RNA–Protein interactions for RNA: ENST00000528916.1

PARVA-203, Transcript of parvin alpha, humanhuman

TSL 5

Gene PARVA, Length 897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVA-203ENST00000528916 NISCHQ9Y2I1 1504 aa24■■□□□ 1.43
PARVA-203ENST00000528916 ABCC9O60706 1549 aa22.48■■□□□ 1.19
PARVA-203ENST00000528916 CCDC180Q9P1Z9 1646 aa21.78■■□□□ 1.08
PARVA-203ENST00000528916 DNAJC5BQ9UF47 199 aa21.78■■□□□ 1.08
PARVA-203ENST00000528916 RB1CC1Q8TDY2 1594 aa21.1■□□□□ 0.97
PARVA-203ENST00000528916 PABPN1Q86U42 306 aaKnown RBP eCLIP20.87■□□□□ 0.93
PARVA-203ENST00000528916 NACADO15069 1562 aa20.8■□□□□ 0.92
PARVA-203ENST00000528916 DCAF8L2P0C7V8 631 aa20.59■□□□□ 0.89
PARVA-203ENST00000528916 UNC13AQ9UPW8 1703 aa20.56■□□□□ 0.88
PARVA-203ENST00000528916 DNAJC5Q9H3Z4 198 aa20.52■□□□□ 0.88
PARVA-203ENST00000528916 BICRAQ9NZM4 1560 aa20.51■□□□□ 0.87
PARVA-203ENST00000528916 CECR2Q9BXF3 1484 aa20.35■□□□□ 0.85
PARVA-203ENST00000528916 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
PARVA-203ENST00000528916 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.83
PARVA-203ENST00000528916 SHROOM4Q9ULL8 1493 aa20.19■□□□□ 0.82
PARVA-203ENST00000528916 EIF4G1Q04637 1599 aaKnown RBP20.06■□□□□ 0.8
PARVA-203ENST00000528916 DCAF1Q9Y4B6 1507 aa19.8■□□□□ 0.76
PARVA-203ENST00000528916 SCRIBQ14160 1630 aa19.79■□□□□ 0.76
PARVA-203ENST00000528916 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
PARVA-203ENST00000528916 CUX2O14529 1486 aa19.68■□□□□ 0.74
PARVA-203ENST00000528916 ERCC6Q03468 1493 aa19.46■□□□□ 0.71
PARVA-203ENST00000528916 TRIM41Q8WV44 630 aa19.27■□□□□ 0.68
PARVA-203ENST00000528916 NCAPD3P42695 1498 aa19.25■□□□□ 0.67
PARVA-203ENST00000528916 NESP48681 1621 aa19.12■□□□□ 0.65
PARVA-203ENST00000528916 ATAD2BQ9ULI0 1458 aa19.07■□□□□ 0.64
PARVA-203ENST00000528916 THOC2Q8NI27 1593 aaKnown RBP19.02■□□□□ 0.64
PARVA-203ENST00000528916 HMGXB3Q12766 1538 aa18.99■□□□□ 0.63
PARVA-203ENST00000528916 SMARCA2P51531 1590 aa18.96■□□□□ 0.63
PARVA-203ENST00000528916 LAMC3Q9Y6N6 1575 aa18.88■□□□□ 0.61
PARVA-203ENST00000528916 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.61
PARVA-203ENST00000528916 SMARCA4P51532 1647 aa18.83■□□□□ 0.61
PARVA-203ENST00000528916 BAZ1BQ9UIG0 1483 aaKnown RBP18.82■□□□□ 0.6
PARVA-203ENST00000528916 KIF21AQ7Z4S6 1674 aa18.79■□□□□ 0.6
PARVA-203ENST00000528916 OSCARQ8IYS5 282 aa18.73■□□□□ 0.59
PARVA-203ENST00000528916 PEG3Q9GZU2 1588 aa18.68■□□□□ 0.58
PARVA-203ENST00000528916 MRC2Q9UBG0 1479 aa18.67■□□□□ 0.58
PARVA-203ENST00000528916 BAZ1AQ9NRL2 1556 aaPredicted RBP18.67■□□□□ 0.58
PARVA-203ENST00000528916 WDR62O43379 1518 aa18.64■□□□□ 0.58
PARVA-203ENST00000528916 CADPSQ9ULU8 1353 aa18.64■□□□□ 0.57
PARVA-203ENST00000528916 MROH2BQ7Z745 1585 aa18.47■□□□□ 0.55
PARVA-203ENST00000528916 RIMBP3CA6NJZ7 1639 aa18.46■□□□□ 0.55
PARVA-203ENST00000528916 RIMBP3BA6NNM3 1639 aa18.46■□□□□ 0.55
PARVA-203ENST00000528916 RIMBP3Q9UFD9 1639 aa18.46■□□□□ 0.55
PARVA-203ENST00000528916 CEP164Q9UPV0 1460 aa18.46■□□□□ 0.54
PARVA-203ENST00000528916 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.53
PARVA-203ENST00000528916 ARHGEF11O15085 1522 aa18.35■□□□□ 0.53
PARVA-203ENST00000528916 TRHP20396 242 aaPredicted RBP18.32■□□□□ 0.52
PARVA-203ENST00000528916 CYB5RLQ6IPT4 315 aa18.32■□□□□ 0.52
PARVA-203ENST00000528916 AEBP2Q6ZN18 517 aaPredicted RBP18.29■□□□□ 0.52
PARVA-203ENST00000528916 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
PARVA-203ENST00000528916 CFTRP13569 1480 aa18.26■□□□□ 0.51
PARVA-203ENST00000528916 WIZO95785 1651 aa18.18■□□□□ 0.5
PARVA-203ENST00000528916 ZNF608Q9ULD9 1512 aaPredicted RBP18.17■□□□□ 0.5
PARVA-203ENST00000528916 IFT140Q96RY7 1462 aa18.14■□□□□ 0.5
PARVA-203ENST00000528916 ARAP1Q96P48 1450 aa18.13■□□□□ 0.49
PARVA-203ENST00000528916 RSF1Q96T23 1441 aaPredicted RBP18.05■□□□□ 0.48
PARVA-203ENST00000528916 EIF4G3O43432 1585 aaKnown RBP17.98■□□□□ 0.47
PARVA-203ENST00000528916 CHD1O14646 1710 aa17.96■□□□□ 0.47
PARVA-203ENST00000528916 FBLN2P98095 1184 aa17.96■□□□□ 0.47
PARVA-203ENST00000528916 TOPBP1Q92547 1522 aa17.96■□□□□ 0.47
PARVA-203ENST00000528916 AQRO60306 1485 aaKnown RBP eCLIP17.93■□□□□ 0.46
PARVA-203ENST00000528916 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
PARVA-203ENST00000528916 PRDM2Q13029 1718 aa17.91■□□□□ 0.46
PARVA-203ENST00000528916 ABCC8Q09428 1581 aa17.91■□□□□ 0.46
PARVA-203ENST00000528916 TARBP1Q13395 1621 aaKnown RBP17.83■□□□□ 0.45
PARVA-203ENST00000528916 DNMBPQ6XZF7 1577 aa17.81■□□□□ 0.44
PARVA-203ENST00000528916 CLASP1Q7Z460 1538 aa17.78■□□□□ 0.44
PARVA-203ENST00000528916 CCDC88BA6NC98 1476 aa17.76■□□□□ 0.43
PARVA-203ENST00000528916 CHMP7Q8WUX9 453 aaPredicted RBP17.74■□□□□ 0.43
PARVA-203ENST00000528916 TDRD9Q8NDG6 1382 aaKnown RBP17.73■□□□□ 0.43
PARVA-203ENST00000528916 POLA1P09884 1462 aaPredicted RBP17.73■□□□□ 0.43
PARVA-203ENST00000528916 SYNJ1O43426 1573 aa17.71■□□□□ 0.43
PARVA-203ENST00000528916 SNAPC4Q5SXM2 1469 aa17.69■□□□□ 0.42
PARVA-203ENST00000528916 RAD54L2Q9Y4B4 1467 aa17.69■□□□□ 0.42
PARVA-203ENST00000528916 GAPVD1Q14C86 1478 aa17.68■□□□□ 0.42
PARVA-203ENST00000528916 SOGA1O94964 1423 aa17.67■□□□□ 0.42
PARVA-203ENST00000528916 MAGI1Q96QZ7 1491 aaPredicted RBP17.64■□□□□ 0.41
PARVA-203ENST00000528916 WDR97A6NE52 1622 aa17.61■□□□□ 0.41
PARVA-203ENST00000528916 ILDR1Q86SU0 546 aaPredicted RBP17.6■□□□□ 0.41
PARVA-203ENST00000528916 SYNJ2O15056 1496 aa17.59■□□□□ 0.41
PARVA-203ENST00000528916 GRIN2BQ13224 1484 aa17.58■□□□□ 0.41
PARVA-203ENST00000528916 FGD5Q6ZNL6 1462 aa17.51■□□□□ 0.39
PARVA-203ENST00000528916 ERCC6L2Q5T890 1561 aa17.45■□□□□ 0.38
PARVA-203ENST00000528916 KDM4FA0A1W2PPD8 638 aa17.43■□□□□ 0.38
PARVA-203ENST00000528916 KIF13AQ9H1H9 1805 aa17.42■□□□□ 0.38
PARVA-203ENST00000528916 CUX1P39880 1505 aa17.39■□□□□ 0.37
PARVA-203ENST00000528916 PBRM1Q86U86 1689 aa17.38■□□□□ 0.37
PARVA-203ENST00000528916 CEP170Q5SW79 1584 aa17.36■□□□□ 0.37
PARVA-203ENST00000528916 FAM69CQ0P6D2 419 aa17.35■□□□□ 0.37
PARVA-203ENST00000528916 GRIN2AQ12879 1464 aa17.34■□□□□ 0.37
PARVA-203ENST00000528916 NUP160Q12769 1436 aa17.33■□□□□ 0.36
PARVA-203ENST00000528916 ABCC10Q5T3U5 1492 aa17.31■□□□□ 0.36
PARVA-203ENST00000528916 ABCA10Q8WWZ4 1543 aa17.3■□□□□ 0.36
PARVA-203ENST00000528916 SHROOM2Q13796 1616 aa17.29■□□□□ 0.36
PARVA-203ENST00000528916 ABCA5Q8WWZ7 1642 aa17.29■□□□□ 0.36
PARVA-203ENST00000528916 NPM1P06748 294 aaKnown RBP eCLIP17.25■□□□□ 0.35
PARVA-203ENST00000528916 KDM6BO15054 1643 aa17.22■□□□□ 0.35
PARVA-203ENST00000528916 PRG4Q92954 1404 aaPredicted RBP17.21■□□□□ 0.35
PARVA-203ENST00000528916 MAPKBP1O60336 1514 aa17.21■□□□□ 0.34
PARVA-203ENST00000528916 ADAMTS12P58397 1594 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms