RNA–Protein interactions for RNA: ENST00000528181.1

GRHL3-208, Transcript of grainyhead like transcription factor 3, humanhuman

TSL 3

Gene GRHL3, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRHL3-208ENST00000528181 NISCHQ9Y2I1 1504 aa22.24■■□□□ 1.15
GRHL3-208ENST00000528181 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
GRHL3-208ENST00000528181 ABCC9O60706 1549 aa19.36■□□□□ 0.69
GRHL3-208ENST00000528181 DCAF8L2P0C7V8 631 aa18.62■□□□□ 0.57
GRHL3-208ENST00000528181 RB1CC1Q8TDY2 1594 aa18.62■□□□□ 0.57
GRHL3-208ENST00000528181 NACADO15069 1562 aa18.59■□□□□ 0.57
GRHL3-208ENST00000528181 ZCCHC6Q5VYS8 1495 aaKnown RBP18.51■□□□□ 0.55
GRHL3-208ENST00000528181 MYO15BQ96JP2 1530 aa18.47■□□□□ 0.55
GRHL3-208ENST00000528181 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.54
GRHL3-208ENST00000528181 UNC13AQ9UPW8 1703 aa18.23■□□□□ 0.51
GRHL3-208ENST00000528181 PABPN1Q86U42 306 aaKnown RBP eCLIP18.11■□□□□ 0.49
GRHL3-208ENST00000528181 BICRAQ9NZM4 1560 aa18.06■□□□□ 0.48
GRHL3-208ENST00000528181 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
GRHL3-208ENST00000528181 SHROOM4Q9ULL8 1493 aa17.83■□□□□ 0.45
GRHL3-208ENST00000528181 DNAJC5BQ9UF47 199 aa17.81■□□□□ 0.44
GRHL3-208ENST00000528181 EIF4G1Q04637 1599 aaKnown RBP17.57■□□□□ 0.4
GRHL3-208ENST00000528181 CC2D2AQ9P2K1 1620 aa17.52■□□□□ 0.4
GRHL3-208ENST00000528181 CECR2Q9BXF3 1484 aa17.39■□□□□ 0.37
GRHL3-208ENST00000528181 SMARCA4P51532 1647 aa17.25■□□□□ 0.35
GRHL3-208ENST00000528181 BAZ1AQ9NRL2 1556 aaPredicted RBP17.23■□□□□ 0.35
GRHL3-208ENST00000528181 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
GRHL3-208ENST00000528181 NCAPD3P42695 1498 aa17.16■□□□□ 0.34
GRHL3-208ENST00000528181 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
GRHL3-208ENST00000528181 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
GRHL3-208ENST00000528181 PEG3Q9GZU2 1588 aa17.08■□□□□ 0.32
GRHL3-208ENST00000528181 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
GRHL3-208ENST00000528181 BAZ1BQ9UIG0 1483 aaKnown RBP17.02■□□□□ 0.32
GRHL3-208ENST00000528181 WIZO95785 1651 aa16.97■□□□□ 0.31
GRHL3-208ENST00000528181 RSF1Q96T23 1441 aaPredicted RBP16.95■□□□□ 0.3
GRHL3-208ENST00000528181 TOP2AP11388 1531 aaKnown RBP16.76■□□□□ 0.27
GRHL3-208ENST00000528181 NESP48681 1621 aa16.75■□□□□ 0.27
GRHL3-208ENST00000528181 LAMC3Q9Y6N6 1575 aa16.71■□□□□ 0.27
GRHL3-208ENST00000528181 ERCC6Q03468 1493 aa16.68■□□□□ 0.26
GRHL3-208ENST00000528181 CADPSQ9ULU8 1353 aa16.66■□□□□ 0.26
GRHL3-208ENST00000528181 PDS5BQ9NTI5 1447 aa16.6■□□□□ 0.25
GRHL3-208ENST00000528181 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
GRHL3-208ENST00000528181 KIF21AQ7Z4S6 1674 aa16.57■□□□□ 0.24
GRHL3-208ENST00000528181 CFTRP13569 1480 aa16.55■□□□□ 0.24
GRHL3-208ENST00000528181 SUPT5HO00267 1087 aaKnown RBP16.52■□□□□ 0.24
GRHL3-208ENST00000528181 CUX2O14529 1486 aa16.51■□□□□ 0.23
GRHL3-208ENST00000528181 THOC2Q8NI27 1593 aaKnown RBP16.49■□□□□ 0.23
GRHL3-208ENST00000528181 FANCD2Q9BXW9 1451 aa16.47■□□□□ 0.23
GRHL3-208ENST00000528181 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
GRHL3-208ENST00000528181 CEP164Q9UPV0 1460 aa16.45■□□□□ 0.22
GRHL3-208ENST00000528181 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
GRHL3-208ENST00000528181 WDR62O43379 1518 aa16.36■□□□□ 0.21
GRHL3-208ENST00000528181 URB2Q14146 1524 aaKnown RBP16.3■□□□□ 0.2
GRHL3-208ENST00000528181 ABCC8Q09428 1581 aa16.21■□□□□ 0.18
GRHL3-208ENST00000528181 TOPBP1Q92547 1522 aa16.2■□□□□ 0.18
GRHL3-208ENST00000528181 DNMBPQ6XZF7 1577 aa16.18■□□□□ 0.18
GRHL3-208ENST00000528181 IFT140Q96RY7 1462 aa16.1■□□□□ 0.17
GRHL3-208ENST00000528181 CUX1P39880 1505 aa16.09■□□□□ 0.17
GRHL3-208ENST00000528181 POLA1P09884 1462 aaPredicted RBP16.06■□□□□ 0.16
GRHL3-208ENST00000528181 DNAJC5Q9H3Z4 198 aa16.04■□□□□ 0.16
GRHL3-208ENST00000528181 TARBP1Q13395 1621 aaKnown RBP16.04■□□□□ 0.16
GRHL3-208ENST00000528181 ZNF608Q9ULD9 1512 aaPredicted RBP16.04■□□□□ 0.16
GRHL3-208ENST00000528181 FGD5Q6ZNL6 1462 aa16.02■□□□□ 0.15
GRHL3-208ENST00000528181 SOGA1O94964 1423 aa16.01■□□□□ 0.15
GRHL3-208ENST00000528181 RAD54L2Q9Y4B4 1467 aa16■□□□□ 0.15
GRHL3-208ENST00000528181 WRNQ14191 1432 aaPredicted RBP eCLIP15.97■□□□□ 0.15
GRHL3-208ENST00000528181 EIF4G3O43432 1585 aaKnown RBP15.96■□□□□ 0.15
GRHL3-208ENST00000528181 AQRO60306 1485 aaKnown RBP eCLIP15.96■□□□□ 0.14
GRHL3-208ENST00000528181 BIVM-ERCC5R4GMW8 1640 aa15.94■□□□□ 0.14
GRHL3-208ENST00000528181 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
GRHL3-208ENST00000528181 SYNJ1O43426 1573 aa15.93■□□□□ 0.14
GRHL3-208ENST00000528181 TDRD9Q8NDG6 1382 aaKnown RBP15.91■□□□□ 0.14
GRHL3-208ENST00000528181 WDR97A6NE52 1622 aa15.89■□□□□ 0.13
GRHL3-208ENST00000528181 ABCA10Q8WWZ4 1543 aa15.87■□□□□ 0.13
GRHL3-208ENST00000528181 OSCARQ8IYS5 282 aa15.84■□□□□ 0.13
GRHL3-208ENST00000528181 GAPVD1Q14C86 1478 aa15.82■□□□□ 0.12
GRHL3-208ENST00000528181 GRIN2BQ13224 1484 aa15.81■□□□□ 0.12
GRHL3-208ENST00000528181 ABCA5Q8WWZ7 1642 aa15.8■□□□□ 0.12
GRHL3-208ENST00000528181 PBRM1Q86U86 1689 aa15.79■□□□□ 0.12
GRHL3-208ENST00000528181 SNAPC4Q5SXM2 1469 aa15.79■□□□□ 0.12
GRHL3-208ENST00000528181 CHD1O14646 1710 aa15.79■□□□□ 0.12
GRHL3-208ENST00000528181 FBLN2P98095 1184 aa15.77■□□□□ 0.12
GRHL3-208ENST00000528181 MAGI1Q96QZ7 1491 aaPredicted RBP15.77■□□□□ 0.11
GRHL3-208ENST00000528181 CHMP7Q8WUX9 453 aaPredicted RBP15.72■□□□□ 0.11
GRHL3-208ENST00000528181 SYNJ2O15056 1496 aa15.71■□□□□ 0.1
GRHL3-208ENST00000528181 ERICH3Q5RHP9 1530 aa15.68■□□□□ 0.1
GRHL3-208ENST00000528181 ADAMTS12P58397 1594 aa15.65■□□□□ 0.1
GRHL3-208ENST00000528181 KIF27Q86VH2 1401 aa15.64■□□□□ 0.09
GRHL3-208ENST00000528181 FHAD1B1AJZ9 1412 aa15.63■□□□□ 0.09
GRHL3-208ENST00000528181 GRIN2AQ12879 1464 aa15.61■□□□□ 0.09
GRHL3-208ENST00000528181 TRIM41Q8WV44 630 aa15.6■□□□□ 0.09
GRHL3-208ENST00000528181 IGF1RP08069 1367 aa15.6■□□□□ 0.09
GRHL3-208ENST00000528181 CLASP1Q7Z460 1538 aa15.59■□□□□ 0.09
GRHL3-208ENST00000528181 RIMBP3CA6NJZ7 1639 aa15.59■□□□□ 0.09
GRHL3-208ENST00000528181 RIMBP3BA6NNM3 1639 aa15.59■□□□□ 0.09
GRHL3-208ENST00000528181 RIMBP3Q9UFD9 1639 aa15.59■□□□□ 0.09
GRHL3-208ENST00000528181 ARHGEF11O15085 1522 aa15.57■□□□□ 0.08
GRHL3-208ENST00000528181 CEP170Q5SW79 1584 aa15.53■□□□□ 0.08
GRHL3-208ENST00000528181 NUP160Q12769 1436 aa15.53■□□□□ 0.08
GRHL3-208ENST00000528181 CUL7Q14999 1698 aa15.53■□□□□ 0.08
GRHL3-208ENST00000528181 RUSC2Q8N2Y8 1516 aa15.51■□□□□ 0.07
GRHL3-208ENST00000528181 CARMIL1Q5VZK9 1371 aa15.49■□□□□ 0.07
GRHL3-208ENST00000528181 CYB5RLQ6IPT4 315 aa15.45■□□□□ 0.06
GRHL3-208ENST00000528181 ARAP1Q96P48 1450 aa15.45■□□□□ 0.06
GRHL3-208ENST00000528181 SHROOM2Q13796 1616 aa15.43■□□□□ 0.06
GRHL3-208ENST00000528181 CHIC1Q5VXU3 224 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms