RNA–Protein interactions for RNA: ENST00000528058.1

SIGIRR-211, Transcript of single Ig and TIR domain containing, humanhuman

TSL 4

Gene SIGIRR, Length 557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGIRR-211ENST00000528058 NISCHQ9Y2I1 1504 aa34.18■■■■□ 3.06
SIGIRR-211ENST00000528058 CCDC180Q9P1Z9 1646 aa30.18■■■□□ 2.42
SIGIRR-211ENST00000528058 ZCCHC6Q5VYS8 1495 aaKnown RBP28.67■■■□□ 2.18
SIGIRR-211ENST00000528058 ABCC9O60706 1549 aa28.63■■■□□ 2.17
SIGIRR-211ENST00000528058 DCAF1Q9Y4B6 1507 aa28.46■■■□□ 2.15
SIGIRR-211ENST00000528058 MYO15BQ96JP2 1530 aa28.37■■■□□ 2.13
SIGIRR-211ENST00000528058 NACADO15069 1562 aa28.18■■■□□ 2.1
SIGIRR-211ENST00000528058 RB1CC1Q8TDY2 1594 aa27.99■■■□□ 2.07
SIGIRR-211ENST00000528058 DCAF8L2P0C7V8 631 aa27.89■■■□□ 2.06
SIGIRR-211ENST00000528058 SCRIBQ14160 1630 aa27.4■■□□□ 1.98
SIGIRR-211ENST00000528058 UNC13AQ9UPW8 1703 aa27.32■■□□□ 1.96
SIGIRR-211ENST00000528058 DNAJC5BQ9UF47 199 aa27.16■■□□□ 1.94
SIGIRR-211ENST00000528058 BICRAQ9NZM4 1560 aa27.13■■□□□ 1.93
SIGIRR-211ENST00000528058 SHROOM4Q9ULL8 1493 aa27.12■■□□□ 1.93
SIGIRR-211ENST00000528058 PABPN1Q86U42 306 aaKnown RBP eCLIP26.77■■□□□ 1.88
SIGIRR-211ENST00000528058 BAZ1AQ9NRL2 1556 aaPredicted RBP26.46■■□□□ 1.83
SIGIRR-211ENST00000528058 CECR2Q9BXF3 1484 aa26.45■■□□□ 1.82
SIGIRR-211ENST00000528058 SMARCA4P51532 1647 aa26.38■■□□□ 1.81
SIGIRR-211ENST00000528058 EIF4G1Q04637 1599 aaKnown RBP26.34■■□□□ 1.81
SIGIRR-211ENST00000528058 MROH2BQ7Z745 1585 aa26.29■■□□□ 1.8
SIGIRR-211ENST00000528058 RSF1Q96T23 1441 aaPredicted RBP26.26■■□□□ 1.79
SIGIRR-211ENST00000528058 PEG3Q9GZU2 1588 aa26.23■■□□□ 1.79
SIGIRR-211ENST00000528058 SMARCA2P51531 1590 aa26.09■■□□□ 1.77
SIGIRR-211ENST00000528058 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
SIGIRR-211ENST00000528058 WIZO95785 1651 aa26.01■■□□□ 1.75
SIGIRR-211ENST00000528058 CC2D2AQ9P2K1 1620 aa26.01■■□□□ 1.75
SIGIRR-211ENST00000528058 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
SIGIRR-211ENST00000528058 HMGXB3Q12766 1538 aa25.96■■□□□ 1.75
SIGIRR-211ENST00000528058 TOP2AP11388 1531 aaKnown RBP25.88■■□□□ 1.73
SIGIRR-211ENST00000528058 SUPT5HO00267 1087 aaKnown RBP25.85■■□□□ 1.73
SIGIRR-211ENST00000528058 BAZ1BQ9UIG0 1483 aaKnown RBP25.84■■□□□ 1.73
SIGIRR-211ENST00000528058 DNAJC5Q9H3Z4 198 aa25.74■■□□□ 1.71
SIGIRR-211ENST00000528058 CCDC88BA6NC98 1476 aa25.5■■□□□ 1.67
SIGIRR-211ENST00000528058 CFTRP13569 1480 aa25.24■■□□□ 1.63
SIGIRR-211ENST00000528058 CADPSQ9ULU8 1353 aa25.19■■□□□ 1.62
SIGIRR-211ENST00000528058 LAMC3Q9Y6N6 1575 aa25.18■■□□□ 1.62
SIGIRR-211ENST00000528058 PRDM2Q13029 1718 aa25.13■■□□□ 1.61
SIGIRR-211ENST00000528058 NESP48681 1621 aa24.98■■□□□ 1.59
SIGIRR-211ENST00000528058 PDS5BQ9NTI5 1447 aa24.93■■□□□ 1.58
SIGIRR-211ENST00000528058 FANCD2Q9BXW9 1451 aa24.89■■□□□ 1.57
SIGIRR-211ENST00000528058 CEP164Q9UPV0 1460 aa24.81■■□□□ 1.56
SIGIRR-211ENST00000528058 KIF21AQ7Z4S6 1674 aa24.77■■□□□ 1.56
SIGIRR-211ENST00000528058 WRNQ14191 1432 aaPredicted RBP eCLIP24.73■■□□□ 1.55
SIGIRR-211ENST00000528058 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
SIGIRR-211ENST00000528058 BIVM-ERCC5R4GMW8 1640 aa24.68■■□□□ 1.54
SIGIRR-211ENST00000528058 TOP2BQ02880 1626 aa24.67■■□□□ 1.54
SIGIRR-211ENST00000528058 DNMBPQ6XZF7 1577 aa24.66■■□□□ 1.54
SIGIRR-211ENST00000528058 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
SIGIRR-211ENST00000528058 CUX1P39880 1505 aa24.65■■□□□ 1.54
SIGIRR-211ENST00000528058 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.54
SIGIRR-211ENST00000528058 ERCC6Q03468 1493 aa24.64■■□□□ 1.53
SIGIRR-211ENST00000528058 SYNJ1O43426 1573 aa24.63■■□□□ 1.53
SIGIRR-211ENST00000528058 CUX2O14529 1486 aa24.62■■□□□ 1.53
SIGIRR-211ENST00000528058 URB2Q14146 1524 aaKnown RBP24.61■■□□□ 1.53
SIGIRR-211ENST00000528058 THOC2Q8NI27 1593 aaKnown RBP24.6■■□□□ 1.53
SIGIRR-211ENST00000528058 WDR62O43379 1518 aa24.6■■□□□ 1.53
SIGIRR-211ENST00000528058 TOPBP1Q92547 1522 aa24.58■■□□□ 1.53
SIGIRR-211ENST00000528058 TRIM41Q8WV44 630 aa24.48■■□□□ 1.51
SIGIRR-211ENST00000528058 FGD5Q6ZNL6 1462 aa24.44■■□□□ 1.5
SIGIRR-211ENST00000528058 POLA1P09884 1462 aaPredicted RBP24.43■■□□□ 1.5
SIGIRR-211ENST00000528058 ABCA10Q8WWZ4 1543 aa24.31■■□□□ 1.48
SIGIRR-211ENST00000528058 TARBP1Q13395 1621 aaKnown RBP24.31■■□□□ 1.48
SIGIRR-211ENST00000528058 WDR97A6NE52 1622 aa24.3■■□□□ 1.48
SIGIRR-211ENST00000528058 IFT140Q96RY7 1462 aa24.29■■□□□ 1.48
SIGIRR-211ENST00000528058 SOGA1O94964 1423 aa24.27■■□□□ 1.48
SIGIRR-211ENST00000528058 EEA1Q15075 1411 aa24.25■■□□□ 1.47
SIGIRR-211ENST00000528058 RAD54L2Q9Y4B4 1467 aa24.21■■□□□ 1.47
SIGIRR-211ENST00000528058 KIF27Q86VH2 1401 aa24.17■■□□□ 1.46
SIGIRR-211ENST00000528058 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
SIGIRR-211ENST00000528058 RUSC2Q8N2Y8 1516 aa24.05■■□□□ 1.44
SIGIRR-211ENST00000528058 ERICH3Q5RHP9 1530 aa24.05■■□□□ 1.44
SIGIRR-211ENST00000528058 EIF4G3O43432 1585 aaKnown RBP24.04■■□□□ 1.44
SIGIRR-211ENST00000528058 GAPVD1Q14C86 1478 aa24.04■■□□□ 1.44
SIGIRR-211ENST00000528058 ZNF608Q9ULD9 1512 aaPredicted RBP24.03■■□□□ 1.44
SIGIRR-211ENST00000528058 TDRD9Q8NDG6 1382 aaKnown RBP24■■□□□ 1.43
SIGIRR-211ENST00000528058 GRIN2BQ13224 1484 aa23.98■■□□□ 1.43
SIGIRR-211ENST00000528058 PBRM1Q86U86 1689 aa23.96■■□□□ 1.43
SIGIRR-211ENST00000528058 IGF1RP08069 1367 aa23.96■■□□□ 1.43
SIGIRR-211ENST00000528058 CUL7Q14999 1698 aa23.95■■□□□ 1.43
SIGIRR-211ENST00000528058 AQRO60306 1485 aaKnown RBP eCLIP23.94■■□□□ 1.42
SIGIRR-211ENST00000528058 CSRNP3Q8WYN3 585 aa23.94■■□□□ 1.42
SIGIRR-211ENST00000528058 PRXQ9BXM0 1461 aa23.94■■□□□ 1.42
SIGIRR-211ENST00000528058 KIF21BO75037 1637 aa23.93■■□□□ 1.42
SIGIRR-211ENST00000528058 MAGI1Q96QZ7 1491 aaPredicted RBP23.89■■□□□ 1.42
SIGIRR-211ENST00000528058 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
SIGIRR-211ENST00000528058 FHAD1B1AJZ9 1412 aa23.83■■□□□ 1.4
SIGIRR-211ENST00000528058 CARMIL1Q5VZK9 1371 aa23.81■■□□□ 1.4
SIGIRR-211ENST00000528058 SNAPC4Q5SXM2 1469 aa23.81■■□□□ 1.4
SIGIRR-211ENST00000528058 FAM9AQ8IZU1 332 aaPredicted RBP23.8■■□□□ 1.4
SIGIRR-211ENST00000528058 GOLGA3Q08378 1498 aa23.79■■□□□ 1.4
SIGIRR-211ENST00000528058 RAPGEF2Q9Y4G8 1499 aa23.79■■□□□ 1.4
SIGIRR-211ENST00000528058 SYNJ2O15056 1496 aa23.75■■□□□ 1.39
SIGIRR-211ENST00000528058 GRIN2AQ12879 1464 aa23.67■■□□□ 1.38
SIGIRR-211ENST00000528058 TNIKQ9UKE5 1360 aa23.61■■□□□ 1.37
SIGIRR-211ENST00000528058 NUP160Q12769 1436 aa23.59■■□□□ 1.37
SIGIRR-211ENST00000528058 CTTNBP2Q8WZ74 1663 aa23.55■■□□□ 1.36
SIGIRR-211ENST00000528058 CHD1O14646 1710 aa23.55■■□□□ 1.36
SIGIRR-211ENST00000528058 CHMP7Q8WUX9 453 aaPredicted RBP23.53■■□□□ 1.36
SIGIRR-211ENST00000528058 CEP170Q5SW79 1584 aa23.51■■□□□ 1.35
SIGIRR-211ENST00000528058 LOC105371045A0A1W2PR82 267 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms