RNA–Protein interactions for RNA: ENST00000527742.1

GLI1-202, Transcript of GLI family zinc finger 1, humanhuman

TSL 3

Gene GLI1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI1-202ENST00000527742 NISCHQ9Y2I1 1504 aa24.66■■□□□ 1.54
GLI1-202ENST00000527742 ABCC9O60706 1549 aa23.12■■□□□ 1.29
GLI1-202ENST00000527742 CCDC180Q9P1Z9 1646 aa22.46■■□□□ 1.19
GLI1-202ENST00000527742 DNAJC5BQ9UF47 199 aa22.38■■□□□ 1.17
GLI1-202ENST00000527742 RB1CC1Q8TDY2 1594 aa21.71■■□□□ 1.07
GLI1-202ENST00000527742 NACADO15069 1562 aa21.4■■□□□ 1.02
GLI1-202ENST00000527742 PABPN1Q86U42 306 aaKnown RBP eCLIP21.39■■□□□ 1.01
GLI1-202ENST00000527742 UNC13AQ9UPW8 1703 aa21.24■□□□□ 0.99
GLI1-202ENST00000527742 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.98
GLI1-202ENST00000527742 DNAJC5Q9H3Z4 198 aa21.09■□□□□ 0.97
GLI1-202ENST00000527742 DCAF8L2P0C7V8 631 aa21.02■□□□□ 0.96
GLI1-202ENST00000527742 CECR2Q9BXF3 1484 aa20.92■□□□□ 0.94
GLI1-202ENST00000527742 MYO15BQ96JP2 1530 aa20.91■□□□□ 0.94
GLI1-202ENST00000527742 CC2D2AQ9P2K1 1620 aa20.87■□□□□ 0.93
GLI1-202ENST00000527742 SHROOM4Q9ULL8 1493 aa20.79■□□□□ 0.92
GLI1-202ENST00000527742 EIF4G1Q04637 1599 aaKnown RBP20.66■□□□□ 0.9
GLI1-202ENST00000527742 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
GLI1-202ENST00000527742 SCRIBQ14160 1630 aa20.35■□□□□ 0.85
GLI1-202ENST00000527742 ZCCHC6Q5VYS8 1495 aaKnown RBP20.28■□□□□ 0.84
GLI1-202ENST00000527742 CUX2O14529 1486 aa20.27■□□□□ 0.84
GLI1-202ENST00000527742 ERCC6Q03468 1493 aa19.99■□□□□ 0.79
GLI1-202ENST00000527742 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
GLI1-202ENST00000527742 TRIM41Q8WV44 630 aa19.77■□□□□ 0.76
GLI1-202ENST00000527742 NESP48681 1621 aa19.66■□□□□ 0.74
GLI1-202ENST00000527742 THOC2Q8NI27 1593 aaKnown RBP19.64■□□□□ 0.73
GLI1-202ENST00000527742 ATAD2BQ9ULI0 1458 aa19.6■□□□□ 0.73
GLI1-202ENST00000527742 HMGXB3Q12766 1538 aa19.56■□□□□ 0.72
GLI1-202ENST00000527742 SMARCA2P51531 1590 aa19.49■□□□□ 0.71
GLI1-202ENST00000527742 LAMC3Q9Y6N6 1575 aa19.44■□□□□ 0.7
GLI1-202ENST00000527742 KIF21AQ7Z4S6 1674 aa19.4■□□□□ 0.7
GLI1-202ENST00000527742 SMARCA4P51532 1647 aa19.39■□□□□ 0.69
GLI1-202ENST00000527742 BAZ1BQ9UIG0 1483 aaKnown RBP19.34■□□□□ 0.69
GLI1-202ENST00000527742 PDS5BQ9NTI5 1447 aa19.34■□□□□ 0.69
GLI1-202ENST00000527742 PEG3Q9GZU2 1588 aa19.25■□□□□ 0.67
GLI1-202ENST00000527742 BAZ1AQ9NRL2 1556 aaPredicted RBP19.25■□□□□ 0.67
GLI1-202ENST00000527742 WDR62O43379 1518 aa19.2■□□□□ 0.66
GLI1-202ENST00000527742 MRC2Q9UBG0 1479 aa19.2■□□□□ 0.66
GLI1-202ENST00000527742 OSCARQ8IYS5 282 aa19.19■□□□□ 0.66
GLI1-202ENST00000527742 CADPSQ9ULU8 1353 aa19.12■□□□□ 0.65
GLI1-202ENST00000527742 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
GLI1-202ENST00000527742 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
GLI1-202ENST00000527742 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
GLI1-202ENST00000527742 MROH2BQ7Z745 1585 aa18.98■□□□□ 0.63
GLI1-202ENST00000527742 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
GLI1-202ENST00000527742 ARHGEF11O15085 1522 aa18.9■□□□□ 0.62
GLI1-202ENST00000527742 FANCD2Q9BXW9 1451 aa18.89■□□□□ 0.61
GLI1-202ENST00000527742 URB2Q14146 1524 aaKnown RBP18.79■□□□□ 0.6
GLI1-202ENST00000527742 CYB5RLQ6IPT4 315 aa18.77■□□□□ 0.6
GLI1-202ENST00000527742 CFTRP13569 1480 aa18.77■□□□□ 0.59
GLI1-202ENST00000527742 TRHP20396 242 aaPredicted RBP18.76■□□□□ 0.59
GLI1-202ENST00000527742 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
GLI1-202ENST00000527742 WIZO95785 1651 aa18.71■□□□□ 0.59
GLI1-202ENST00000527742 ZNF608Q9ULD9 1512 aaPredicted RBP18.67■□□□□ 0.58
GLI1-202ENST00000527742 ARAP1Q96P48 1450 aa18.66■□□□□ 0.58
GLI1-202ENST00000527742 IFT140Q96RY7 1462 aa18.64■□□□□ 0.57
GLI1-202ENST00000527742 RSF1Q96T23 1441 aaPredicted RBP18.56■□□□□ 0.56
GLI1-202ENST00000527742 CHD1O14646 1710 aa18.53■□□□□ 0.56
GLI1-202ENST00000527742 EIF4G3O43432 1585 aaKnown RBP18.53■□□□□ 0.56
GLI1-202ENST00000527742 PRDM2Q13029 1718 aa18.52■□□□□ 0.55
GLI1-202ENST00000527742 SUPT5HO00267 1087 aaKnown RBP18.47■□□□□ 0.55
GLI1-202ENST00000527742 TOPBP1Q92547 1522 aa18.46■□□□□ 0.55
GLI1-202ENST00000527742 TOP2AP11388 1531 aaKnown RBP18.43■□□□□ 0.54
GLI1-202ENST00000527742 AQRO60306 1485 aaKnown RBP eCLIP18.4■□□□□ 0.54
GLI1-202ENST00000527742 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
GLI1-202ENST00000527742 TARBP1Q13395 1621 aaKnown RBP18.38■□□□□ 0.53
GLI1-202ENST00000527742 FBLN2P98095 1184 aa18.37■□□□□ 0.53
GLI1-202ENST00000527742 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.53
GLI1-202ENST00000527742 DNMBPQ6XZF7 1577 aa18.33■□□□□ 0.52
GLI1-202ENST00000527742 CCDC88BA6NC98 1476 aa18.23■□□□□ 0.51
GLI1-202ENST00000527742 POLA1P09884 1462 aaPredicted RBP18.23■□□□□ 0.51
GLI1-202ENST00000527742 SYNJ1O43426 1573 aa18.22■□□□□ 0.51
GLI1-202ENST00000527742 SNAPC4Q5SXM2 1469 aa18.19■□□□□ 0.5
GLI1-202ENST00000527742 GAPVD1Q14C86 1478 aa18.16■□□□□ 0.5
GLI1-202ENST00000527742 TDRD9Q8NDG6 1382 aaKnown RBP18.16■□□□□ 0.5
GLI1-202ENST00000527742 RAD54L2Q9Y4B4 1467 aa18.15■□□□□ 0.5
GLI1-202ENST00000527742 CHMP7Q8WUX9 453 aaPredicted RBP18.15■□□□□ 0.5
GLI1-202ENST00000527742 WDR97A6NE52 1622 aa18.15■□□□□ 0.5
GLI1-202ENST00000527742 MAGI1Q96QZ7 1491 aaPredicted RBP18.14■□□□□ 0.49
GLI1-202ENST00000527742 SOGA1O94964 1423 aa18.12■□□□□ 0.49
GLI1-202ENST00000527742 ILDR1Q86SU0 546 aaPredicted RBP18.1■□□□□ 0.49
GLI1-202ENST00000527742 SYNJ2O15056 1496 aa18.08■□□□□ 0.49
GLI1-202ENST00000527742 GRIN2BQ13224 1484 aa18.05■□□□□ 0.48
GLI1-202ENST00000527742 KIF13AQ9H1H9 1805 aa18■□□□□ 0.47
GLI1-202ENST00000527742 FGD5Q6ZNL6 1462 aa17.99■□□□□ 0.47
GLI1-202ENST00000527742 ERCC6L2Q5T890 1561 aa17.97■□□□□ 0.47
GLI1-202ENST00000527742 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
GLI1-202ENST00000527742 KDM4FA0A1W2PPD8 638 aa17.91■□□□□ 0.46
GLI1-202ENST00000527742 CUX1P39880 1505 aa17.88■□□□□ 0.45
GLI1-202ENST00000527742 CEP170Q5SW79 1584 aa17.87■□□□□ 0.45
GLI1-202ENST00000527742 SHROOM2Q13796 1616 aa17.83■□□□□ 0.44
GLI1-202ENST00000527742 GRIN2AQ12879 1464 aa17.82■□□□□ 0.44
GLI1-202ENST00000527742 ABCA5Q8WWZ7 1642 aa17.81■□□□□ 0.44
GLI1-202ENST00000527742 NUP160Q12769 1436 aa17.81■□□□□ 0.44
GLI1-202ENST00000527742 ABCC10Q5T3U5 1492 aa17.79■□□□□ 0.44
GLI1-202ENST00000527742 ABCA10Q8WWZ4 1543 aa17.77■□□□□ 0.44
GLI1-202ENST00000527742 FAM69CQ0P6D2 419 aa17.77■□□□□ 0.44
GLI1-202ENST00000527742 KDM6BO15054 1643 aa17.74■□□□□ 0.43
GLI1-202ENST00000527742 CHIC1Q5VXU3 224 aa17.74■□□□□ 0.43
GLI1-202ENST00000527742 DIP2BQ9P265 1576 aa17.72■□□□□ 0.43
GLI1-202ENST00000527742 ADAMTS12P58397 1594 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms