RNA–Protein interactions for RNA: ENST00000529131.5

C9orf135-206, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-206ENST00000529131 NISCHQ9Y2I1 1504 aa23.86■■□□□ 1.41
C9orf135-206ENST00000529131 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
C9orf135-206ENST00000529131 ABCC9O60706 1549 aa20.69■□□□□ 0.9
C9orf135-206ENST00000529131 RB1CC1Q8TDY2 1594 aa19.94■□□□□ 0.78
C9orf135-206ENST00000529131 NACADO15069 1562 aa19.93■□□□□ 0.78
C9orf135-206ENST00000529131 ZCCHC6Q5VYS8 1495 aaKnown RBP19.92■□□□□ 0.78
C9orf135-206ENST00000529131 MYO15BQ96JP2 1530 aa19.88■□□□□ 0.77
C9orf135-206ENST00000529131 DCAF1Q9Y4B6 1507 aa19.79■□□□□ 0.76
C9orf135-206ENST00000529131 UNC13AQ9UPW8 1703 aa19.66■□□□□ 0.74
C9orf135-206ENST00000529131 DCAF8L2P0C7V8 631 aa19.62■□□□□ 0.73
C9orf135-206ENST00000529131 BICRAQ9NZM4 1560 aa19.48■□□□□ 0.71
C9orf135-206ENST00000529131 SCRIBQ14160 1630 aa19.33■□□□□ 0.69
C9orf135-206ENST00000529131 PABPN1Q86U42 306 aaKnown RBP eCLIP19.26■□□□□ 0.67
C9orf135-206ENST00000529131 SHROOM4Q9ULL8 1493 aa19.19■□□□□ 0.66
C9orf135-206ENST00000529131 DNAJC5BQ9UF47 199 aa19.05■□□□□ 0.64
C9orf135-206ENST00000529131 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
C9orf135-206ENST00000529131 CC2D2AQ9P2K1 1620 aa18.8■□□□□ 0.6
C9orf135-206ENST00000529131 CECR2Q9BXF3 1484 aa18.6■□□□□ 0.57
C9orf135-206ENST00000529131 SMARCA4P51532 1647 aa18.55■□□□□ 0.56
C9orf135-206ENST00000529131 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
C9orf135-206ENST00000529131 AEBP2Q6ZN18 517 aaPredicted RBP18.42■□□□□ 0.54
C9orf135-206ENST00000529131 PEG3Q9GZU2 1588 aa18.42■□□□□ 0.54
C9orf135-206ENST00000529131 ATAD2BQ9ULI0 1458 aa18.41■□□□□ 0.54
C9orf135-206ENST00000529131 NCAPD3P42695 1498 aa18.4■□□□□ 0.54
C9orf135-206ENST00000529131 MROH2BQ7Z745 1585 aa18.4■□□□□ 0.54
C9orf135-206ENST00000529131 SMARCA2P51531 1590 aa18.36■□□□□ 0.53
C9orf135-206ENST00000529131 HMGXB3Q12766 1538 aa18.35■□□□□ 0.53
C9orf135-206ENST00000529131 WIZO95785 1651 aa18.22■□□□□ 0.51
C9orf135-206ENST00000529131 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
C9orf135-206ENST00000529131 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
C9orf135-206ENST00000529131 TOP2AP11388 1531 aaKnown RBP18■□□□□ 0.47
C9orf135-206ENST00000529131 NESP48681 1621 aa17.97■□□□□ 0.47
C9orf135-206ENST00000529131 LAMC3Q9Y6N6 1575 aa17.91■□□□□ 0.46
C9orf135-206ENST00000529131 KIF21AQ7Z4S6 1674 aa17.81■□□□□ 0.44
C9orf135-206ENST00000529131 CADPSQ9ULU8 1353 aa17.8■□□□□ 0.44
C9orf135-206ENST00000529131 THOC2Q8NI27 1593 aaKnown RBP17.79■□□□□ 0.44
C9orf135-206ENST00000529131 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
C9orf135-206ENST00000529131 CFTRP13569 1480 aa17.75■□□□□ 0.43
C9orf135-206ENST00000529131 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
C9orf135-206ENST00000529131 PRDM2Q13029 1718 aa17.72■□□□□ 0.43
C9orf135-206ENST00000529131 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
C9orf135-206ENST00000529131 CUX2O14529 1486 aa17.69■□□□□ 0.42
C9orf135-206ENST00000529131 FANCD2Q9BXW9 1451 aa17.62■□□□□ 0.41
C9orf135-206ENST00000529131 WDR62O43379 1518 aa17.6■□□□□ 0.41
C9orf135-206ENST00000529131 MRC2Q9UBG0 1479 aa17.58■□□□□ 0.41
C9orf135-206ENST00000529131 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.41
C9orf135-206ENST00000529131 URB2Q14146 1524 aaKnown RBP17.51■□□□□ 0.39
C9orf135-206ENST00000529131 SUPT5HO00267 1087 aaKnown RBP17.47■□□□□ 0.39
C9orf135-206ENST00000529131 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
C9orf135-206ENST00000529131 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
C9orf135-206ENST00000529131 CHIC1Q5VXU3 224 aa17.35■□□□□ 0.37
C9orf135-206ENST00000529131 ABCC8Q09428 1581 aa17.29■□□□□ 0.36
C9orf135-206ENST00000529131 CUX1P39880 1505 aa17.26■□□□□ 0.35
C9orf135-206ENST00000529131 TARBP1Q13395 1621 aaKnown RBP17.25■□□□□ 0.35
C9orf135-206ENST00000529131 POLA1P09884 1462 aaPredicted RBP17.23■□□□□ 0.35
C9orf135-206ENST00000529131 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
C9orf135-206ENST00000529131 ZNF608Q9ULD9 1512 aaPredicted RBP17.19■□□□□ 0.34
C9orf135-206ENST00000529131 WDR97A6NE52 1622 aa17.17■□□□□ 0.34
C9orf135-206ENST00000529131 FGD5Q6ZNL6 1462 aa17.16■□□□□ 0.34
C9orf135-206ENST00000529131 EIF4G3O43432 1585 aaKnown RBP17.15■□□□□ 0.34
C9orf135-206ENST00000529131 BIVM-ERCC5R4GMW8 1640 aa17.15■□□□□ 0.34
C9orf135-206ENST00000529131 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
C9orf135-206ENST00000529131 RAD54L2Q9Y4B4 1467 aa17.12■□□□□ 0.33
C9orf135-206ENST00000529131 TOP2BQ02880 1626 aa17.11■□□□□ 0.33
C9orf135-206ENST00000529131 DNAJC5Q9H3Z4 198 aa17.09■□□□□ 0.33
C9orf135-206ENST00000529131 SOGA1O94964 1423 aa17.06■□□□□ 0.32
C9orf135-206ENST00000529131 WRNQ14191 1432 aaPredicted RBP eCLIP17.06■□□□□ 0.32
C9orf135-206ENST00000529131 AQRO60306 1485 aaKnown RBP eCLIP17.04■□□□□ 0.32
C9orf135-206ENST00000529131 ABCA10Q8WWZ4 1543 aa17.02■□□□□ 0.32
C9orf135-206ENST00000529131 ABCA5Q8WWZ7 1642 aa17.02■□□□□ 0.31
C9orf135-206ENST00000529131 PBRM1Q86U86 1689 aa16.97■□□□□ 0.31
C9orf135-206ENST00000529131 TDRD9Q8NDG6 1382 aaKnown RBP16.97■□□□□ 0.31
C9orf135-206ENST00000529131 CHD1O14646 1710 aa16.96■□□□□ 0.3
C9orf135-206ENST00000529131 GRIN2BQ13224 1484 aa16.9■□□□□ 0.3
C9orf135-206ENST00000529131 GAPVD1Q14C86 1478 aa16.9■□□□□ 0.3
C9orf135-206ENST00000529131 SNAPC4Q5SXM2 1469 aa16.9■□□□□ 0.3
C9orf135-206ENST00000529131 MAGI1Q96QZ7 1491 aaPredicted RBP16.88■□□□□ 0.29
C9orf135-206ENST00000529131 ADAMTS12P58397 1594 aa16.83■□□□□ 0.28
C9orf135-206ENST00000529131 SYNJ2O15056 1496 aa16.81■□□□□ 0.28
C9orf135-206ENST00000529131 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
C9orf135-206ENST00000529131 OSCARQ8IYS5 282 aa16.8■□□□□ 0.28
C9orf135-206ENST00000529131 CLASP1Q7Z460 1538 aa16.79■□□□□ 0.28
C9orf135-206ENST00000529131 RIMBP3CA6NJZ7 1639 aa16.72■□□□□ 0.27
C9orf135-206ENST00000529131 RIMBP3BA6NNM3 1639 aa16.72■□□□□ 0.27
C9orf135-206ENST00000529131 RIMBP3Q9UFD9 1639 aa16.72■□□□□ 0.27
C9orf135-206ENST00000529131 GRIN2AQ12879 1464 aa16.72■□□□□ 0.27
C9orf135-206ENST00000529131 FHAD1B1AJZ9 1412 aa16.7■□□□□ 0.26
C9orf135-206ENST00000529131 CEP170Q5SW79 1584 aa16.69■□□□□ 0.26
C9orf135-206ENST00000529131 ARHGEF11O15085 1522 aa16.69■□□□□ 0.26
C9orf135-206ENST00000529131 NUP160Q12769 1436 aa16.68■□□□□ 0.26
C9orf135-206ENST00000529131 KIF27Q86VH2 1401 aa16.67■□□□□ 0.26
C9orf135-206ENST00000529131 CUL7Q14999 1698 aa16.66■□□□□ 0.26
C9orf135-206ENST00000529131 IGF1RP08069 1367 aa16.65■□□□□ 0.26
C9orf135-206ENST00000529131 FBLN2P98095 1184 aa16.65■□□□□ 0.26
C9orf135-206ENST00000529131 CHMP7Q8WUX9 453 aaPredicted RBP16.65■□□□□ 0.26
C9orf135-206ENST00000529131 RUSC2Q8N2Y8 1516 aa16.62■□□□□ 0.25
C9orf135-206ENST00000529131 SHROOM2Q13796 1616 aa16.62■□□□□ 0.25
C9orf135-206ENST00000529131 ARAP1Q96P48 1450 aa16.58■□□□□ 0.24
C9orf135-206ENST00000529131 ERCC6L2Q5T890 1561 aa16.55■□□□□ 0.24
C9orf135-206ENST00000529131 CARMIL1Q5VZK9 1371 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms