RNA–Protein interactions for RNA: ENST00000528740.1

APOL3-216, Transcript of apolipoprotein L3, humanhuman

TSL 3

Gene APOL3, Length 361 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL3-216ENST00000528740 NISCHQ9Y2I1 1504 aa30.13■■■□□ 2.41
APOL3-216ENST00000528740 ABCC9O60706 1549 aa27.77■■■□□ 2.04
APOL3-216ENST00000528740 CCDC180Q9P1Z9 1646 aa27.25■■□□□ 1.95
APOL3-216ENST00000528740 DNAJC5BQ9UF47 199 aa26.46■■□□□ 1.83
APOL3-216ENST00000528740 RB1CC1Q8TDY2 1594 aa26.17■■□□□ 1.78
APOL3-216ENST00000528740 NACADO15069 1562 aa25.85■■□□□ 1.73
APOL3-216ENST00000528740 PABPN1Q86U42 306 aaKnown RBP eCLIP25.77■■□□□ 1.72
APOL3-216ENST00000528740 DCAF8L2P0C7V8 631 aa25.69■■□□□ 1.7
APOL3-216ENST00000528740 UNC13AQ9UPW8 1703 aa25.65■■□□□ 1.7
APOL3-216ENST00000528740 BICRAQ9NZM4 1560 aa25.45■■□□□ 1.66
APOL3-216ENST00000528740 MYO15BQ96JP2 1530 aa25.29■■□□□ 1.64
APOL3-216ENST00000528740 CC2D2AQ9P2K1 1620 aa25.04■■□□□ 1.6
APOL3-216ENST00000528740 CECR2Q9BXF3 1484 aa25.03■■□□□ 1.6
APOL3-216ENST00000528740 SHROOM4Q9ULL8 1493 aa24.96■■□□□ 1.59
APOL3-216ENST00000528740 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.58
APOL3-216ENST00000528740 SCRIBQ14160 1630 aa24.86■■□□□ 1.57
APOL3-216ENST00000528740 EIF4G1Q04637 1599 aaKnown RBP24.86■■□□□ 1.57
APOL3-216ENST00000528740 DCAF1Q9Y4B6 1507 aa24.81■■□□□ 1.56
APOL3-216ENST00000528740 DNAJC5Q9H3Z4 198 aa24.59■■□□□ 1.53
APOL3-216ENST00000528740 CUX2O14529 1486 aa24.07■■□□□ 1.44
APOL3-216ENST00000528740 ERCC6Q03468 1493 aa23.98■■□□□ 1.43
APOL3-216ENST00000528740 NCAPD3P42695 1498 aa23.87■■□□□ 1.41
APOL3-216ENST00000528740 ATAD2BQ9ULI0 1458 aa23.76■■□□□ 1.39
APOL3-216ENST00000528740 NESP48681 1621 aa23.73■■□□□ 1.39
APOL3-216ENST00000528740 HMGXB3Q12766 1538 aa23.66■■□□□ 1.38
APOL3-216ENST00000528740 SMARCA2P51531 1590 aa23.65■■□□□ 1.38
APOL3-216ENST00000528740 SMARCA4P51532 1647 aa23.64■■□□□ 1.38
APOL3-216ENST00000528740 THOC2Q8NI27 1593 aaKnown RBP23.57■■□□□ 1.36
APOL3-216ENST00000528740 BAZ1BQ9UIG0 1483 aaKnown RBP23.51■■□□□ 1.35
APOL3-216ENST00000528740 LAMC3Q9Y6N6 1575 aa23.43■■□□□ 1.34
APOL3-216ENST00000528740 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
APOL3-216ENST00000528740 KIF21AQ7Z4S6 1674 aa23.41■■□□□ 1.34
APOL3-216ENST00000528740 TRIM41Q8WV44 630 aa23.39■■□□□ 1.33
APOL3-216ENST00000528740 PEG3Q9GZU2 1588 aa23.36■■□□□ 1.33
APOL3-216ENST00000528740 PDS5BQ9NTI5 1447 aa23.29■■□□□ 1.32
APOL3-216ENST00000528740 MROH2BQ7Z745 1585 aa23.25■■□□□ 1.31
APOL3-216ENST00000528740 MRC2Q9UBG0 1479 aa23.15■■□□□ 1.3
APOL3-216ENST00000528740 CADPSQ9ULU8 1353 aa23.13■■□□□ 1.29
APOL3-216ENST00000528740 WDR62O43379 1518 aa23.11■■□□□ 1.29
APOL3-216ENST00000528740 WIZO95785 1651 aa22.97■■□□□ 1.27
APOL3-216ENST00000528740 CEP164Q9UPV0 1460 aa22.97■■□□□ 1.27
APOL3-216ENST00000528740 FANCD2Q9BXW9 1451 aa22.9■■□□□ 1.26
APOL3-216ENST00000528740 OSCARQ8IYS5 282 aa22.88■■□□□ 1.25
APOL3-216ENST00000528740 RSF1Q96T23 1441 aaPredicted RBP22.86■■□□□ 1.25
APOL3-216ENST00000528740 CFTRP13569 1480 aa22.77■■□□□ 1.24
APOL3-216ENST00000528740 URB2Q14146 1524 aaKnown RBP22.75■■□□□ 1.23
APOL3-216ENST00000528740 RIMBP3CA6NJZ7 1639 aa22.71■■□□□ 1.23
APOL3-216ENST00000528740 RIMBP3BA6NNM3 1639 aa22.71■■□□□ 1.23
APOL3-216ENST00000528740 RIMBP3Q9UFD9 1639 aa22.71■■□□□ 1.23
APOL3-216ENST00000528740 TOP2AP11388 1531 aaKnown RBP22.61■■□□□ 1.21
APOL3-216ENST00000528740 ARHGEF11O15085 1522 aa22.56■■□□□ 1.2
APOL3-216ENST00000528740 ZNF608Q9ULD9 1512 aaPredicted RBP22.56■■□□□ 1.2
APOL3-216ENST00000528740 PRDM2Q13029 1718 aa22.55■■□□□ 1.2
APOL3-216ENST00000528740 IFT140Q96RY7 1462 aa22.5■■□□□ 1.19
APOL3-216ENST00000528740 SUPT5HO00267 1087 aaKnown RBP22.5■■□□□ 1.19
APOL3-216ENST00000528740 EIF4G3O43432 1585 aaKnown RBP22.42■■□□□ 1.18
APOL3-216ENST00000528740 TOPBP1Q92547 1522 aa22.41■■□□□ 1.18
APOL3-216ENST00000528740 CYB5RLQ6IPT4 315 aa22.41■■□□□ 1.18
APOL3-216ENST00000528740 CHD1O14646 1710 aa22.37■■□□□ 1.17
APOL3-216ENST00000528740 CCDC88BA6NC98 1476 aa22.36■■□□□ 1.17
APOL3-216ENST00000528740 TRHP20396 242 aaPredicted RBP22.34■■□□□ 1.17
APOL3-216ENST00000528740 ARAP1Q96P48 1450 aa22.32■■□□□ 1.16
APOL3-216ENST00000528740 AQRO60306 1485 aaKnown RBP eCLIP22.29■■□□□ 1.16
APOL3-216ENST00000528740 DNMBPQ6XZF7 1577 aa22.29■■□□□ 1.16
APOL3-216ENST00000528740 ABCC8Q09428 1581 aa22.27■■□□□ 1.16
APOL3-216ENST00000528740 TARBP1Q13395 1621 aaKnown RBP22.26■■□□□ 1.15
APOL3-216ENST00000528740 FBLN2P98095 1184 aa22.24■■□□□ 1.15
APOL3-216ENST00000528740 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
APOL3-216ENST00000528740 RAD54L2Q9Y4B4 1467 aa22.11■■□□□ 1.13
APOL3-216ENST00000528740 TDRD9Q8NDG6 1382 aaKnown RBP22.07■■□□□ 1.12
APOL3-216ENST00000528740 CLASP1Q7Z460 1538 aa22.06■■□□□ 1.12
APOL3-216ENST00000528740 SNAPC4Q5SXM2 1469 aa22.05■■□□□ 1.12
APOL3-216ENST00000528740 AEBP2Q6ZN18 517 aaPredicted RBP22.03■■□□□ 1.12
APOL3-216ENST00000528740 SOGA1O94964 1423 aa22.03■■□□□ 1.12
APOL3-216ENST00000528740 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
APOL3-216ENST00000528740 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
APOL3-216ENST00000528740 CHMP7Q8WUX9 453 aaPredicted RBP21.96■■□□□ 1.11
APOL3-216ENST00000528740 WDR97A6NE52 1622 aa21.95■■□□□ 1.1
APOL3-216ENST00000528740 MAGI1Q96QZ7 1491 aaPredicted RBP21.92■■□□□ 1.1
APOL3-216ENST00000528740 GRIN2BQ13224 1484 aa21.89■■□□□ 1.09
APOL3-216ENST00000528740 SYNJ2O15056 1496 aa21.87■■□□□ 1.09
APOL3-216ENST00000528740 CUX1P39880 1505 aa21.86■■□□□ 1.09
APOL3-216ENST00000528740 GAPVD1Q14C86 1478 aa21.84■■□□□ 1.09
APOL3-216ENST00000528740 PBRM1Q86U86 1689 aa21.83■■□□□ 1.09
APOL3-216ENST00000528740 ERCC6L2Q5T890 1561 aa21.73■■□□□ 1.07
APOL3-216ENST00000528740 ABCA5Q8WWZ7 1642 aa21.69■■□□□ 1.06
APOL3-216ENST00000528740 ABCA10Q8WWZ4 1543 aa21.65■■□□□ 1.06
APOL3-216ENST00000528740 GRIN2AQ12879 1464 aa21.62■■□□□ 1.05
APOL3-216ENST00000528740 CEP170Q5SW79 1584 aa21.61■■□□□ 1.05
APOL3-216ENST00000528740 ADAMTS12P58397 1594 aa21.57■■□□□ 1.04
APOL3-216ENST00000528740 NUP160Q12769 1436 aa21.55■■□□□ 1.04
APOL3-216ENST00000528740 KIF13AQ9H1H9 1805 aa21.55■■□□□ 1.04
APOL3-216ENST00000528740 SHROOM2Q13796 1616 aa21.53■■□□□ 1.04
APOL3-216ENST00000528740 WRNQ14191 1432 aaPredicted RBP eCLIP21.5■■□□□ 1.03
APOL3-216ENST00000528740 FHAD1B1AJZ9 1412 aa21.45■■□□□ 1.02
APOL3-216ENST00000528740 TOP2BQ02880 1626 aa21.4■■□□□ 1.02
APOL3-216ENST00000528740 PRG4Q92954 1404 aaPredicted RBP21.4■■□□□ 1.02
APOL3-216ENST00000528740 BIVM-ERCC5R4GMW8 1640 aa21.39■■□□□ 1.01
APOL3-216ENST00000528740 ERICH3Q5RHP9 1530 aa21.36■■□□□ 1.01
APOL3-216ENST00000528740 CHIC1Q5VXU3 224 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms