RNA–Protein interactions for RNA: ENST00000527710.5

LETM2-213, Transcript of leucine zipper and EF-hand containing transmembrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LETM2, Length 1,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM2-213ENST00000527710 NISCHQ9Y2I1 1504 aa24.61■■□□□ 1.53
LETM2-213ENST00000527710 AEBP2Q6ZN18 517 aaPredicted RBP22.82■■□□□ 1.24
LETM2-213ENST00000527710 CCDC180Q9P1Z9 1646 aa21.87■■□□□ 1.09
LETM2-213ENST00000527710 ABCC9O60706 1549 aa21.83■■□□□ 1.09
LETM2-213ENST00000527710 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
LETM2-213ENST00000527710 DCAF8L2P0C7V8 631 aa20.92■□□□□ 0.94
LETM2-213ENST00000527710 RB1CC1Q8TDY2 1594 aa20.79■□□□□ 0.92
LETM2-213ENST00000527710 NACADO15069 1562 aa20.66■□□□□ 0.9
LETM2-213ENST00000527710 MYO15BQ96JP2 1530 aa20.56■□□□□ 0.88
LETM2-213ENST00000527710 ZCCHC6Q5VYS8 1495 aaKnown RBP20.47■□□□□ 0.87
LETM2-213ENST00000527710 DCAF1Q9Y4B6 1507 aa20.46■□□□□ 0.87
LETM2-213ENST00000527710 PABPN1Q86U42 306 aaKnown RBP eCLIP20.41■□□□□ 0.86
LETM2-213ENST00000527710 UNC13AQ9UPW8 1703 aa20.32■□□□□ 0.84
LETM2-213ENST00000527710 DNAJC5BQ9UF47 199 aa20.26■□□□□ 0.83
LETM2-213ENST00000527710 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
LETM2-213ENST00000527710 SCRIBQ14160 1630 aa20.05■□□□□ 0.8
LETM2-213ENST00000527710 SHROOM4Q9ULL8 1493 aa19.84■□□□□ 0.77
LETM2-213ENST00000527710 CC2D2AQ9P2K1 1620 aa19.67■□□□□ 0.74
LETM2-213ENST00000527710 EIF4G1Q04637 1599 aaKnown RBP19.64■□□□□ 0.73
LETM2-213ENST00000527710 CECR2Q9BXF3 1484 aa19.6■□□□□ 0.73
LETM2-213ENST00000527710 SENP3Q9H4L4 574 aaPredicted RBP19.29■□□□□ 0.68
LETM2-213ENST00000527710 BAZ1AQ9NRL2 1556 aaPredicted RBP19.1■□□□□ 0.65
LETM2-213ENST00000527710 SMARCA4P51532 1647 aa19.07■□□□□ 0.64
LETM2-213ENST00000527710 PHF23Q9BUL5 403 aaPredicted RBP19.05■□□□□ 0.64
LETM2-213ENST00000527710 NCAPD3P42695 1498 aa19.04■□□□□ 0.64
LETM2-213ENST00000527710 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
LETM2-213ENST00000527710 SMARCA2P51531 1590 aa19.02■□□□□ 0.63
LETM2-213ENST00000527710 BAZ1BQ9UIG0 1483 aaKnown RBP18.92■□□□□ 0.62
LETM2-213ENST00000527710 PEG3Q9GZU2 1588 aa18.91■□□□□ 0.62
LETM2-213ENST00000527710 HMGXB3Q12766 1538 aa18.9■□□□□ 0.62
LETM2-213ENST00000527710 MROH2BQ7Z745 1585 aa18.88■□□□□ 0.61
LETM2-213ENST00000527710 ERCC6Q03468 1493 aa18.87■□□□□ 0.61
LETM2-213ENST00000527710 RSF1Q96T23 1441 aaPredicted RBP18.76■□□□□ 0.59
LETM2-213ENST00000527710 NESP48681 1621 aa18.76■□□□□ 0.59
LETM2-213ENST00000527710 WIZO95785 1651 aa18.72■□□□□ 0.59
LETM2-213ENST00000527710 CUX2O14529 1486 aa18.65■□□□□ 0.58
LETM2-213ENST00000527710 LAMC3Q9Y6N6 1575 aa18.62■□□□□ 0.57
LETM2-213ENST00000527710 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
LETM2-213ENST00000527710 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
LETM2-213ENST00000527710 KIF21AQ7Z4S6 1674 aa18.53■□□□□ 0.56
LETM2-213ENST00000527710 CADPSQ9ULU8 1353 aa18.53■□□□□ 0.56
LETM2-213ENST00000527710 DNAJC5Q9H3Z4 198 aa18.5■□□□□ 0.55
LETM2-213ENST00000527710 THOC2Q8NI27 1593 aaKnown RBP18.46■□□□□ 0.55
LETM2-213ENST00000527710 MRC2Q9UBG0 1479 aa18.35■□□□□ 0.53
LETM2-213ENST00000527710 CEP164Q9UPV0 1460 aa18.35■□□□□ 0.53
LETM2-213ENST00000527710 SUPT5HO00267 1087 aaKnown RBP18.35■□□□□ 0.53
LETM2-213ENST00000527710 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.53
LETM2-213ENST00000527710 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.52
LETM2-213ENST00000527710 CFTRP13569 1480 aa18.33■□□□□ 0.52
LETM2-213ENST00000527710 WDR62O43379 1518 aa18.25■□□□□ 0.51
LETM2-213ENST00000527710 PRDM2Q13029 1718 aa18.19■□□□□ 0.5
LETM2-213ENST00000527710 FOXD1Q16676 465 aa18.19■□□□□ 0.5
LETM2-213ENST00000527710 URB2Q14146 1524 aaKnown RBP18.13■□□□□ 0.49
LETM2-213ENST00000527710 ABCC8Q09428 1581 aa18.07■□□□□ 0.48
LETM2-213ENST00000527710 TOPBP1Q92547 1522 aa17.98■□□□□ 0.47
LETM2-213ENST00000527710 OSCARQ8IYS5 282 aa17.96■□□□□ 0.47
LETM2-213ENST00000527710 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
LETM2-213ENST00000527710 TRIM41Q8WV44 630 aa17.94■□□□□ 0.46
LETM2-213ENST00000527710 DNMBPQ6XZF7 1577 aa17.93■□□□□ 0.46
LETM2-213ENST00000527710 ZNF608Q9ULD9 1512 aaPredicted RBP17.9■□□□□ 0.46
LETM2-213ENST00000527710 FBLN2P98095 1184 aa17.82■□□□□ 0.44
LETM2-213ENST00000527710 AQRO60306 1485 aaKnown RBP eCLIP17.81■□□□□ 0.44
LETM2-213ENST00000527710 SOGA1O94964 1423 aa17.81■□□□□ 0.44
LETM2-213ENST00000527710 EIF4G3O43432 1585 aaKnown RBP17.8■□□□□ 0.44
LETM2-213ENST00000527710 POLA1P09884 1462 aaPredicted RBP17.8■□□□□ 0.44
LETM2-213ENST00000527710 RAD54L2Q9Y4B4 1467 aa17.79■□□□□ 0.44
LETM2-213ENST00000527710 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
LETM2-213ENST00000527710 TDRD9Q8NDG6 1382 aaKnown RBP17.75■□□□□ 0.43
LETM2-213ENST00000527710 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
LETM2-213ENST00000527710 WRNQ14191 1432 aaPredicted RBP eCLIP17.73■□□□□ 0.43
LETM2-213ENST00000527710 CUX1P39880 1505 aa17.72■□□□□ 0.43
LETM2-213ENST00000527710 CHD1O14646 1710 aa17.69■□□□□ 0.42
LETM2-213ENST00000527710 WDR97A6NE52 1622 aa17.66■□□□□ 0.42
LETM2-213ENST00000527710 CHMP7Q8WUX9 453 aaPredicted RBP17.65■□□□□ 0.42
LETM2-213ENST00000527710 POTEDQ86YR6 584 aa17.64■□□□□ 0.41
LETM2-213ENST00000527710 TOP2BQ02880 1626 aa17.64■□□□□ 0.41
LETM2-213ENST00000527710 RIMBP3CA6NJZ7 1639 aa17.62■□□□□ 0.41
LETM2-213ENST00000527710 RIMBP3BA6NNM3 1639 aa17.62■□□□□ 0.41
LETM2-213ENST00000527710 RIMBP3Q9UFD9 1639 aa17.62■□□□□ 0.41
LETM2-213ENST00000527710 SNAPC4Q5SXM2 1469 aa17.62■□□□□ 0.41
LETM2-213ENST00000527710 BIVM-ERCC5R4GMW8 1640 aa17.6■□□□□ 0.41
LETM2-213ENST00000527710 GRIN2BQ13224 1484 aa17.58■□□□□ 0.41
LETM2-213ENST00000527710 CYB5RLQ6IPT4 315 aa17.58■□□□□ 0.4
LETM2-213ENST00000527710 ARHGEF11O15085 1522 aa17.57■□□□□ 0.4
LETM2-213ENST00000527710 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
LETM2-213ENST00000527710 GAPVD1Q14C86 1478 aa17.56■□□□□ 0.4
LETM2-213ENST00000527710 PBRM1Q86U86 1689 aa17.55■□□□□ 0.4
LETM2-213ENST00000527710 MAGI1Q96QZ7 1491 aaPredicted RBP17.53■□□□□ 0.4
LETM2-213ENST00000527710 SYNJ1O43426 1573 aa17.53■□□□□ 0.4
LETM2-213ENST00000527710 SYNJ2O15056 1496 aa17.49■□□□□ 0.39
LETM2-213ENST00000527710 ABCA5Q8WWZ7 1642 aa17.45■□□□□ 0.38
LETM2-213ENST00000527710 KIF27Q86VH2 1401 aa17.41■□□□□ 0.38
LETM2-213ENST00000527710 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
LETM2-213ENST00000527710 ARAP1Q96P48 1450 aa17.39■□□□□ 0.37
LETM2-213ENST00000527710 ERICH3Q5RHP9 1530 aa17.38■□□□□ 0.37
LETM2-213ENST00000527710 CLASP1Q7Z460 1538 aa17.38■□□□□ 0.37
LETM2-213ENST00000527710 ADAMTS12P58397 1594 aa17.33■□□□□ 0.37
LETM2-213ENST00000527710 GRIN2AQ12879 1464 aa17.33■□□□□ 0.37
LETM2-213ENST00000527710 FHAD1B1AJZ9 1412 aa17.33■□□□□ 0.36
LETM2-213ENST00000527710 IGF1RP08069 1367 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms