RNA–Protein interactions for RNA: ENST00000529150.1

TRAF6-203, Transcript of TNF receptor associated factor 6, humanhuman

TSL 5

Gene TRAF6, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6-203ENST00000529150 NISCHQ9Y2I1 1504 aa19.7■□□□□ 0.74
TRAF6-203ENST00000529150 CCDC180Q9P1Z9 1646 aa17.67■□□□□ 0.42
TRAF6-203ENST00000529150 ABCC9O60706 1549 aa17.22■□□□□ 0.35
TRAF6-203ENST00000529150 RB1CC1Q8TDY2 1594 aa16.6■□□□□ 0.25
TRAF6-203ENST00000529150 NACADO15069 1562 aa16.58■□□□□ 0.24
TRAF6-203ENST00000529150 MYO15BQ96JP2 1530 aa16.53■□□□□ 0.24
TRAF6-203ENST00000529150 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
TRAF6-203ENST00000529150 DCAF1Q9Y4B6 1507 aa16.39■□□□□ 0.21
TRAF6-203ENST00000529150 UNC13AQ9UPW8 1703 aa16.34■□□□□ 0.21
TRAF6-203ENST00000529150 BICRAQ9NZM4 1560 aa16.2■□□□□ 0.18
TRAF6-203ENST00000529150 DCAF8L2P0C7V8 631 aa16.15■□□□□ 0.18
TRAF6-203ENST00000529150 SHROOM4Q9ULL8 1493 aa16.03■□□□□ 0.16
TRAF6-203ENST00000529150 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
TRAF6-203ENST00000529150 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
TRAF6-203ENST00000529150 SCRIBQ14160 1630 aa15.96■□□□□ 0.15
TRAF6-203ENST00000529150 EIF4G1Q04637 1599 aaKnown RBP15.72■□□□□ 0.11
TRAF6-203ENST00000529150 CC2D2AQ9P2K1 1620 aa15.67■□□□□ 0.1
TRAF6-203ENST00000529150 CECR2Q9BXF3 1484 aa15.52■□□□□ 0.08
TRAF6-203ENST00000529150 SMARCA4P51532 1647 aa15.34■□□□□ 0.05
TRAF6-203ENST00000529150 NCAPD3P42695 1498 aa15.29■□□□□ 0.04
TRAF6-203ENST00000529150 PEG3Q9GZU2 1588 aa15.28■□□□□ 0.04
TRAF6-203ENST00000529150 BAZ1AQ9NRL2 1556 aaPredicted RBP15.27■□□□□ 0.03
TRAF6-203ENST00000529150 ATAD2BQ9ULI0 1458 aa15.26■□□□□ 0.03
TRAF6-203ENST00000529150 HMGXB3Q12766 1538 aa15.25■□□□□ 0.03
TRAF6-203ENST00000529150 SMARCA2P51531 1590 aa15.23■□□□□ 0.03
TRAF6-203ENST00000529150 AEBP2Q6ZN18 517 aaPredicted RBP15.2■□□□□ 0.02
TRAF6-203ENST00000529150 MROH2BQ7Z745 1585 aa15.16■□□□□ 0.02
TRAF6-203ENST00000529150 BAZ1BQ9UIG0 1483 aaKnown RBP15.07■□□□□ 0
TRAF6-203ENST00000529150 WIZO95785 1651 aa14.99□□□□□ -0.01
TRAF6-203ENST00000529150 LAMC3Q9Y6N6 1575 aa14.92□□□□□ -0.02
TRAF6-203ENST00000529150 RSF1Q96T23 1441 aaPredicted RBP14.92□□□□□ -0.02
TRAF6-203ENST00000529150 NESP48681 1621 aa14.91□□□□□ -0.02
TRAF6-203ENST00000529150 CUX2O14529 1486 aa14.85□□□□□ -0.03
TRAF6-203ENST00000529150 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
TRAF6-203ENST00000529150 THOC2Q8NI27 1593 aaKnown RBP14.84□□□□□ -0.03
TRAF6-203ENST00000529150 ERCC6Q03468 1493 aa14.81□□□□□ -0.04
TRAF6-203ENST00000529150 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
TRAF6-203ENST00000529150 CHIC1Q5VXU3 224 aa14.79□□□□□ -0.04
TRAF6-203ENST00000529150 CADPSQ9ULU8 1353 aa14.77□□□□□ -0.04
TRAF6-203ENST00000529150 PDS5BQ9NTI5 1447 aa14.73□□□□□ -0.05
TRAF6-203ENST00000529150 CFTRP13569 1480 aa14.72□□□□□ -0.05
TRAF6-203ENST00000529150 PRDM2Q13029 1718 aa14.69□□□□□ -0.06
TRAF6-203ENST00000529150 WDR62O43379 1518 aa14.66□□□□□ -0.06
TRAF6-203ENST00000529150 MRC2Q9UBG0 1479 aa14.63□□□□□ -0.07
TRAF6-203ENST00000529150 CCDC88BA6NC98 1476 aa14.62□□□□□ -0.07
TRAF6-203ENST00000529150 FANCD2Q9BXW9 1451 aa14.6□□□□□ -0.07
TRAF6-203ENST00000529150 CEP164Q9UPV0 1460 aa14.59□□□□□ -0.07
TRAF6-203ENST00000529150 URB2Q14146 1524 aaKnown RBP14.51□□□□□ -0.09
TRAF6-203ENST00000529150 DNAJC5Q9H3Z4 198 aa14.48□□□□□ -0.09
TRAF6-203ENST00000529150 TOPBP1Q92547 1522 aa14.38□□□□□ -0.11
TRAF6-203ENST00000529150 DNMBPQ6XZF7 1577 aa14.38□□□□□ -0.11
TRAF6-203ENST00000529150 ABCC8Q09428 1581 aa14.36□□□□□ -0.11
TRAF6-203ENST00000529150 TARBP1Q13395 1621 aaKnown RBP14.32□□□□□ -0.12
TRAF6-203ENST00000529150 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
TRAF6-203ENST00000529150 POLA1P09884 1462 aaPredicted RBP14.26□□□□□ -0.13
TRAF6-203ENST00000529150 ZNF608Q9ULD9 1512 aaPredicted RBP14.25□□□□□ -0.13
TRAF6-203ENST00000529150 EIF4G3O43432 1585 aaKnown RBP14.25□□□□□ -0.13
TRAF6-203ENST00000529150 CUX1P39880 1505 aa14.24□□□□□ -0.13
TRAF6-203ENST00000529150 WDR97A6NE52 1622 aa14.22□□□□□ -0.13
TRAF6-203ENST00000529150 SUPT5HO00267 1087 aaKnown RBP14.17□□□□□ -0.14
TRAF6-203ENST00000529150 FGD5Q6ZNL6 1462 aa14.17□□□□□ -0.14
TRAF6-203ENST00000529150 BIVM-ERCC5R4GMW8 1640 aa14.14□□□□□ -0.15
TRAF6-203ENST00000529150 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
TRAF6-203ENST00000529150 SOGA1O94964 1423 aa14.11□□□□□ -0.15
TRAF6-203ENST00000529150 TOP2BQ02880 1626 aa14.11□□□□□ -0.15
TRAF6-203ENST00000529150 AQRO60306 1485 aaKnown RBP eCLIP14.11□□□□□ -0.15
TRAF6-203ENST00000529150 CHD1O14646 1710 aa14.1□□□□□ -0.15
TRAF6-203ENST00000529150 ABCA5Q8WWZ7 1642 aa14.08□□□□□ -0.15
TRAF6-203ENST00000529150 ABCA10Q8WWZ4 1543 aa14.08□□□□□ -0.16
TRAF6-203ENST00000529150 SYNJ1O43426 1573 aa14.07□□□□□ -0.16
TRAF6-203ENST00000529150 PBRM1Q86U86 1689 aa14.05□□□□□ -0.16
TRAF6-203ENST00000529150 OSCARQ8IYS5 282 aa14.05□□□□□ -0.16
TRAF6-203ENST00000529150 TDRD9Q8NDG6 1382 aaKnown RBP14.03□□□□□ -0.16
TRAF6-203ENST00000529150 MAGI1Q96QZ7 1491 aaPredicted RBP14.02□□□□□ -0.16
TRAF6-203ENST00000529150 WRNQ14191 1432 aaPredicted RBP eCLIP14.02□□□□□ -0.16
TRAF6-203ENST00000529150 GRIN2BQ13224 1484 aa14.01□□□□□ -0.17
TRAF6-203ENST00000529150 SNAPC4Q5SXM2 1469 aa14□□□□□ -0.17
TRAF6-203ENST00000529150 RIMBP3CA6NJZ7 1639 aa13.99□□□□□ -0.17
TRAF6-203ENST00000529150 RIMBP3BA6NNM3 1639 aa13.99□□□□□ -0.17
TRAF6-203ENST00000529150 RIMBP3Q9UFD9 1639 aa13.99□□□□□ -0.17
TRAF6-203ENST00000529150 CLASP1Q7Z460 1538 aa13.98□□□□□ -0.17
TRAF6-203ENST00000529150 GAPVD1Q14C86 1478 aa13.98□□□□□ -0.17
TRAF6-203ENST00000529150 ARHGEF11O15085 1522 aa13.96□□□□□ -0.17
TRAF6-203ENST00000529150 SYNJ2O15056 1496 aa13.96□□□□□ -0.17
TRAF6-203ENST00000529150 ADAMTS12P58397 1594 aa13.92□□□□□ -0.18
TRAF6-203ENST00000529150 ERICH3Q5RHP9 1530 aa13.91□□□□□ -0.18
TRAF6-203ENST00000529150 GRIN2AQ12879 1464 aa13.86□□□□□ -0.19
TRAF6-203ENST00000529150 ARAP1Q96P48 1450 aa13.85□□□□□ -0.19
TRAF6-203ENST00000529150 NUP160Q12769 1436 aa13.84□□□□□ -0.19
TRAF6-203ENST00000529150 CEP170Q5SW79 1584 aa13.83□□□□□ -0.2
TRAF6-203ENST00000529150 FHAD1B1AJZ9 1412 aa13.82□□□□□ -0.2
TRAF6-203ENST00000529150 SHROOM2Q13796 1616 aa13.82□□□□□ -0.2
TRAF6-203ENST00000529150 CHMP7Q8WUX9 453 aaPredicted RBP13.8□□□□□ -0.2
TRAF6-203ENST00000529150 FBLN2P98095 1184 aa13.79□□□□□ -0.2
TRAF6-203ENST00000529150 CUL7Q14999 1698 aa13.76□□□□□ -0.21
TRAF6-203ENST00000529150 TRIM41Q8WV44 630 aa13.76□□□□□ -0.21
TRAF6-203ENST00000529150 RUSC2Q8N2Y8 1516 aa13.74□□□□□ -0.21
TRAF6-203ENST00000529150 KIF27Q86VH2 1401 aa13.72□□□□□ -0.21
TRAF6-203ENST00000529150 IGF1RP08069 1367 aa13.71□□□□□ -0.21
TRAF6-203ENST00000529150 ERCC6L2Q5T890 1561 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms