RNA–Protein interactions for RNA: ENST00000528878.1

ERV3-1-202, Transcript of endogenous retrovirus group 3 member 1, envelope, humanhuman

TSL 2

Gene ERV3-1, Length 1,729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERV3-1-202ENST00000528878 NISCHQ9Y2I1 1504 aa28.01■■■□□ 2.07
ERV3-1-202ENST00000528878 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
ERV3-1-202ENST00000528878 ABCC9O60706 1549 aa24.55■■□□□ 1.52
ERV3-1-202ENST00000528878 AEBP2Q6ZN18 517 aaPredicted RBP24.03■■□□□ 1.44
ERV3-1-202ENST00000528878 RB1CC1Q8TDY2 1594 aa23.56■■□□□ 1.36
ERV3-1-202ENST00000528878 DCAF8L2P0C7V8 631 aa23.53■■□□□ 1.36
ERV3-1-202ENST00000528878 NACADO15069 1562 aa23.47■■□□□ 1.35
ERV3-1-202ENST00000528878 CHIC1Q5VXU3 224 aa23.42■■□□□ 1.34
ERV3-1-202ENST00000528878 ZCCHC6Q5VYS8 1495 aaKnown RBP23.31■■□□□ 1.32
ERV3-1-202ENST00000528878 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
ERV3-1-202ENST00000528878 DCAF1Q9Y4B6 1507 aa23.12■■□□□ 1.29
ERV3-1-202ENST00000528878 UNC13AQ9UPW8 1703 aa23.11■■□□□ 1.29
ERV3-1-202ENST00000528878 PABPN1Q86U42 306 aaKnown RBP eCLIP22.9■■□□□ 1.26
ERV3-1-202ENST00000528878 SCRIBQ14160 1630 aa22.84■■□□□ 1.25
ERV3-1-202ENST00000528878 BICRAQ9NZM4 1560 aa22.82■■□□□ 1.24
ERV3-1-202ENST00000528878 DNAJC5BQ9UF47 199 aa22.54■■□□□ 1.2
ERV3-1-202ENST00000528878 SHROOM4Q9ULL8 1493 aa22.52■■□□□ 1.19
ERV3-1-202ENST00000528878 EIF4G1Q04637 1599 aaKnown RBP22.25■■□□□ 1.15
ERV3-1-202ENST00000528878 CC2D2AQ9P2K1 1620 aa22.2■■□□□ 1.14
ERV3-1-202ENST00000528878 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
ERV3-1-202ENST00000528878 SMARCA4P51532 1647 aa21.79■■□□□ 1.08
ERV3-1-202ENST00000528878 BAZ1AQ9NRL2 1556 aaPredicted RBP21.73■■□□□ 1.07
ERV3-1-202ENST00000528878 ATAD2BQ9ULI0 1458 aa21.65■■□□□ 1.06
ERV3-1-202ENST00000528878 SMARCA2P51531 1590 aa21.64■■□□□ 1.06
ERV3-1-202ENST00000528878 NCAPD3P42695 1498 aa21.61■■□□□ 1.05
ERV3-1-202ENST00000528878 MROH2BQ7Z745 1585 aa21.6■■□□□ 1.05
ERV3-1-202ENST00000528878 HMGXB3Q12766 1538 aa21.54■■□□□ 1.04
ERV3-1-202ENST00000528878 PEG3Q9GZU2 1588 aa21.52■■□□□ 1.04
ERV3-1-202ENST00000528878 BAZ1BQ9UIG0 1483 aaKnown RBP21.51■■□□□ 1.03
ERV3-1-202ENST00000528878 WIZO95785 1651 aa21.42■■□□□ 1.02
ERV3-1-202ENST00000528878 RSF1Q96T23 1441 aaPredicted RBP21.28■■□□□ 1
ERV3-1-202ENST00000528878 NESP48681 1621 aa21.2■□□□□ 0.98
ERV3-1-202ENST00000528878 ERCC6Q03468 1493 aa21.18■□□□□ 0.98
ERV3-1-202ENST00000528878 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.97
ERV3-1-202ENST00000528878 LAMC3Q9Y6N6 1575 aa21.13■□□□□ 0.97
ERV3-1-202ENST00000528878 KIF21AQ7Z4S6 1674 aa21.03■□□□□ 0.96
ERV3-1-202ENST00000528878 CADPSQ9ULU8 1353 aa21■□□□□ 0.95
ERV3-1-202ENST00000528878 PDS5BQ9NTI5 1447 aa20.96■□□□□ 0.95
ERV3-1-202ENST00000528878 CUX2O14529 1486 aa20.92■□□□□ 0.94
ERV3-1-202ENST00000528878 THOC2Q8NI27 1593 aaKnown RBP20.91■□□□□ 0.94
ERV3-1-202ENST00000528878 CCDC88BA6NC98 1476 aa20.87■□□□□ 0.93
ERV3-1-202ENST00000528878 CFTRP13569 1480 aa20.85■□□□□ 0.93
ERV3-1-202ENST00000528878 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
ERV3-1-202ENST00000528878 FANCD2Q9BXW9 1451 aa20.8■□□□□ 0.92
ERV3-1-202ENST00000528878 CEP164Q9UPV0 1460 aa20.8■□□□□ 0.92
ERV3-1-202ENST00000528878 SUPT5HO00267 1087 aaKnown RBP20.78■□□□□ 0.92
ERV3-1-202ENST00000528878 MRC2Q9UBG0 1479 aa20.76■□□□□ 0.91
ERV3-1-202ENST00000528878 WDR62O43379 1518 aa20.7■□□□□ 0.9
ERV3-1-202ENST00000528878 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
ERV3-1-202ENST00000528878 URB2Q14146 1524 aaKnown RBP20.59■□□□□ 0.89
ERV3-1-202ENST00000528878 TOPBP1Q92547 1522 aa20.46■□□□□ 0.87
ERV3-1-202ENST00000528878 DNMBPQ6XZF7 1577 aa20.44■□□□□ 0.86
ERV3-1-202ENST00000528878 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
ERV3-1-202ENST00000528878 SENP3Q9H4L4 574 aaPredicted RBP20.37■□□□□ 0.85
ERV3-1-202ENST00000528878 DNAJC5Q9H3Z4 198 aa20.35■□□□□ 0.85
ERV3-1-202ENST00000528878 IFT140Q96RY7 1462 aa20.34■□□□□ 0.85
ERV3-1-202ENST00000528878 POLA1P09884 1462 aaPredicted RBP20.27■□□□□ 0.84
ERV3-1-202ENST00000528878 CUX1P39880 1505 aa20.27■□□□□ 0.84
ERV3-1-202ENST00000528878 ZNF608Q9ULD9 1512 aaPredicted RBP20.27■□□□□ 0.84
ERV3-1-202ENST00000528878 TARBP1Q13395 1621 aaKnown RBP20.25■□□□□ 0.83
ERV3-1-202ENST00000528878 EIF4G3O43432 1585 aaKnown RBP20.24■□□□□ 0.83
ERV3-1-202ENST00000528878 FGD5Q6ZNL6 1462 aa20.23■□□□□ 0.83
ERV3-1-202ENST00000528878 RAD54L2Q9Y4B4 1467 aa20.2■□□□□ 0.82
ERV3-1-202ENST00000528878 SOGA1O94964 1423 aa20.18■□□□□ 0.82
ERV3-1-202ENST00000528878 AQRO60306 1485 aaKnown RBP eCLIP20.14■□□□□ 0.822e-11■■■□□ 18.6
ERV3-1-202ENST00000528878 BIVM-ERCC5R4GMW8 1640 aa20.11■□□□□ 0.81
ERV3-1-202ENST00000528878 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
ERV3-1-202ENST00000528878 WDR97A6NE52 1622 aa20.1■□□□□ 0.81
ERV3-1-202ENST00000528878 SYNJ1O43426 1573 aa20.09■□□□□ 0.81
ERV3-1-202ENST00000528878 TDRD9Q8NDG6 1382 aaKnown RBP20.09■□□□□ 0.81
ERV3-1-202ENST00000528878 TOP2BQ02880 1626 aa20.08■□□□□ 0.81
ERV3-1-202ENST00000528878 CHD1O14646 1710 aa20.04■□□□□ 0.8
ERV3-1-202ENST00000528878 OSCARQ8IYS5 282 aa20.04■□□□□ 0.8
ERV3-1-202ENST00000528878 PBRM1Q86U86 1689 aa20.02■□□□□ 0.8
ERV3-1-202ENST00000528878 ABCA10Q8WWZ4 1543 aa20■□□□□ 0.79
ERV3-1-202ENST00000528878 SNAPC4Q5SXM2 1469 aa19.97■□□□□ 0.79
ERV3-1-202ENST00000528878 FBLN2P98095 1184 aa19.97■□□□□ 0.79
ERV3-1-202ENST00000528878 ABCA5Q8WWZ7 1642 aa19.96■□□□□ 0.79
ERV3-1-202ENST00000528878 GRIN2BQ13224 1484 aa19.96■□□□□ 0.79
ERV3-1-202ENST00000528878 GAPVD1Q14C86 1478 aa19.96■□□□□ 0.79
ERV3-1-202ENST00000528878 MAGI1Q96QZ7 1491 aaPredicted RBP19.91■□□□□ 0.78
ERV3-1-202ENST00000528878 CHMP7Q8WUX9 453 aaPredicted RBP19.86■□□□□ 0.77
ERV3-1-202ENST00000528878 SYNJ2O15056 1496 aa19.84■□□□□ 0.77
ERV3-1-202ENST00000528878 RIMBP3CA6NJZ7 1639 aa19.8■□□□□ 0.76
ERV3-1-202ENST00000528878 RIMBP3BA6NNM3 1639 aa19.8■□□□□ 0.76
ERV3-1-202ENST00000528878 RIMBP3Q9UFD9 1639 aa19.8■□□□□ 0.76
ERV3-1-202ENST00000528878 ADAMTS12P58397 1594 aa19.79■□□□□ 0.76
ERV3-1-202ENST00000528878 ERICH3Q5RHP9 1530 aa19.77■□□□□ 0.76
ERV3-1-202ENST00000528878 TRIM41Q8WV44 630 aa19.76■□□□□ 0.75
ERV3-1-202ENST00000528878 ARHGEF11O15085 1522 aa19.74■□□□□ 0.75
ERV3-1-202ENST00000528878 CLASP1Q7Z460 1538 aa19.73■□□□□ 0.75
ERV3-1-202ENST00000528878 GRIN2AQ12879 1464 aa19.71■□□□□ 0.75
ERV3-1-202ENST00000528878 FHAD1B1AJZ9 1412 aa19.7■□□□□ 0.74
ERV3-1-202ENST00000528878 KIF27Q86VH2 1401 aa19.68■□□□□ 0.74
ERV3-1-202ENST00000528878 CEP170Q5SW79 1584 aa19.64■□□□□ 0.74
ERV3-1-202ENST00000528878 CUL7Q14999 1698 aa19.62■□□□□ 0.73
ERV3-1-202ENST00000528878 NUP160Q12769 1436 aa19.59■□□□□ 0.73
ERV3-1-202ENST00000528878 IGF1RP08069 1367 aa19.57■□□□□ 0.72
ERV3-1-202ENST00000528878 CYB5RLQ6IPT4 315 aa19.57■□□□□ 0.72
ERV3-1-202ENST00000528878 ARAP1Q96P48 1450 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms