
SPOCD1-211ENST00000529396 CUX2O14529 1486 aa25.66■■□□□ 1.7
SPOCD1-211ENST00000529396 LAMC3Q9Y6N6 1575 aa25.59■■□□□ 1.69
SPOCD1-211ENST00000529396 KIF21AQ7Z4S6 1674 aa25.48■■□□□ 1.67
SPOCD1-211ENST00000529396 THOC2Q8NI27 1593 aaKnown RBP25.47■■□□□ 1.67
SPOCD1-211ENST00000529396 PDS5BQ9NTI5 1447 aa25.41■■□□□ 1.66
SPOCD1-211ENST00000529396 DNAJC5Q9H3Z4 198 aa25.38■■□□□ 1.65
SPOCD1-211ENST00000529396 TOP2AP11388 1531 aaKnown RBP25.35■■□□□ 1.65
SPOCD1-211ENST00000529396 CADPSQ9ULU8 1353 aa25.34■■□□□ 1.65
SPOCD1-211ENST00000529396 SUPT5HO00267 1087 aaKnown RBP25.34■■□□□ 1.65
SPOCD1-211ENST00000529396 MRC2Q9UBG0 1479 aa25.17■■□□□ 1.62
SPOCD1-211ENST00000529396 CFTRP13569 1480 aa25.15■■□□□ 1.62
SPOCD1-211ENST00000529396 WDR62O43379 1518 aa25.13■■□□□ 1.61
SPOCD1-211ENST00000529396 PRDM2Q13029 1718 aa25.13■■□□□ 1.61
SPOCD1-211ENST00000529396 CEP164Q9UPV0 1460 aa25.13■■□□□ 1.61
SPOCD1-211ENST00000529396 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
SPOCD1-211ENST00000529396 CCDC88BA6NC98 1476 aa25.05■■□□□ 1.6
SPOCD1-211ENST00000529396 URB2Q14146 1524 aaKnown RBP24.9■■□□□ 1.58
SPOCD1-211ENST00000529396 TOPBP1Q92547 1522 aa24.67■■□□□ 1.54
SPOCD1-211ENST00000529396 DNMBPQ6XZF7 1577 aa24.63■■□□□ 1.53
SPOCD1-211ENST00000529396 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
SPOCD1-211ENST00000529396 IFT140Q96RY7 1462 aa24.6■■□□□ 1.53
SPOCD1-211ENST00000529396 ZNF608Q9ULD9 1512 aaPredicted RBP24.53■■□□□ 1.52
SPOCD1-211ENST00000529396 OSCARQ8IYS5 282 aa24.51■■□□□ 1.51
SPOCD1-211ENST00000529396 EIF4G3O43432 1585 aaKnown RBP24.5■■□□□ 1.51
SPOCD1-211ENST00000529396 TARBP1Q13395 1621 aaKnown RBP24.49■■□□□ 1.51
SPOCD1-211ENST00000529396 POLA1P09884 1462 aaPredicted RBP24.44■■□□□ 1.5
SPOCD1-211ENST00000529396 TRIM41Q8WV44 630 aa24.42■■□□□ 1.5
SPOCD1-211ENST00000529396 CUX1P39880 1505 aa24.35■■□□□ 1.49
SPOCD1-211ENST00000529396 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
SPOCD1-211ENST00000529396 CHD1O14646 1710 aa24.31■■□□□ 1.48
SPOCD1-211ENST00000529396 AQRO60306 1485 aaKnown RBP eCLIP24.31■■□□□ 1.48
SPOCD1-211ENST00000529396 RAD54L2Q9Y4B4 1467 aa24.31■■□□□ 1.48
SPOCD1-211ENST00000529396 SOGA1O94964 1423 aa24.27■■□□□ 1.48
SPOCD1-211ENST00000529396 WDR97A6NE52 1622 aa24.27■■□□□ 1.48
SPOCD1-211ENST00000529396 WRNQ14191 1432 aaPredicted RBP eCLIP24.24■■□□□ 1.47
SPOCD1-211ENST00000529396 TDRD9Q8NDG6 1382 aaKnown RBP24.18■■□□□ 1.46
SPOCD1-211ENST00000529396 RIMBP3CA6NJZ7 1639 aa24.18■■□□□ 1.46
SPOCD1-211ENST00000529396 RIMBP3BA6NNM3 1639 aa24.18■■□□□ 1.46
SPOCD1-211ENST00000529396 RIMBP3Q9UFD9 1639 aa24.18■■□□□ 1.46
SPOCD1-211ENST00000529396 FBLN2P98095 1184 aa24.18■■□□□ 1.46
SPOCD1-211ENST00000529396 PBRM1Q86U86 1689 aa24.13■■□□□ 1.45
SPOCD1-211ENST00000529396 ARHGEF11O15085 1522 aa24.12■■□□□ 1.45
SPOCD1-211ENST00000529396 TOP2BQ02880 1626 aa24.12■■□□□ 1.45
SPOCD1-211ENST00000529396 SNAPC4Q5SXM2 1469 aa24.11■■□□□ 1.45
SPOCD1-211ENST00000529396 BIVM-ERCC5R4GMW8 1640 aa24.1■■□□□ 1.45
SPOCD1-211ENST00000529396 SYNJ1O43426 1573 aa24.08■■□□□ 1.44
SPOCD1-211ENST00000529396 ABCA5Q8WWZ7 1642 aa24.07■■□□□ 1.44
SPOCD1-211ENST00000529396 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
SPOCD1-211ENST00000529396 MAGI1Q96QZ7 1491 aaPredicted RBP24.06■■□□□ 1.44
SPOCD1-211ENST00000529396 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
SPOCD1-211ENST00000529396 CHMP7Q8WUX9 453 aaPredicted RBP24.02■■□□□ 1.44
SPOCD1-211ENST00000529396 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
SPOCD1-211ENST00000529396 CLASP1Q7Z460 1538 aa23.96■■□□□ 1.43
SPOCD1-211ENST00000529396 SYNJ2O15056 1496 aa23.96■■□□□ 1.43
SPOCD1-211ENST00000529396 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
SPOCD1-211ENST00000529396 CYB5RLQ6IPT4 315 aa23.92■■□□□ 1.42
SPOCD1-211ENST00000529396 ARAP1Q96P48 1450 aa23.87■■□□□ 1.41
SPOCD1-211ENST00000529396 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
SPOCD1-211ENST00000529396 GRIN2AQ12879 1464 aa23.77■■□□□ 1.4
SPOCD1-211ENST00000529396 ERICH3Q5RHP9 1530 aa23.77■■□□□ 1.4
SPOCD1-211ENST00000529396 KIF27Q86VH2 1401 aa23.73■■□□□ 1.39
SPOCD1-211ENST00000529396 CEP170Q5SW79 1584 aa23.73■■□□□ 1.39
SPOCD1-211ENST00000529396 FHAD1B1AJZ9 1412 aa23.7■■□□□ 1.38
SPOCD1-211ENST00000529396 NUP160Q12769 1436 aa23.67■■□□□ 1.38
SPOCD1-211ENST00000529396 TRHP20396 242 aaPredicted RBP23.66■■□□□ 1.38
SPOCD1-211ENST00000529396 SHROOM2Q13796 1616 aa23.62■■□□□ 1.37
SPOCD1-211ENST00000529396 IGF1RP08069 1367 aa23.61■■□□□ 1.37
SPOCD1-211ENST00000529396 ERCC6L2Q5T890 1561 aa23.61■■□□□ 1.37
SPOCD1-211ENST00000529396 EEA1Q15075 1411 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms