RNA–Protein interactions for RNA: ENST00000527810.1

PGAP2-230, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 3

Gene PGAP2, Length 567 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-230ENST00000527810 NISCHQ9Y2I1 1504 aa33.42■■■□□ 2.94
PGAP2-230ENST00000527810 ABCC9O60706 1549 aa30.93■■■□□ 2.54
PGAP2-230ENST00000527810 CCDC180Q9P1Z9 1646 aa30.33■■■□□ 2.45
PGAP2-230ENST00000527810 DNAJC5BQ9UF47 199 aa29.39■■■□□ 2.3
PGAP2-230ENST00000527810 RB1CC1Q8TDY2 1594 aa29.18■■■□□ 2.26
PGAP2-230ENST00000527810 NACADO15069 1562 aa28.78■■■□□ 2.2
PGAP2-230ENST00000527810 DCAF8L2P0C7V8 631 aa28.68■■■□□ 2.18
PGAP2-230ENST00000527810 PABPN1Q86U42 306 aaKnown RBP eCLIP28.67■■■□□ 2.18
PGAP2-230ENST00000527810 UNC13AQ9UPW8 1703 aa28.53■■■□□ 2.16
PGAP2-230ENST00000527810 BICRAQ9NZM4 1560 aa28.24■■■□□ 2.11
PGAP2-230ENST00000527810 MYO15BQ96JP2 1530 aa28.08■■■□□ 2.08
PGAP2-230ENST00000527810 CECR2Q9BXF3 1484 aa27.89■■■□□ 2.06
PGAP2-230ENST00000527810 CC2D2AQ9P2K1 1620 aa27.89■■■□□ 2.06
PGAP2-230ENST00000527810 SHROOM4Q9ULL8 1493 aa27.81■■■□□ 2.04
PGAP2-230ENST00000527810 EIF4G1Q04637 1599 aaKnown RBP27.65■■■□□ 2.02
PGAP2-230ENST00000527810 SCRIBQ14160 1630 aa27.65■■■□□ 2.02
PGAP2-230ENST00000527810 ZCCHC6Q5VYS8 1495 aaKnown RBP27.56■■■□□ 2
PGAP2-230ENST00000527810 DCAF1Q9Y4B6 1507 aa27.51■■■□□ 2
PGAP2-230ENST00000527810 DNAJC5Q9H3Z4 198 aa27.48■■□□□ 1.99
PGAP2-230ENST00000527810 CUX2O14529 1486 aa26.87■■□□□ 1.89
PGAP2-230ENST00000527810 ERCC6Q03468 1493 aa26.82■■□□□ 1.88
PGAP2-230ENST00000527810 NCAPD3P42695 1498 aa26.5■■□□□ 1.83
PGAP2-230ENST00000527810 ATAD2BQ9ULI0 1458 aa26.36■■□□□ 1.81
PGAP2-230ENST00000527810 NESP48681 1621 aa26.36■■□□□ 1.81
PGAP2-230ENST00000527810 SMARCA2P51531 1590 aa26.33■■□□□ 1.81
PGAP2-230ENST00000527810 HMGXB3Q12766 1538 aa26.31■■□□□ 1.8
PGAP2-230ENST00000527810 SMARCA4P51532 1647 aa26.25■■□□□ 1.79
PGAP2-230ENST00000527810 THOC2Q8NI27 1593 aaKnown RBP26.21■■□□□ 1.79
PGAP2-230ENST00000527810 TRIM41Q8WV44 630 aa26.21■■□□□ 1.79
PGAP2-230ENST00000527810 BAZ1BQ9UIG0 1483 aaKnown RBP26.17■■□□□ 1.78
PGAP2-230ENST00000527810 LAMC3Q9Y6N6 1575 aa26.1■■□□□ 1.77
PGAP2-230ENST00000527810 KIF21AQ7Z4S6 1674 aa26.08■■□□□ 1.77
PGAP2-230ENST00000527810 BAZ1AQ9NRL2 1556 aaPredicted RBP26.03■■□□□ 1.76
PGAP2-230ENST00000527810 PDS5BQ9NTI5 1447 aa25.97■■□□□ 1.75
PGAP2-230ENST00000527810 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
PGAP2-230ENST00000527810 MRC2Q9UBG0 1479 aa25.78■■□□□ 1.72
PGAP2-230ENST00000527810 MROH2BQ7Z745 1585 aa25.75■■□□□ 1.71
PGAP2-230ENST00000527810 CADPSQ9ULU8 1353 aa25.7■■□□□ 1.71
PGAP2-230ENST00000527810 WDR62O43379 1518 aa25.69■■□□□ 1.7
PGAP2-230ENST00000527810 CEP164Q9UPV0 1460 aa25.6■■□□□ 1.69
PGAP2-230ENST00000527810 OSCARQ8IYS5 282 aa25.56■■□□□ 1.68
PGAP2-230ENST00000527810 WIZO95785 1651 aa25.48■■□□□ 1.67
PGAP2-230ENST00000527810 FANCD2Q9BXW9 1451 aa25.47■■□□□ 1.67
PGAP2-230ENST00000527810 RIMBP3CA6NJZ7 1639 aa25.33■■□□□ 1.65
PGAP2-230ENST00000527810 RIMBP3BA6NNM3 1639 aa25.33■■□□□ 1.65
PGAP2-230ENST00000527810 RIMBP3Q9UFD9 1639 aa25.33■■□□□ 1.65
PGAP2-230ENST00000527810 CFTRP13569 1480 aa25.27■■□□□ 1.64
PGAP2-230ENST00000527810 URB2Q14146 1524 aaKnown RBP25.26■■□□□ 1.63
PGAP2-230ENST00000527810 ARHGEF11O15085 1522 aa25.14■■□□□ 1.62
PGAP2-230ENST00000527810 PRDM2Q13029 1718 aa25.14■■□□□ 1.61
PGAP2-230ENST00000527810 TOP2AP11388 1531 aaKnown RBP25.09■■□□□ 1.61
PGAP2-230ENST00000527810 TRHP20396 242 aaPredicted RBP25.06■■□□□ 1.6
PGAP2-230ENST00000527810 IFT140Q96RY7 1462 aa25.06■■□□□ 1.6
PGAP2-230ENST00000527810 ZNF608Q9ULD9 1512 aaPredicted RBP25.05■■□□□ 1.6
PGAP2-230ENST00000527810 CYB5RLQ6IPT4 315 aa25.04■■□□□ 1.6
PGAP2-230ENST00000527810 RSF1Q96T23 1441 aaPredicted RBP24.96■■□□□ 1.59
PGAP2-230ENST00000527810 EIF4G3O43432 1585 aaKnown RBP24.95■■□□□ 1.58
PGAP2-230ENST00000527810 CHD1O14646 1710 aa24.93■■□□□ 1.58
PGAP2-230ENST00000527810 TOPBP1Q92547 1522 aa24.91■■□□□ 1.58
PGAP2-230ENST00000527810 FBLN2P98095 1184 aa24.87■■□□□ 1.57
PGAP2-230ENST00000527810 ABCC8Q09428 1581 aa24.84■■□□□ 1.57
PGAP2-230ENST00000527810 AEBP2Q6ZN18 517 aaPredicted RBP24.83■■□□□ 1.57
PGAP2-230ENST00000527810 ARAP1Q96P48 1450 aa24.83■■□□□ 1.56
PGAP2-230ENST00000527810 DNMBPQ6XZF7 1577 aa24.79■■□□□ 1.56
PGAP2-230ENST00000527810 CCDC88BA6NC98 1476 aa24.78■■□□□ 1.56
PGAP2-230ENST00000527810 AQRO60306 1485 aaKnown RBP eCLIP24.77■■□□□ 1.56
PGAP2-230ENST00000527810 TARBP1Q13395 1621 aaKnown RBP24.71■■□□□ 1.55
PGAP2-230ENST00000527810 POLA1P09884 1462 aaPredicted RBP24.6■■□□□ 1.53
PGAP2-230ENST00000527810 SYNJ1O43426 1573 aa24.54■■□□□ 1.52
PGAP2-230ENST00000527810 SNAPC4Q5SXM2 1469 aa24.53■■□□□ 1.52
PGAP2-230ENST00000527810 RAD54L2Q9Y4B4 1467 aa24.53■■□□□ 1.52
PGAP2-230ENST00000527810 CHMP7Q8WUX9 453 aaPredicted RBP24.53■■□□□ 1.52
PGAP2-230ENST00000527810 TDRD9Q8NDG6 1382 aaKnown RBP24.53■■□□□ 1.52
PGAP2-230ENST00000527810 SOGA1O94964 1423 aa24.51■■□□□ 1.51
PGAP2-230ENST00000527810 CLASP1Q7Z460 1538 aa24.51■■□□□ 1.51
PGAP2-230ENST00000527810 WDR97A6NE52 1622 aa24.45■■□□□ 1.5
PGAP2-230ENST00000527810 MAGI1Q96QZ7 1491 aaPredicted RBP24.42■■□□□ 1.5
PGAP2-230ENST00000527810 FGD5Q6ZNL6 1462 aa24.39■■□□□ 1.5
PGAP2-230ENST00000527810 GRIN2BQ13224 1484 aa24.37■■□□□ 1.49
PGAP2-230ENST00000527810 SYNJ2O15056 1496 aa24.34■■□□□ 1.49
PGAP2-230ENST00000527810 GAPVD1Q14C86 1478 aa24.34■■□□□ 1.49
PGAP2-230ENST00000527810 PBRM1Q86U86 1689 aa24.32■■□□□ 1.48
PGAP2-230ENST00000527810 CUX1P39880 1505 aa24.24■■□□□ 1.47
PGAP2-230ENST00000527810 ERCC6L2Q5T890 1561 aa24.1■■□□□ 1.45
PGAP2-230ENST00000527810 ABCA5Q8WWZ7 1642 aa24.09■■□□□ 1.45
PGAP2-230ENST00000527810 GRIN2AQ12879 1464 aa24.04■■□□□ 1.44
PGAP2-230ENST00000527810 ABCA10Q8WWZ4 1543 aa24.04■■□□□ 1.44
PGAP2-230ENST00000527810 CEP170Q5SW79 1584 aa24.03■■□□□ 1.44
PGAP2-230ENST00000527810 KIF13AQ9H1H9 1805 aa24.01■■□□□ 1.43
PGAP2-230ENST00000527810 ADAMTS12P58397 1594 aa23.97■■□□□ 1.43
PGAP2-230ENST00000527810 SHROOM2Q13796 1616 aa23.92■■□□□ 1.42
PGAP2-230ENST00000527810 NUP160Q12769 1436 aa23.92■■□□□ 1.42
PGAP2-230ENST00000527810 WRNQ14191 1432 aaPredicted RBP eCLIP23.87■■□□□ 1.41
PGAP2-230ENST00000527810 FHAD1B1AJZ9 1412 aa23.85■■□□□ 1.41
PGAP2-230ENST00000527810 NPM1P06748 294 aaKnown RBP eCLIP23.84■■□□□ 1.41
PGAP2-230ENST00000527810 FAM69CQ0P6D2 419 aa23.83■■□□□ 1.41
PGAP2-230ENST00000527810 PRG4Q92954 1404 aaPredicted RBP23.82■■□□□ 1.4
PGAP2-230ENST00000527810 ERICH3Q5RHP9 1530 aa23.75■■□□□ 1.39
PGAP2-230ENST00000527810 KDM6BO15054 1643 aa23.75■■□□□ 1.39
PGAP2-230ENST00000527810 ABCC10Q5T3U5 1492 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms