RNA–Protein interactions for RNA: ENST00000527945.2

LINC00958-203, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,121 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-203ENST00000527945 NISCHQ9Y2I1 1504 aa22.52■■□□□ 1.2
LINC00958-203ENST00000527945 CCDC180Q9P1Z9 1646 aa20.04■□□□□ 0.8
LINC00958-203ENST00000527945 ABCC9O60706 1549 aa19.82■□□□□ 0.76
LINC00958-203ENST00000527945 RB1CC1Q8TDY2 1594 aa19.01■□□□□ 0.63
LINC00958-203ENST00000527945 NACADO15069 1562 aa18.98■□□□□ 0.63
LINC00958-203ENST00000527945 MYO15BQ96JP2 1530 aa18.92■□□□□ 0.62
LINC00958-203ENST00000527945 ZCCHC6Q5VYS8 1495 aaKnown RBP18.82■□□□□ 0.6
LINC00958-203ENST00000527945 AEBP2Q6ZN18 517 aaPredicted RBP18.72■□□□□ 0.59
LINC00958-203ENST00000527945 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
LINC00958-203ENST00000527945 DCAF1Q9Y4B6 1507 aa18.68■□□□□ 0.58
LINC00958-203ENST00000527945 DNAJC5BQ9UF47 199 aa18.58■□□□□ 0.56
LINC00958-203ENST00000527945 UNC13AQ9UPW8 1703 aa18.53■□□□□ 0.56
LINC00958-203ENST00000527945 PABPN1Q86U42 306 aaKnown RBP eCLIP18.49■□□□□ 0.55
LINC00958-203ENST00000527945 BICRAQ9NZM4 1560 aa18.47■□□□□ 0.55
LINC00958-203ENST00000527945 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.54
LINC00958-203ENST00000527945 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
LINC00958-203ENST00000527945 EIF4G1Q04637 1599 aaKnown RBP17.99■□□□□ 0.47
LINC00958-203ENST00000527945 CC2D2AQ9P2K1 1620 aa17.94■□□□□ 0.46
LINC00958-203ENST00000527945 CECR2Q9BXF3 1484 aa17.91■□□□□ 0.46
LINC00958-203ENST00000527945 CHIC1Q5VXU3 224 aa17.64■□□□□ 0.41
LINC00958-203ENST00000527945 NCAPD3P42695 1498 aa17.59■□□□□ 0.41
LINC00958-203ENST00000527945 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
LINC00958-203ENST00000527945 ATAD2BQ9ULI0 1458 aa17.49■□□□□ 0.39
LINC00958-203ENST00000527945 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
LINC00958-203ENST00000527945 BAZ1AQ9NRL2 1556 aaPredicted RBP17.41■□□□□ 0.38
LINC00958-203ENST00000527945 HMGXB3Q12766 1538 aa17.41■□□□□ 0.38
LINC00958-203ENST00000527945 MROH2BQ7Z745 1585 aa17.4■□□□□ 0.38
LINC00958-203ENST00000527945 PEG3Q9GZU2 1588 aa17.39■□□□□ 0.37
LINC00958-203ENST00000527945 POTEDQ86YR6 584 aa17.35■□□□□ 0.37
LINC00958-203ENST00000527945 WIZO95785 1651 aa17.26■□□□□ 0.35
LINC00958-203ENST00000527945 BAZ1BQ9UIG0 1483 aaKnown RBP17.25■□□□□ 0.35
LINC00958-203ENST00000527945 RSF1Q96T23 1441 aaPredicted RBP17.19■□□□□ 0.34
LINC00958-203ENST00000527945 CUX2O14529 1486 aa17.17■□□□□ 0.34
LINC00958-203ENST00000527945 ERCC6Q03468 1493 aa17.1■□□□□ 0.33
LINC00958-203ENST00000527945 NESP48681 1621 aa17.08■□□□□ 0.32
LINC00958-203ENST00000527945 LAMC3Q9Y6N6 1575 aa17.06■□□□□ 0.32
LINC00958-203ENST00000527945 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.31
LINC00958-203ENST00000527945 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
LINC00958-203ENST00000527945 DNAJC5Q9H3Z4 198 aa17.01■□□□□ 0.31
LINC00958-203ENST00000527945 PDS5BQ9NTI5 1447 aa16.99■□□□□ 0.31
LINC00958-203ENST00000527945 THOC2Q8NI27 1593 aaKnown RBP16.91■□□□□ 0.3
LINC00958-203ENST00000527945 CFTRP13569 1480 aa16.87■□□□□ 0.29
LINC00958-203ENST00000527945 CCDC88BA6NC98 1476 aa16.8■□□□□ 0.28
LINC00958-203ENST00000527945 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
LINC00958-203ENST00000527945 WDR62O43379 1518 aa16.78■□□□□ 0.28
LINC00958-203ENST00000527945 KIF21AQ7Z4S6 1674 aa16.78■□□□□ 0.28
LINC00958-203ENST00000527945 FANCD2Q9BXW9 1451 aa16.75■□□□□ 0.27
LINC00958-203ENST00000527945 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
LINC00958-203ENST00000527945 PRDM2Q13029 1718 aa16.72■□□□□ 0.27
LINC00958-203ENST00000527945 SUPT5HO00267 1087 aaKnown RBP16.68■□□□□ 0.26
LINC00958-203ENST00000527945 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
LINC00958-203ENST00000527945 ABCC8Q09428 1581 aa16.5■□□□□ 0.23
LINC00958-203ENST00000527945 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
LINC00958-203ENST00000527945 IFT140Q96RY7 1462 aa16.45■□□□□ 0.22
LINC00958-203ENST00000527945 DNMBPQ6XZF7 1577 aa16.38■□□□□ 0.21
LINC00958-203ENST00000527945 OSCARQ8IYS5 282 aa16.38■□□□□ 0.21
LINC00958-203ENST00000527945 SENP3Q9H4L4 574 aaPredicted RBP16.38■□□□□ 0.21
LINC00958-203ENST00000527945 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
LINC00958-203ENST00000527945 CUX1P39880 1505 aa16.33■□□□□ 0.2
LINC00958-203ENST00000527945 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
LINC00958-203ENST00000527945 TARBP1Q13395 1621 aaKnown RBP16.29■□□□□ 0.2
LINC00958-203ENST00000527945 SYNJ1O43426 1573 aa16.23■□□□□ 0.19
LINC00958-203ENST00000527945 SOGA1O94964 1423 aa16.22■□□□□ 0.19
LINC00958-203ENST00000527945 BIVM-ERCC5R4GMW8 1640 aa16.22■□□□□ 0.19
LINC00958-203ENST00000527945 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.19
LINC00958-203ENST00000527945 EIF4G3O43432 1585 aaKnown RBP16.21■□□□□ 0.19
LINC00958-203ENST00000527945 WDR97A6NE52 1622 aa16.21■□□□□ 0.19
LINC00958-203ENST00000527945 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
LINC00958-203ENST00000527945 RAD54L2Q9Y4B4 1467 aa16.18■□□□□ 0.18
LINC00958-203ENST00000527945 TOP2BQ02880 1626 aa16.18■□□□□ 0.18
LINC00958-203ENST00000527945 TDRD9Q8NDG6 1382 aaKnown RBP16.14■□□□□ 0.17
LINC00958-203ENST00000527945 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
LINC00958-203ENST00000527945 MAGI1Q96QZ7 1491 aaPredicted RBP16.1■□□□□ 0.17
LINC00958-203ENST00000527945 ABCA10Q8WWZ4 1543 aa16.09■□□□□ 0.17
LINC00958-203ENST00000527945 TRIM41Q8WV44 630 aa16.08■□□□□ 0.16
LINC00958-203ENST00000527945 GRIN2BQ13224 1484 aa16.08■□□□□ 0.16
LINC00958-203ENST00000527945 ARHGEF11O15085 1522 aa16.07■□□□□ 0.16
LINC00958-203ENST00000527945 ABCA5Q8WWZ7 1642 aa16.05■□□□□ 0.16
LINC00958-203ENST00000527945 SNAPC4Q5SXM2 1469 aa16.04■□□□□ 0.16
LINC00958-203ENST00000527945 RIMBP3CA6NJZ7 1639 aa16.03■□□□□ 0.16
LINC00958-203ENST00000527945 RIMBP3BA6NNM3 1639 aa16.03■□□□□ 0.16
LINC00958-203ENST00000527945 RIMBP3Q9UFD9 1639 aa16.03■□□□□ 0.16
LINC00958-203ENST00000527945 GAPVD1Q14C86 1478 aa16.03■□□□□ 0.16
LINC00958-203ENST00000527945 PBRM1Q86U86 1689 aa16.02■□□□□ 0.16
LINC00958-203ENST00000527945 SYNJ2O15056 1496 aa16.02■□□□□ 0.15
LINC00958-203ENST00000527945 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
LINC00958-203ENST00000527945 CHD1O14646 1710 aa15.98■□□□□ 0.15
LINC00958-203ENST00000527945 FBLN2P98095 1184 aa15.98■□□□□ 0.15
LINC00958-203ENST00000527945 CHMP7Q8WUX9 453 aaPredicted RBP15.98■□□□□ 0.15
LINC00958-203ENST00000527945 ARAP1Q96P48 1450 aa15.92■□□□□ 0.14
LINC00958-203ENST00000527945 CYB5RLQ6IPT4 315 aa15.9■□□□□ 0.14
LINC00958-203ENST00000527945 NUP160Q12769 1436 aa15.88■□□□□ 0.13
LINC00958-203ENST00000527945 ERICH3Q5RHP9 1530 aa15.88■□□□□ 0.13
LINC00958-203ENST00000527945 ADAMTS12P58397 1594 aa15.87■□□□□ 0.13
LINC00958-203ENST00000527945 FHAD1B1AJZ9 1412 aa15.87■□□□□ 0.13
LINC00958-203ENST00000527945 GRIN2AQ12879 1464 aa15.86■□□□□ 0.13
LINC00958-203ENST00000527945 PHF23Q9BUL5 403 aaPredicted RBP15.83■□□□□ 0.12
LINC00958-203ENST00000527945 RUSC2Q8N2Y8 1516 aa15.8■□□□□ 0.12
LINC00958-203ENST00000527945 KIF27Q86VH2 1401 aa15.78■□□□□ 0.12
LINC00958-203ENST00000527945 CEP170Q5SW79 1584 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms